RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 OR5D16Q8NGK9 328 aa19.03■□□□□ 0.64
PPP1R3F-201ENST00000055335 C1QTNF6Q9BXI9 259 aa19.03■□□□□ 0.64
PPP1R3F-201ENST00000055335 SAP130Q9H0E3 1048 aa19.03■□□□□ 0.64
PPP1R3F-201ENST00000055335 PTGFRNQ9P2B2 879 aa19.03■□□□□ 0.64
PPP1R3F-201ENST00000055335 POLHQ9Y253 713 aa19.03■□□□□ 0.64
PPP1R3F-201ENST00000055335 HTTP42858 3142 aa19.03■□□□□ 0.64
PPP1R3F-201ENST00000055335 SHISA3A0PJX4 238 aa19.03■□□□□ 0.64
PPP1R3F-201ENST00000055335 RFPL3O75679 317 aa19.03■□□□□ 0.64
PPP1R3F-201ENST00000055335 BUD31P41223 144 aaPredicted RBP19.03■□□□□ 0.64
PPP1R3F-201ENST00000055335 ARHGEF6Q15052 776 aa19.03■□□□□ 0.64
PPP1R3F-201ENST00000055335 ZBTB37Q5TC79 503 aa19.03■□□□□ 0.64
PPP1R3F-201ENST00000055335 ZNF680Q8NEM1 530 aa19.03■□□□□ 0.64
PPP1R3F-201ENST00000055335 OR4K5Q8NGD3 323 aa19.03■□□□□ 0.64
PPP1R3F-201ENST00000055335 SENP5Q96HI0 755 aaPredicted RBP19.03■□□□□ 0.64
PPP1R3F-201ENST00000055335 TMEM43Q9BTV4 400 aa19.03■□□□□ 0.64
PPP1R3F-201ENST00000055335 ZFR2Q9UPR6 939 aaKnown RBP19.03■□□□□ 0.64
PPP1R3F-201ENST00000055335 ALPPL2P10696 532 aa19.02■□□□□ 0.64
PPP1R3F-201ENST00000055335 CTSCP53634 463 aa19.02■□□□□ 0.64
PPP1R3F-201ENST00000055335 C9orf131Q5VYM1 1079 aa19.02■□□□□ 0.64
PPP1R3F-201ENST00000055335 C9orf62Q8N4C0 152 aa19.02■□□□□ 0.64
PPP1R3F-201ENST00000055335 DCAF4L2Q8NA75 395 aa19.02■□□□□ 0.64
PPP1R3F-201ENST00000055335 OR2AP1Q8NGE2 309 aa19.02■□□□□ 0.64
PPP1R3F-201ENST00000055335 PLA2G12AQ9BZM1 189 aa19.02■□□□□ 0.64
PPP1R3F-201ENST00000055335 PPP1R3EQ9H7J1 279 aa19.02■□□□□ 0.64
PPP1R3F-201ENST00000055335 KLHL1Q9NR64 748 aa19.02■□□□□ 0.64
PPP1R3F-201ENST00000055335 MMP11P24347 488 aa19.02■□□□□ 0.64
PPP1R3F-201ENST00000055335 IMPA1P29218 277 aa19.02■□□□□ 0.64
PPP1R3F-201ENST00000055335 ETV3P41162 512 aa19.02■□□□□ 0.64
PPP1R3F-201ENST00000055335 SPNS1Q9H2V7 528 aa19.02■□□□□ 0.64
PPP1R3F-201ENST00000055335 PCP4L1A6NKN8 68 aa19.02■□□□□ 0.63
PPP1R3F-201ENST00000055335 H0YIV9 168 aa19.02■□□□□ 0.63
PPP1R3F-201ENST00000055335 PROM1O43490 865 aa19.02■□□□□ 0.63
PPP1R3F-201ENST00000055335 FRS3O43559 492 aa19.02■□□□□ 0.63
PPP1R3F-201ENST00000055335 COX10Q12887 443 aa19.02■□□□□ 0.63
PPP1R3F-201ENST00000055335 GPR176Q14439 515 aa19.02■□□□□ 0.63
PPP1R3F-201ENST00000055335 LINC01599Q8WXQ3 324 aa19.02■□□□□ 0.63
PPP1R3F-201ENST00000055335 SCRN2Q96FV2 425 aa19.02■□□□□ 0.63
PPP1R3F-201ENST00000055335 GPA33Q99795 319 aa19.02■□□□□ 0.63
PPP1R3F-201ENST00000055335 SUV39H2Q9H5I1 410 aa19.02■□□□□ 0.63
PPP1R3F-201ENST00000055335 CNIH4Q9P003 139 aa19.02■□□□□ 0.63
PPP1R3F-201ENST00000055335 EIF3KQ9UBQ5 218 aaKnown RBP19.02■□□□□ 0.63
PPP1R3F-201ENST00000055335 DIMT1Q9UNQ2 313 aaKnown RBP19.02■□□□□ 0.63
PPP1R3F-201ENST00000055335 SERPIND1P05546 499 aa19.01■□□□□ 0.63
PPP1R3F-201ENST00000055335 ELK1P19419 428 aa19.01■□□□□ 0.63
PPP1R3F-201ENST00000055335 EVX1P49640 407 aa19.01■□□□□ 0.63
PPP1R3F-201ENST00000055335 SYPL1Q16563 259 aa19.01■□□□□ 0.63
PPP1R3F-201ENST00000055335 IDO2Q6ZQW0 420 aa19.01■□□□□ 0.63
PPP1R3F-201ENST00000055335 CHMP1BQ7LBR1 199 aa19.01■□□□□ 0.63
PPP1R3F-201ENST00000055335 ZER1Q7Z7L7 766 aa19.01■□□□□ 0.63
PPP1R3F-201ENST00000055335 GRAMD2AQ8IUY3 354 aa19.01■□□□□ 0.63
PPP1R3F-201ENST00000055335 LSMEM1Q8N8F7 131 aa19.01■□□□□ 0.63
PPP1R3F-201ENST00000055335 CEP76Q8TAP6 659 aa19.01■□□□□ 0.63
PPP1R3F-201ENST00000055335 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.01■□□□□ 0.63
PPP1R3F-201ENST00000055335 TMEM38AQ9H6F2 299 aa19.01■□□□□ 0.63
PPP1R3F-201ENST00000055335 ITM2BQ9Y287 266 aa19.01■□□□□ 0.63
PPP1R3F-201ENST00000055335 DDCP20711 480 aa19.01■□□□□ 0.63
PPP1R3F-201ENST00000055335 NNMTP40261 264 aa19.01■□□□□ 0.63
PPP1R3F-201ENST00000055335 MTNR1AP48039 350 aa19.01■□□□□ 0.63
PPP1R3F-201ENST00000055335 LMAN2Q12907 356 aa19.01■□□□□ 0.63
PPP1R3F-201ENST00000055335 TIGD3Q6B0B8 471 aa19.01■□□□□ 0.63
PPP1R3F-201ENST00000055335 COMMD7Q86VX2 200 aa19.01■□□□□ 0.63
PPP1R3F-201ENST00000055335 KLBQ86Z14 1044 aa19.01■□□□□ 0.63
PPP1R3F-201ENST00000055335 FBXL6Q8N531 539 aa19.01■□□□□ 0.63
PPP1R3F-201ENST00000055335 DNAJA4Q8WW22 397 aaPredicted RBP19.01■□□□□ 0.63
PPP1R3F-201ENST00000055335 FCRL1Q96LA6 429 aa19.01■□□□□ 0.63
PPP1R3F-201ENST00000055335 TEFMQ96QE5 360 aaKnown RBP19.01■□□□□ 0.63
PPP1R3F-201ENST00000055335 RSPO3Q9BXY4 272 aaPredicted RBP19.01■□□□□ 0.63
PPP1R3F-201ENST00000055335 ENAMQ9NRM1 1142 aa19.01■□□□□ 0.63
PPP1R3F-201ENST00000055335 NUPL2O15504 423 aaKnown RBP19■□□□□ 0.63
PPP1R3F-201ENST00000055335 TBPL1P62380 186 aa19■□□□□ 0.63
PPP1R3F-201ENST00000055335 EEF1A2Q05639 463 aaKnown RBP19■□□□□ 0.63
PPP1R3F-201ENST00000055335 SF3A2Q15428 464 aaKnown RBP19■□□□□ 0.63
PPP1R3F-201ENST00000055335 CDKL4Q5MAI5 379 aa19■□□□□ 0.63
PPP1R3F-201ENST00000055335 FAAH2Q6GMR7 532 aa19■□□□□ 0.63
PPP1R3F-201ENST00000055335 FAM181AQ8N9Y4 354 aa19■□□□□ 0.63
PPP1R3F-201ENST00000055335 ZFP3Q96NJ6 502 aa19■□□□□ 0.63
PPP1R3F-201ENST00000055335 ATF6BQ99941 703 aa19■□□□□ 0.63
PPP1R3F-201ENST00000055335 ARHGAP39Q9C0H5 1083 aa19■□□□□ 0.63
PPP1R3F-201ENST00000055335 MCOLN1Q9GZU1 580 aa19■□□□□ 0.63
PPP1R3F-201ENST00000055335 FBXW2Q9UKT8 454 aa19■□□□□ 0.63
PPP1R3F-201ENST00000055335 TEX46H3BTG2 121 aa19■□□□□ 0.63
PPP1R3F-201ENST00000055335 CKMP06732 381 aa19■□□□□ 0.63
PPP1R3F-201ENST00000055335 NR2F1P10589 423 aa19■□□□□ 0.63
PPP1R3F-201ENST00000055335 TALDO1P37837 337 aa19■□□□□ 0.63
PPP1R3F-201ENST00000055335 ADAM15Q13444 863 aa19■□□□□ 0.63
PPP1R3F-201ENST00000055335 RRM2BQ7LG56 351 aa19■□□□□ 0.63
PPP1R3F-201ENST00000055335 LUZP2Q86TE4 346 aa19■□□□□ 0.63
PPP1R3F-201ENST00000055335 ZNF655Q8N720 491 aaPredicted RBP19■□□□□ 0.63
PPP1R3F-201ENST00000055335 SAMD12Q8N8I0 201 aa19■□□□□ 0.63
PPP1R3F-201ENST00000055335 CHST14Q8NCH0 376 aa19■□□□□ 0.63
PPP1R3F-201ENST00000055335 GALNT11Q8NCW6 608 aa19■□□□□ 0.63
PPP1R3F-201ENST00000055335 RAET1EQ8TD07 263 aa19■□□□□ 0.63
PPP1R3F-201ENST00000055335 C11orf24Q96F05 449 aaPredicted RBP19■□□□□ 0.63
PPP1R3F-201ENST00000055335 FOPNLQ96NB1 174 aa19■□□□□ 0.63
PPP1R3F-201ENST00000055335 MARVELD1Q9BSK0 173 aa19■□□□□ 0.63
PPP1R3F-201ENST00000055335 RIOK2Q9BVS4 552 aaKnown RBP19■□□□□ 0.63
PPP1R3F-201ENST00000055335 QRSL1Q9H0R6 528 aaKnown RBP19■□□□□ 0.63
PPP1R3F-201ENST00000055335 SPATA2Q9UM82 520 aa19■□□□□ 0.63
PPP1R3F-201ENST00000055335 COL4A4P53420 1690 aaPredicted RBP19■□□□□ 0.63
PPP1R3F-201ENST00000055335 USP34Q70CQ2 3546 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms