RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Resp18P47939 175 aa15.21■□□□□ 0.03
Ckap4-201ENSMUST00000053871 Ankdd1bQ14DN9 521 aa15.21■□□□□ 0.03
Ckap4-201ENSMUST00000053871 Cxcl17Q5UW37 119 aa15.21■□□□□ 0.03
Ckap4-201ENSMUST00000053871 Elavl3Q60900 367 aaKnown RBP15.21■□□□□ 0.03
Ckap4-201ENSMUST00000053871 Rbbp4Q60972 425 aa15.21■□□□□ 0.03
Ckap4-201ENSMUST00000053871 Pon2Q62086 354 aa15.21■□□□□ 0.03
Ckap4-201ENSMUST00000053871 Prrg3Q6PAQ9 231 aa15.21■□□□□ 0.03
Ckap4-201ENSMUST00000053871 Mapre3Q6PER3 281 aa15.21■□□□□ 0.03
Ckap4-201ENSMUST00000053871 Slc43a1Q8BSM7 564 aa15.21■□□□□ 0.03
Ckap4-201ENSMUST00000053871 PpcdcQ8BZB2 204 aa15.21■□□□□ 0.03
Ckap4-201ENSMUST00000053871 Serpina11Q8CIE0 424 aa15.21■□□□□ 0.03
Ckap4-201ENSMUST00000053871 NclnQ8VCM8 563 aaKnown RBP15.21■□□□□ 0.03
Ckap4-201ENSMUST00000053871 Zdhhc5Q8VDZ4 715 aa15.21■□□□□ 0.03
Ckap4-201ENSMUST00000053871 Olfr599Q8VG01 315 aa15.21■□□□□ 0.03
Ckap4-201ENSMUST00000053871 Ssr2Q9CPW5 183 aa15.21■□□□□ 0.03
Ckap4-201ENSMUST00000053871 Glipr1Q9CWG1 255 aa15.21■□□□□ 0.03
Ckap4-201ENSMUST00000053871 Q9D4W2 315 aa15.21■□□□□ 0.03
Ckap4-201ENSMUST00000053871 Fbxo8Q9QZN3 319 aa15.21■□□□□ 0.03
Ckap4-201ENSMUST00000053871 Vps13aQ5H8C4 3166 aa15.21■□□□□ 0.03
Ckap4-201ENSMUST00000053871 Gm44973A0A140LJJ1 189 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Hpse2B2RY83 592 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Olfr605E9Q838 314 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Lgals7O54974 136 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Hoxd4P10628 250 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Cct3P80318 545 aaKnown RBP15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Fcho2Q3UQN2 809 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Rnf223Q3UV31 285 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Nr2f1Q60632 422 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Sqstm1Q64337 442 aaKnown RBP15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 VclQ64727 1066 aaKnown RBP15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Nt5dc1Q8C5P5 467 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 FkrpQ8CG64 494 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Sdr9c7Q8K3P0 313 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Vmn1r75Q8R289 305 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Ffar2Q8VCK6 330 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 TapbplQ8VD31 451 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 MrgprhQ99MT8 321 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Znf524Q9D0B1 321 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Trmt5Q9D0C4 501 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Tmed10Q9D1D4 219 aaKnown RBP15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 SrpraQ9DBG7 636 aaKnown RBP15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Aif1lQ9EQX4 150 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Cfap54Q8C6S9 3106 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Xlr5aA2BI45 236 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Vmn2r106E9PY92 862 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Gm609E9Q573 300 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Rhox13F6YCR7 232 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 NsmafO35242 920 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Fkbp14P59024 211 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 NrtnP97463 195 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Mat2aQ3THS6 395 aaKnown RBP15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Tmem64Q3U145 381 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Rars2Q3U186 578 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Q6P1I3 445 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Mup21Q80YX8 181 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Cst13Q80ZN5 141 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Q810M1 233 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Pphln1Q8K2H1 381 aaKnown RBP15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Atat1Q8K341 421 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Camk2gQ923T9 529 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Med27Q9DB40 311 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Plxna2P70207 1894 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Cd300ld4A2A7W1 245 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Gm2956E9PVJ0 216 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Gm10639E9Q6L7 222 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Serpinb9eO08806 377 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 PnpP23492 289 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Rpl3P27659 403 aaKnown RBP15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Ube2e3P52483 207 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 UrodP70697 367 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Bmp1P98063 991 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Taar2Q5QD17 339 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Prkg2Q61410 762 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 EngQ63961 653 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Cd300ld3Q6SJQ5 245 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Olfr1045Q7TR80 315 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Slc38a9Q8BGD6 560 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Enpp6Q8BGN3 440 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Zcchc3Q8BPK2 400 aaKnown RBP15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Q8CF31 99 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Samd14Q8K070 417 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Dcun1d3Q8K0V2 304 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Mcfd2Q8K5B2 145 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Chrna3Q8R4G9 499 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Kcnj10Q9JM63 379 aa15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Dnajb1Q9QYJ3 340 aaKnown RBP15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 HnrnpfQ9Z2X1 415 aaKnown RBP15.2■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Slc9a5B2RXE2 898 aa15.19■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Kctd17E0CYQ0 296 aa15.19■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Cyp2j5O54749 501 aa15.19■□□□□ 0.02
Ckap4-201ENSMUST00000053871 FhitO89106 150 aa15.19■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Csf2P01587 141 aa15.19■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Opn1swP51491 346 aa15.19■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Pcbp3P57722 371 aaKnown RBP15.19■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Olfr629Q0VBH3 314 aa15.19■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Samd12Q0VE29 161 aa15.19■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Cdkn2dQ60773 166 aa15.19■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Crispld1Q8CGD2 500 aa15.19■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Pex12Q8VC48 359 aa15.19■□□□□ 0.02
Ckap4-201ENSMUST00000053871 Acot7Q91V12 381 aa15.19■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 22.1 ms