RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Arpc5Q9CPW4 151 aa8.59□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Klhl28Q9CR40 571 aa8.59□□□□□ -1.03
Upf3b-201ENSMUST00000076265 4933402D24RikQ9D4D3 167 aa8.59□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Cdyl2Q9D5D8 503 aa8.59□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Tex19.2Q9D5S1 317 aa8.59□□□□□ -1.03
Upf3b-201ENSMUST00000076265 P2yr13Q9D8I2 337 aa8.59□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Znf654Q9DAU9 571 aa8.59□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Acot12Q9DBK0 556 aa8.59□□□□□ -1.03
Upf3b-201ENSMUST00000076265 ThegQ9JMB1 375 aa8.59□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Mx2Q9WVP9 655 aa8.59□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Bcl10Q9Z0H7 233 aa8.59□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Phf1Q9Z1B8 559 aa8.59□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Cldn7Q9Z261 211 aa8.59□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Kdm3aQ6PCM1 1323 aa8.59□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Lama2Q60675 3118 aaKnown RBP8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Olfr1129A2AV41 314 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Olfr1055A2AVX9 346 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Zfp229E9PWT2 705 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Vmn1r175K7N6T9 304 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Slc16a8O35308 492 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 MyadmO35682 320 aaKnown RBP8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Pgk1P09411 417 aaKnown RBP8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Itga5P11688 1053 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Msx1P13297 303 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Hk1P17710 974 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Muc13P19467 573 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 NsfP46460 744 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Tm6sf1P58749 370 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Vamp3P63024 103 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Pfdn6Q03958 127 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Hhipl1Q14DK5 791 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Osgin2Q3TEE9 550 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Hepacam2Q4VAH7 463 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Fam183bQ5NC57 135 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 AdipoqQ60994 247 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Adh7Q64437 374 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Tfap2eQ6VUP9 442 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Olfr275Q7TS18 319 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Itln1bQ80ZA0 313 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Tmem198Q8BG75 360 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Znf775Q8BI73 538 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Phka2Q8BWJ3 1235 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Spink10Q8CAC8 162 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 LipmQ8K2A6 422 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ttc4Q8R3H9 386 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Abhd17aQ99JW1 310 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 PsphQ99LS3 225 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ca15Q99N23 324 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Med10Q9CXU0 135 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Serpinb7Q9D695 380 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 SyncQ9EPM5 470 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Tbx18Q9EPZ6 613 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Rfx5Q9JL61 658 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Jag1Q9QXX0 1218 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Chd5A2A8L1 1946 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 A0A1Y7VJH8 109 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Akap5D3YVF0 745 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Trim15G3UY57 292 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Gm10250G3X9L6 160 aaKnown RBP8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Gm28051J3QMA2 81 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Vmn2r4K7N784 913 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Slc6a6O35316 621 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 GamtO35969 236 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Gstp1P19157 210 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ggta1P23336 394 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Tnfsf9P41274 309 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Krt6aP50446 553 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Atp6v1b2P62814 511 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ctps1P70698 591 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 FrzbP97401 323 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Gm4951Q3UED7 406 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Trim24Q64127 1051 aaKnown RBP8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Pram1Q6BCL1 675 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Uhrf2Q7TMI3 803 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Brat1Q8C3R1 822 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Rab36Q8CAM5 267 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Adnp2Q8CHC8 1165 aaKnown RBP8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Adam32Q8K410 754 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Stxbp6Q8R3T5 210 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ash2lQ91X20 623 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 HlcsQ920N2 722 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Tram2Q924Z5 370 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Zfp623Q9CY99 499 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Gm15013V9GWY0 266 aa8.58□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Sh3pxd2bA2AAY5 908 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Gm364A2AFI6 671 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Gm12695A2AGB2 545 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Vmn1r180B9EK86 305 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Gm15130F6PYN5 206 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 1700014D04RikJ3QMS2 983 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Vmn2r58K7N6V2 862 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Stmn3O70166 180 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 ZfrO88532 1074 aaKnown RBP8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 P01650 108 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 P01652 108 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 P06324 132 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Wnt6P22727 364 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ctdsp1P58466 261 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Btbd1P58544 488 aa8.57□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Arf6P62331 175 aa8.57□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 38.1 ms