RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 ERVK-8P63133 956 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 RPL38P63173 70 aaKnown RBP13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 FOXK1P85037 733 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 C2orf80Q0P641 193 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 FUT7Q11130 342 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 MAP4K2Q12851 820 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 ZNF267Q14586 743 aaPredicted RBP13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 KIAA0040Q15053 153 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 CEBPEQ15744 281 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 UGT3A2Q3SY77 523 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 XKR7Q5GH72 579 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 ZNF766Q5HY98 468 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 FCRLBQ6BAA4 426 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 Q6ZSR9 355 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 R3HCC1LQ7Z5L2 792 aaKnown RBP13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 TAGAPQ8N103 731 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 POGLUT1Q8NBL1 392 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 MDS2Q8NDY4 140 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 TP53INP1Q96A56 240 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 MIB2Q96AX9 1013 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 C19orf60Q96EN9 201 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 EBPLQ9BY08 206 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 TNFRSF12AQ9NP84 129 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 TIMMDC1Q9NPL8 285 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 SLC35C2Q9NQQ7 365 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 THAP1Q9NVV9 213 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 PLA2G3Q9NZ20 509 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 MAP10Q9P2G4 905 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 PRODH2Q9UF12 536 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 ZNF223Q9UK11 482 aaPredicted RBP13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 ERVK-19Q9WJR5 959 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 A8MVJ9 347 aa13□□□□□ -0.33
SNRPA1-216ENST00000626000 KLF11O14901 512 aa13□□□□□ -0.33
SNRPA1-216ENST00000626000 TBX19O60806 448 aa13□□□□□ -0.33
SNRPA1-216ENST00000626000 SLC25A12O75746 678 aa13□□□□□ -0.33
SNRPA1-216ENST00000626000 PRPS2P11908 318 aa13□□□□□ -0.33
SNRPA1-216ENST00000626000 HPCAL1P37235 193 aa13□□□□□ -0.33
SNRPA1-216ENST00000626000 NRG3P56975 720 aa13□□□□□ -0.33
SNRPA1-216ENST00000626000 SLC37A1P57057 533 aa13□□□□□ -0.33
SNRPA1-216ENST00000626000 DCAF7P61962 342 aa13□□□□□ -0.33
SNRPA1-216ENST00000626000 FAM71E1Q6IPT2 247 aa13□□□□□ -0.33
SNRPA1-216ENST00000626000 CYP4Z2PQ8N1L4 340 aa13□□□□□ -0.33
SNRPA1-216ENST00000626000 GOLM1Q8NBJ4 401 aa13□□□□□ -0.33
SNRPA1-216ENST00000626000 ZFP28Q8NHY6 868 aa13□□□□□ -0.33
SNRPA1-216ENST00000626000 PUM2Q8TB72 1066 aaKnown RBP eCLIP13□□□□□ -0.33
SNRPA1-216ENST00000626000 AGR3Q8TD06 166 aa13□□□□□ -0.33
SNRPA1-216ENST00000626000 PPWD1Q96BP3 646 aaKnown RBP13□□□□□ -0.33
SNRPA1-216ENST00000626000 SCMH1Q96GD3 660 aa13□□□□□ -0.33
SNRPA1-216ENST00000626000 BBS4Q96RK4 519 aa13□□□□□ -0.33
SNRPA1-216ENST00000626000 TUBB1Q9H4B7 451 aa13□□□□□ -0.33
SNRPA1-216ENST00000626000 HPF1Q9NWY4 346 aa13□□□□□ -0.33
SNRPA1-216ENST00000626000 ZDHHC2Q9UIJ5 367 aa13□□□□□ -0.33
SNRPA1-216ENST00000626000 ERVK-11Q9UQG0 969 aa13□□□□□ -0.33
SNRPA1-216ENST00000626000 EIF3LQ9Y262 564 aaKnown RBP13□□□□□ -0.33
SNRPA1-216ENST00000626000 POLR3HQ9Y535 204 aaPredicted RBP13□□□□□ -0.33
SNRPA1-216ENST00000626000 C2orf92A0A1B0GVN3 265 aa12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 TRPC5OSA6NMA1 111 aa12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 KLRC4-KLRK1H3BQV0 150 aa12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 OR2J2O76002 312 aa12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 WISP1O95388 367 aa12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 SP1P08047 785 aa12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 BGNP21810 368 aa12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 MLLT10P55197 1068 aa12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 RPP38P78345 283 aaKnown RBP12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 MPP2Q14168 576 aa12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 ELOAQ14241 798 aaKnown RBP12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 PRICKLE4Q2TBC4 344 aa12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 GALNTL6Q49A17 601 aa12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 SLC25A25Q6KCM7 469 aa12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 RTL4Q6ZR62 310 aa12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 CATSPER1Q8NEC5 780 aa12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 CDC26Q8NHZ8 85 aa12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 THAP3Q8WTV1 239 aaPredicted RBP12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 CTHRC1Q96CG8 243 aa12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 TUBGCP3Q96CW5 907 aa12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 SNRNP40Q96DI7 357 aaKnown RBP12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 CNRIP1Q96F85 164 aaPredicted RBP12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 ZNF681Q96N22 645 aa12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 RASL10BQ96S79 203 aa12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 PRPF18Q99633 342 aaKnown RBP12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 BARD1Q99728 777 aaKnown RBP12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 NPAS2Q99743 824 aa12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 SH3GL2Q99962 352 aa12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 BRINP2Q9C0B6 783 aa12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 WWTR1Q9GZV5 400 aa12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 OR10A5Q9H207 317 aa12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 REEP4Q9H6H4 257 aa12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 ATAD3AQ9NVI7 634 aa12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 NOP53Q9NZM5 478 aaKnown RBP12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 HEY2Q9UBP5 337 aa12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 CSAG2Q9Y5P2 127 aa12.99□□□□□ -0.33
SNRPA1-216ENST00000626000 BSNQ9UPA5 3926 aa12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 A0A087WV62 115 aa12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 TMEM233B4DJY2 109 aa12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 ACOX3O15254 700 aa12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 NME2P1O60361 137 aa12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 COQ9O75208 318 aa12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 NEURL1O76050 574 aa12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 EDN3P14138 238 aa12.98□□□□□ -0.33
SNRPA1-216ENST00000626000 SDC1P18827 310 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms