RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 SPATA5L1Q9BVQ7 753 aa20.79■□□□□ 0.92
PNKP-220ENST00000627232 POLR1BQ9H9Y6 1135 aa20.79■□□□□ 0.92
PNKP-220ENST00000627232 LYRM4Q9HD34 91 aa20.79■□□□□ 0.92
PNKP-220ENST00000627232 KCND3Q9UK17 655 aa20.79■□□□□ 0.92
PNKP-220ENST00000627232 POFUT2Q9Y2G5 429 aa20.79■□□□□ 0.92
PNKP-220ENST00000627232 CCDC88CQ9P219 2028 aa20.79■□□□□ 0.92
PNKP-220ENST00000627232 LOC105369274A0A096LPK9 316 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 LOC102723532A0A0G2JNH3 316 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 PRAMEF27A3QJZ7 478 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 SLC1A7O00341 560 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 GADD45GO95257 159 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 C8orf89P0DMQ9 161 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 ETS2P15036 469 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 ALOX12P18054 663 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 TLX1P31314 330 aaPredicted RBP20.78■□□□□ 0.92
PNKP-220ENST00000627232 STARD6P59095 220 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 UBXN2BQ14CS0 331 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 SYPL1Q16563 259 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 FRMPD2BQ6IN97 320 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 ARMC6Q6NXE6 501 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 OR4N4Q8N0Y3 316 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 LGI4Q8N135 537 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 GJD3Q8N144 294 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 FAM46DQ8NEK8 389 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 ZFAND2BQ8WV99 257 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 ELP4Q96EB1 424 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 SHDQ96IW2 340 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 CNDP2Q96KP4 475 aaKnown RBP20.78■□□□□ 0.92
PNKP-220ENST00000627232 NELL2Q99435 816 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 FEVQ99581 238 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 BTBD2Q9BX70 525 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 PAPOLBQ9NRJ5 636 aaKnown RBP20.78■□□□□ 0.92
PNKP-220ENST00000627232 NTMQ9P121 344 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 SEC14L3Q9UDX4 400 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 DAPP1Q9UN19 280 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 B4GAT1O43505 415 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 ASNA1O43681 348 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 HMGN2P05204 90 aaKnown RBP20.78■□□□□ 0.92
PNKP-220ENST00000627232 CYP4B1P13584 511 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 PEX19P40855 299 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 LIM2P55344 173 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 C1orf61Q13536 156 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 RUNX2Q13950 521 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 CYP27C1Q4G0S4 372 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 DEFB134Q4QY38 66 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 TMEM107Q6UX40 140 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 IQCHQ86VS3 1027 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 SFTPA2Q8IWL1 248 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 SLC5A8Q8N695 610 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 CADM4Q8NFZ8 388 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 OR4K14Q8NGD5 310 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 OR5D16Q8NGK9 328 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 MAGED4Q96JG8 741 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 HRASLS5Q96KN8 279 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 COL21A1Q96P44 957 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 WNT16Q9UBV4 365 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 ENOPH1Q9UHY7 261 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 SLC22A7Q9Y694 548 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 SLCO1B1Q9Y6L6 691 aa20.78■□□□□ 0.92
PNKP-220ENST00000627232 SCN3AQ9NY46 2000 aa20.77■□□□□ 0.92
PNKP-220ENST00000627232 A0A0G2JPF8 293 aa20.77■□□□□ 0.92
PNKP-220ENST00000627232 A0A1W2PR77 199 aa20.77■□□□□ 0.92
PNKP-220ENST00000627232 HNRNPCL2B2RXH8 293 aa20.77■□□□□ 0.92
PNKP-220ENST00000627232 HNRNPCL3B7ZW38 293 aa20.77■□□□□ 0.92
PNKP-220ENST00000627232 J3KTA2 159 aa20.77■□□□□ 0.92
PNKP-220ENST00000627232 HNRNPCL4P0DMR1 293 aa20.77■□□□□ 0.92
PNKP-220ENST00000627232 PVRP15151 417 aa20.77■□□□□ 0.92
PNKP-220ENST00000627232 AGXTP21549 392 aa20.77■□□□□ 0.92
PNKP-220ENST00000627232 CD38P28907 300 aa20.77■□□□□ 0.92
PNKP-220ENST00000627232 PRKAG1P54619 331 aa20.77■□□□□ 0.92
PNKP-220ENST00000627232 PMS2P3Q13401 168 aa20.77■□□□□ 0.92
PNKP-220ENST00000627232 LSAMPQ13449 338 aa20.77■□□□□ 0.92
PNKP-220ENST00000627232 LASP1Q14847 261 aaKnown RBP20.77■□□□□ 0.92
PNKP-220ENST00000627232 ELOCQ15369 112 aa20.77■□□□□ 0.92
PNKP-220ENST00000627232 PTCRAQ6ISU1 281 aaPredicted RBP20.77■□□□□ 0.92
PNKP-220ENST00000627232 DGLUCYQ7Z3D6 616 aa20.77■□□□□ 0.92
PNKP-220ENST00000627232 LRRC25Q8N386 305 aaPredicted RBP20.77■□□□□ 0.92
PNKP-220ENST00000627232 NUP43Q8NFH3 380 aa20.77■□□□□ 0.92
PNKP-220ENST00000627232 OR9A2Q8NGT5 310 aa20.77■□□□□ 0.92
PNKP-220ENST00000627232 KLHL25Q9H0H3 589 aa20.77■□□□□ 0.92
PNKP-220ENST00000627232 POMT2Q9UKY4 750 aa20.77■□□□□ 0.92
PNKP-220ENST00000627232 NAALAD2Q9Y3Q0 740 aa20.77■□□□□ 0.92
PNKP-220ENST00000627232 HCN4Q9Y3Q4 1203 aa20.77■□□□□ 0.92
PNKP-220ENST00000627232 KRBA1A5PL33 1030 aa20.76■□□□□ 0.91
PNKP-220ENST00000627232 FAM170BA6NMN3 283 aa20.76■□□□□ 0.91
PNKP-220ENST00000627232 CCNB2O95067 398 aa20.76■□□□□ 0.91
PNKP-220ENST00000627232 ANGPTL1O95841 491 aa20.76■□□□□ 0.91
PNKP-220ENST00000627232 CSF2P04141 144 aa20.76■□□□□ 0.91
PNKP-220ENST00000627232 WNT1P04628 370 aa20.76■□□□□ 0.91
PNKP-220ENST00000627232 ALPPL2P10696 532 aa20.76■□□□□ 0.91
PNKP-220ENST00000627232 NME1P15531 152 aaKnown RBP20.76■□□□□ 0.91
PNKP-220ENST00000627232 MC3RP41968 323 aa20.76■□□□□ 0.91
PNKP-220ENST00000627232 RPP38P78345 283 aaKnown RBP20.76■□□□□ 0.91
PNKP-220ENST00000627232 MAD2L1BPQ15013 274 aaPredicted RBP20.76■□□□□ 0.91
PNKP-220ENST00000627232 COLEC12Q5KU26 742 aa20.76■□□□□ 0.91
PNKP-220ENST00000627232 USP53Q70EK8 1073 aa20.76■□□□□ 0.91
PNKP-220ENST00000627232 OR52J3Q8NH60 311 aa20.76■□□□□ 0.91
PNKP-220ENST00000627232 PHF10Q8WUB8 498 aaKnown RBP20.76■□□□□ 0.91
PNKP-220ENST00000627232 DHRS1Q96LJ7 313 aa20.76■□□□□ 0.91
PNKP-220ENST00000627232 SEMA6CQ9H3T2 930 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms