RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 TMEM171Q8WVE6 324 aa4.57□□□□□ -1.68
SDCBP-213ENST00000630925 RMND5BQ96G75 393 aaPredicted RBP4.57□□□□□ -1.68
SDCBP-213ENST00000630925 SENP5Q96HI0 755 aaPredicted RBP4.57□□□□□ -1.68
SDCBP-213ENST00000630925 PACRGQ96M98 296 aaPredicted RBP4.57□□□□□ -1.68
SDCBP-213ENST00000630925 ACCSQ96QU6 501 aa4.57□□□□□ -1.68
SDCBP-213ENST00000630925 CRAMP1Q96RY5 1269 aa4.57□□□□□ -1.68
SDCBP-213ENST00000630925 ACOX2Q99424 681 aa4.57□□□□□ -1.68
SDCBP-213ENST00000630925 C20orf24Q9BUV8 137 aa4.57□□□□□ -1.68
SDCBP-213ENST00000630925 DUSP15Q9H1R2 295 aaPredicted RBP4.57□□□□□ -1.68
SDCBP-213ENST00000630925 SNX25Q9H3E2 840 aa4.57□□□□□ -1.68
SDCBP-213ENST00000630925 LPAR2Q9HBW0 351 aa4.57□□□□□ -1.68
SDCBP-213ENST00000630925 ZDHHC4Q9NPG8 344 aa4.57□□□□□ -1.68
SDCBP-213ENST00000630925 TAS2R14Q9NYV8 317 aa4.57□□□□□ -1.68
SDCBP-213ENST00000630925 MRM2Q9UI43 246 aaKnown RBP4.57□□□□□ -1.68
SDCBP-213ENST00000630925 NOCTQ9UK39 431 aaKnown RBP4.57□□□□□ -1.68
SDCBP-213ENST00000630925 ADAM21Q9UKJ8 722 aa4.57□□□□□ -1.68
SDCBP-213ENST00000630925 LRP12Q9Y561 859 aa4.57□□□□□ -1.68
SDCBP-213ENST00000630925 QRICH2Q9H0J4 1663 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 CCDC171Q6TFL3 1326 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 A0A1W2PPQ1 181 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 A0A1W2PS29 197 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 ESYT2A0FGR8 921 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 C1orf226A1L170 272 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 CBY3A6NI87 242 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 ARHGEF33A8MVX0 844 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 FADS2P1A8MWK0 482 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 HHLA1C9JL84 531 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 SGK494L7N484 410 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 TRAFD1O14545 582 aaPredicted RBP4.56□□□□□ -1.68
SDCBP-213ENST00000630925 ZNF213O14771 459 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 NME2P1O60361 137 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 HAUS5O94927 633 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 TSPAN12O95859 305 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 CBX7O95931 251 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 CST4P01036 141 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 RAP2AP10114 183 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 NCK1P16333 377 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 GCSHP23434 173 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 HNRNPH3P31942 346 aaKnown RBP4.56□□□□□ -1.68
SDCBP-213ENST00000630925 OR3A1P47881 315 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 MMP15P51511 669 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 ZNF75DP51815 510 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 ADARB1P78563 741 aaKnown RBP4.56□□□□□ -1.68
SDCBP-213ENST00000630925 SLC17A1Q14916 467 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 EFNB3Q15768 340 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 PPP1R3AQ16821 1122 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 SOWAHAQ2M3V2 549 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 ZCWPW2Q504Y3 356 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 CMPK2Q5EBM0 449 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 C6orf226Q5I0X4 101 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 SEL1L2Q5TEA6 688 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 GPR107Q5VW38 600 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 HIST2H2BCQ6DN03 193 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 HIST2H2BDQ6DRA6 164 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 GRHL2Q6ISB3 625 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 SIGLEC15Q6ZMC9 328 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 PRSS45Q7RTY3 260 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 IGFN1Q86VF2 1251 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 SLC22A16Q86VW1 577 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 ZC3HC1Q86WB0 502 aaKnown RBP4.56□□□□□ -1.68
SDCBP-213ENST00000630925 HIPK1Q86Z02 1210 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 LCORLQ8N3X6 602 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 TMEM104Q8NE00 496 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 CPEB3Q8NE35 698 aaKnown RBP4.56□□□□□ -1.68
SDCBP-213ENST00000630925 OR6Q1Q8NGQ2 317 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 U2AF1L4Q8WU68 220 aaKnown RBP4.56□□□□□ -1.68
SDCBP-213ENST00000630925 NUDCD2Q8WVJ2 157 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 NKD2Q969F2 451 aaPredicted RBP4.56□□□□□ -1.68
SDCBP-213ENST00000630925 MOAP1Q96BY2 351 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 ECHDC3Q96DC8 303 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 B3GALT6Q96L58 329 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 C3orf30Q96M34 536 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 KLHL32Q96NJ5 620 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 CENPKQ9BS16 269 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 RBM24Q9BX46 236 aaKnown RBP4.56□□□□□ -1.68
SDCBP-213ENST00000630925 CEP41Q9BYV8 373 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 SLC22A4Q9H015 551 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 RRAGCQ9HB90 399 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 OR2S2Q9NQN1 319 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 BATF3Q9NR55 127 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 TMEM248Q9NWD8 314 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 NLGN3Q9NZ94 848 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 PIPOXQ9P0Z9 390 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 GMPR2Q9P2T1 348 aaKnown RBP4.56□□□□□ -1.68
SDCBP-213ENST00000630925 TNNQ9UQP3 1299 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 KPTNQ9Y664 436 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 MRPS18BQ9Y676 258 aaKnown RBP4.56□□□□□ -1.68
SDCBP-213ENST00000630925 URGCP-MRPS24S4R325 110 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 V9GYQ6 96 aa4.56□□□□□ -1.68
SDCBP-213ENST00000630925 YY2O15391 372 aa4.55□□□□□ -1.68
SDCBP-213ENST00000630925 EMC8O43402 210 aa4.55□□□□□ -1.68
SDCBP-213ENST00000630925 SNAI2O43623 268 aa4.55□□□□□ -1.68
SDCBP-213ENST00000630925 OR1F1O43749 312 aa4.55□□□□□ -1.68
SDCBP-213ENST00000630925 UPP2O95045 317 aa4.55□□□□□ -1.68
SDCBP-213ENST00000630925 DHFRP00374 187 aa4.55□□□□□ -1.68
SDCBP-213ENST00000630925 HIST1H2ABP04908 130 aa4.55□□□□□ -1.68
SDCBP-213ENST00000630925 NUDT17P0C025 328 aa4.55□□□□□ -1.68
SDCBP-213ENST00000630925 ATXN1LP0C7T5 689 aaKnown RBP4.55□□□□□ -1.68
SDCBP-213ENST00000630925 CTSAP10619 480 aa4.55□□□□□ -1.68
SDCBP-213ENST00000630925 HIST1H2ADP20671 130 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms