RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Gpr22Q8BZL4 432 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Grsf1Q8C5Q4 479 aaKnown RBP9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Cables2Q8K3M5 476 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Taar1Q923Y8 332 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Slc9a3r2Q9JHL1 337 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Sema4fQ9Z123 777 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Olfr1032A2ATE5 310 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Gm9008E9PVG0 424 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Rdh5O55240 318 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Cpt2P52825 658 aaKnown RBP9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Mier2Q3U3N0 541 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Eml4Q3UMY5 988 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 PtprjQ64455 1238 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 BC080695Q66JY9 481 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 BpiQ67E05 483 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Gpr171Q8BG55 319 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 LctlQ8K1F9 566 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Rbm12Q8R4X3 992 aaKnown RBP9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Rbms2Q8VC70 383 aaKnown RBP9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Olfr617Q8VGA1 318 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Ddx1Q91VR5 740 aaKnown RBP9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Zfp534A2A7A1 661 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Gjd2O54851 321 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Pdlim1O70400 327 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Pfdn2O70591 154 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Il12aP43431 215 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 GlaP51569 419 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Lin54Q571G4 749 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Thoc6Q5U4D9 341 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Znf354aQ61751 572 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Cd300lfQ6SJQ7 337 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Carns1Q6ZPS2 827 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Nadsyn1Q711T7 725 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Pou6f2Q8BJI4 691 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Fbxo48Q8CAT8 161 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Nudt6Q8CH40 313 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Sirt3Q8R104 334 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Etv3Q8R4Z4 513 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Q9CPZ3 230 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Xrn2Q9DBR1 951 aaKnown RBP9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 NplQ9DCJ9 320 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Mbtps1Q9WTZ2 1052 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Tcf7l1Q9Z1J1 584 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Ift172Q6VH22 1749 aa9.43□□□□□ -0.9
Syne1-201ENSMUST00000041639 Arl9F7BE40 171 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Cyp4a31F8WGU9 509 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 P01650 108 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 P01653 108 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 CtswP56203 371 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Nup43P59235 380 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Tbpl1P62340 186 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Nfatc3P97305 1075 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Fezf1Q0VDQ9 475 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Olfr1046Q7TR79 316 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Rhbdd3Q8BP97 385 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Ptges2Q8BWM0 384 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Plekhn1Q8C886 359 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Hmgcll1Q8JZS7 343 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Vmn1r18Q8R2C8 299 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Spred2Q924S7 410 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Rcan2Q9JHG2 197 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 RhagQ9QUT0 438 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Sgk2Q9QZS5 367 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Kndc1Q0KK55 1742 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 IsxA1A546 240 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Pramef25A2ASI9 494 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Tomm5B1AXP6 51 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Gm8973D3YX71 104 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Syn1O88935 706 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 OtcP11725 354 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Wnt7bP28047 349 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 PtprrQ62132 656 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Npsr1Q8BZP8 371 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 NdnfQ8C119 568 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Sav1Q8VEB2 386 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Olfr666Q8VH00 318 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 FcrlaQ920A9 352 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 B4galt6Q9WVK5 382 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Pik3c2aQ61194 1686 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Gp1baO35930 734 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Dnajb5O89114 348 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Fbxo31Q3TQF0 507 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Tmem231Q3U284 315 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 GnsQ8BFR4 544 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Cnksr3Q8BMA3 555 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 1700020N01RikQ8CF20 87 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Uqcrc1Q9CZ13 480 aaKnown RBP9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Isca2Q9DCB8 154 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Rad18Q9QXK2 509 aaKnown RBP9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Gm5538W4VSP6 401 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Lrr1D3YY91 422 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Vmn2r115E9Q0E7 857 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Zfp384E9Q1A5 584 aaKnown RBP9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Zfp989H3BLB0 661 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Hes5P70120 167 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 CbarpQ66L44 698 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Pum2Q80U58 1066 aaKnown RBP9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Zfp189Q8BKP2 608 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 AntxrlQ8BVM2 641 aa9.42□□□□□ -0.9
Syne1-201ENSMUST00000041639 Gfod2Q9CYH5 385 aa9.42□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms