RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Echdc2Q3TLP5 296 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Dtx3lQ3UIR3 748 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 AktipQ64362 292 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Slc6a5Q761V0 799 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 H2-M10.2Q85ZW9 329 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 4931406P16RikQ8C5X1 1059 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Spp2Q8K1I3 203 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Vmn1r83Q8R287 306 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Slc22a30Q96LX3 552 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 NmbQ9CR53 121 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Olfr1315-ps1A0A140LI66 314 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Nlrp1bA1Z198 1177 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Slc9a5B2RXE2 898 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Gm8922F6XVS9 199 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 MlxO08609 298 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Wsb2O54929 404 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Hnf1bP27889 558 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Rnf19aP50636 840 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 S100a1P56565 94 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Q6PAC4 1279 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 NarsQ8BP47 559 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Abi1Q8CBW3 481 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Vmn1r185Q8R299 319 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Etv3Q8R4Z4 513 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Kctd5Q8VC57 234 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Paip1Q8VE62 400 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Olfr1316Q8VG12 314 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Satb2Q8VI24 733 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Ppp1r16aQ923M0 524 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Sfxn2Q925N2 322 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Klhl22Q99JN2 634 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Mospd2Q9CWP6 518 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Mab21l1O70299 359 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Rln1P47932 185 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Thbs2Q03350 1172 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Fam187bQ0VAY3 358 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Nptx1Q62443 432 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Metap1Q8BP48 386 aaKnown RBP16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Fam78aQ8C552 283 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Q8R3C1 574 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 CtsqQ91ZF4 343 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Tmem43Q9DBS1 400 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Isg20Q9JL16 300 aa16.03■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Sppl2cA2A6C4 690 aa16.02■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Olfr1040A2ARY1 313 aa16.02■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Gm8973D3YX71 104 aa16.02■□□□□ 0.16
Ctcf-201ENSMUST00000005841 F10O88947 481 aa16.02■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Atp1b1P14094 304 aaKnown RBP16.02■□□□□ 0.16
Ctcf-201ENSMUST00000005841 CratP47934 626 aa16.02■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Cd53Q61451 219 aa16.02■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Zrsr1Q64707 428 aa16.02■□□□□ 0.16
Ctcf-201ENSMUST00000005841 GalpQ810H5 117 aa16.02■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Q8BHB7 409 aa16.02■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Znf622Q91VY9 476 aa16.02■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Raet1eQ9CZQ6 251 aa16.02■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Atad1Q9D5T0 361 aa16.02■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Acox3Q9EPL9 700 aa16.02■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Cst9Q9Z0H6 137 aa16.02■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Cd163l1A0A1B0GSB0 991 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Gm8765B7ZWJ3 1017 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Grem1O70326 184 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Htr3aP23979 487 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 CenpcP49452 906 aaKnown RBP16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 AmbpQ07456 349 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 UbqlnlQ14DL0 610 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Gm906Q3V0M1 1017 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 CebpeQ6PZD9 281 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Aoc1Q8JZQ5 751 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 LgalslQ8VED9 172 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Olfr821Q8VG45 310 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Ms4a10Q99N03 267 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Fbxo32Q9CPU7 355 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Olfr937Q9EQB4 311 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Dclk1Q9JLM8 756 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Slc9a6A1L3P4 702 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Ccdc85cE9Q6B2 420 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 2610008E11RikG3X964 669 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Gm3476K7N6V0 257 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Aldh1a7O35945 501 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Tk1P04184 233 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Mmp12P34960 473 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Tmem151bQ68FE7 561 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Amer3Q6NS69 780 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Ticam1Q80UF7 732 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Q80Y39 304 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Zc3hc1Q80YV2 501 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Fmr1nbQ80ZA7 238 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Nup107Q8BH74 926 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Casc3Q8K3W3 698 aaKnown RBP16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Zfp709Q8VC29 727 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Bloc1s6Q9R0C0 172 aa16.02■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Gm14781A2A9Q9 366 aa16.01■□□□□ 0.15
Ctcf-201ENSMUST00000005841 H60cB1B213 197 aa16.01■□□□□ 0.15
Ctcf-201ENSMUST00000005841 CkmP07310 381 aa16.01■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Hoxd10P28359 340 aa16.01■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Ceacam1P31809 521 aa16.01■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Zic1P46684 447 aa16.01■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Fut7Q11131 389 aa16.01■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Mageb5Q14AN0 366 aa16.01■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Nt5eQ61503 576 aa16.01■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms