RNA–Protein interactions for RNA: ENSMUST00000042617.13

Clcnka-201, Transcript of Chloride channel protein ClC-Ka, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clcnka, Length 2,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcnka-201ENSMUST00000042617 Tspan1Q99J59 240 aa13.78□□□□□ -0.2
Clcnka-201ENSMUST00000042617 BambiQ9D0L6 260 aa13.78□□□□□ -0.2
Clcnka-201ENSMUST00000042617 Rsph9Q9D9V4 276 aa13.78□□□□□ -0.2
Clcnka-201ENSMUST00000042617 P2ry14Q9ESG6 338 aa13.78□□□□□ -0.2
Clcnka-201ENSMUST00000042617 Elf4Q9Z2U4 655 aa13.78□□□□□ -0.2
Clcnka-201ENSMUST00000042617 Gm7929A0A286YDV3 213 aa13.77□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Sppl2cA2A6C4 690 aa13.77□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Aldh3b2E9Q3E1 479 aa13.77□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Slc27a6E9Q9W4 619 aa13.77□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Gm21977F6U3N7 213 aa13.77□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Gm8247F6VRJ8 213 aa13.77□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Gm8005F6YKY3 213 aa13.77□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Gm3015F6ZAP6 213 aa13.77□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Gm8212F6ZMY5 213 aa13.77□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Gm7954F7BAX1 213 aa13.77□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Gm8138F7BY56 213 aa13.77□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Gm8232F7CFJ3 213 aa13.77□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Gm17079F7D8Y4 213 aa13.77□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Gm8165L7N218 213 aa13.77□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Gm8122L7N2C7 213 aa13.77□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Gm17078M0QW51 211 aa13.77□□□□□ -0.21
Clcnka-201ENSMUST00000042617 IlkO55222 452 aa13.77□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Grem1O70326 184 aa13.77□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Rc3h2P0C090 1187 aaKnown RBP13.77□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Hoxb9P20615 250 aa13.77□□□□□ -0.21
Clcnka-201ENSMUST00000042617 MeikinQ5F2C3 434 aa13.77□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Nfe2l2Q60795 597 aa13.77□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Slitrk4Q810B8 837 aa13.77□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Camkk1Q8VBY2 505 aa13.77□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Cdca5Q9CPY3 264 aa13.77□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Cthrc1Q9D1D6 245 aa13.77□□□□□ -0.21
Clcnka-201ENSMUST00000042617 ArskQ9D2L1 553 aa13.77□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Vmn1r49Q9WUF1 310 aa13.77□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Mrgpra2aA0A0R4J1Z0 331 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Nlrp1bA1Z198 1177 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Gm7951E9Q0A2 213 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Olfr173E9QAT7 321 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Gm6482F6YHC1 213 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Gm17124F6ZIG1 213 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Gm3327F7C9A1 213 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Hax1O35387 280 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Prl7a1O54830 266 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Opn1swP51491 346 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Serpina7P61939 418 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Rps24P62849 133 aaKnown RBP13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 A1bgQ19LI2 512 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Mrpl10Q3TBW2 262 aaKnown RBP13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Slc37a3Q3TIT8 494 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Ddx5Q61656 614 aaKnown RBP13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 RhocQ62159 193 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 OmpQ64288 163 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 TCAIMQ66JZ4 499 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Ube2r2Q6ZWZ2 238 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Npas4Q8BGD7 802 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Rfc3Q8R323 356 aaKnown RBP13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Uck2Q99PM9 261 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Trappc2Q9CQP2 140 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Pin4Q9CWW6 131 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 5530401A14RikQ9D3H9 131 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Ppil3Q9D6L8 161 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Vmn1r29Q9EQ41 303 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Glipr1l3A0A1W2P7V2 236 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Gm8973D3YX71 104 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Tsga10ipF7A1F0 157 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Vmn2r117K7N6V1 857 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 H2-Q1O19441 368 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Scrg1O88745 98 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Itm2bO89051 266 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 FhitO89106 150 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Rpl7P14148 270 aaKnown RBP13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Lsp1P19973 330 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Nr2f6P43136 390 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Lad1P57016 528 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Btg1P62325 171 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 ErgP81270 486 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 HgfQ08048 728 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Dnajc11Q5U458 559 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Meig1Q61845 88 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Taf6Q62311 678 aaKnown RBP13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Cdkl1Q8CEQ0 352 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Noxa1Q8CJ00 444 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Vmn1r185Q8R299 319 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Oard1Q8R5F3 152 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Olfr398Q8VFY0 314 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Asb16Q8VHS5 453 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Slc35b3Q922Q5 369 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Klhl22Q99JN2 634 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 TrabdQ99JY4 376 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Rpl17Q9CPR4 184 aaKnown RBP13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Slc25a30Q9CR58 291 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Alg14Q9D081 217 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Fam3bQ9D309 235 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Sec23bQ9D662 767 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Izumo2Q9DA16 220 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 NfkbizQ9EST8 728 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Sgk2Q9QZS5 367 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 ProdhQ9WU79 599 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Kcnd3Q9Z0V1 655 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Padi3Q9Z184 664 aa13.76□□□□□ -0.21
Clcnka-201ENSMUST00000042617 Uba2Q9Z1F9 638 aa13.76□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms