RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 EVA1AQ9H8M9 152 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 ANKHQ9HCJ1 492 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 MRPS33Q9Y291 106 aaKnown RBP15.41■□□□□ 0.06
LDB3-208ENST00000623007 SOX1O00570 391 aaPredicted RBP15.4■□□□□ 0.06
LDB3-208ENST00000623007 GALR3O60755 368 aaPredicted RBP15.4■□□□□ 0.06
LDB3-208ENST00000623007 HMGN2P05204 90 aaKnown RBP15.4■□□□□ 0.06
LDB3-208ENST00000623007 PROS1P07225 676 aa15.4■□□□□ 0.06
LDB3-208ENST00000623007 FESP07332 822 aa15.4■□□□□ 0.06
LDB3-208ENST00000623007 IFNA8P32881 189 aa15.4■□□□□ 0.06
LDB3-208ENST00000623007 PXNP49023 591 aaPredicted RBP15.4■□□□□ 0.06
LDB3-208ENST00000623007 XKP51811 444 aa15.4■□□□□ 0.06
LDB3-208ENST00000623007 AFF3P51826 1226 aaKnown RBP15.4■□□□□ 0.06
LDB3-208ENST00000623007 EMP3P54852 163 aa15.4■□□□□ 0.06
LDB3-208ENST00000623007 SPIBQ01892 262 aa15.4■□□□□ 0.06
LDB3-208ENST00000623007 C1orf61Q13536 156 aa15.4■□□□□ 0.06
LDB3-208ENST00000623007 TCTE1Q5JU00 501 aa15.4■□□□□ 0.06
LDB3-208ENST00000623007 COLEC12Q5KU26 742 aa15.4■□□□□ 0.06
LDB3-208ENST00000623007 GALNT10Q86SR1 603 aa15.4■□□□□ 0.06
LDB3-208ENST00000623007 OR10Q1Q8NGQ4 319 aa15.4■□□□□ 0.06
LDB3-208ENST00000623007 PHF10Q8WUB8 498 aaKnown RBP15.4■□□□□ 0.06
LDB3-208ENST00000623007 ZNF566Q969W8 418 aa15.4■□□□□ 0.06
LDB3-208ENST00000623007 ZDHHC12Q96GR4 267 aa15.4■□□□□ 0.06
LDB3-208ENST00000623007 HSPA12BQ96MM6 686 aa15.4■□□□□ 0.06
LDB3-208ENST00000623007 MACROD1Q9BQ69 325 aa15.4■□□□□ 0.06
LDB3-208ENST00000623007 GABARAPL3Q9BY60 117 aa15.4■□□□□ 0.06
LDB3-208ENST00000623007 GRIP2Q9C0E4 1043 aa15.4■□□□□ 0.06
LDB3-208ENST00000623007 CDH23Q9H251 3354 aa15.4■□□□□ 0.06
LDB3-208ENST00000623007 KCND3Q9UK17 655 aa15.4■□□□□ 0.06
LDB3-208ENST00000623007 SIT1Q9Y3P8 196 aa15.4■□□□□ 0.06
LDB3-208ENST00000623007 MAGED1Q9Y5V3 778 aaPredicted RBP15.4■□□□□ 0.06
LDB3-208ENST00000623007 ARHGEF17Q96PE2 2063 aaPredicted RBP15.39■□□□□ 0.05
LDB3-208ENST00000623007 GLOD5A6NK44 160 aa15.39■□□□□ 0.05
LDB3-208ENST00000623007 ZNF701M0R085 212 aaPredicted RBP15.39■□□□□ 0.05
LDB3-208ENST00000623007 SYT5O00445 386 aa15.39■□□□□ 0.05
LDB3-208ENST00000623007 STK25O00506 426 aa15.39■□□□□ 0.05
LDB3-208ENST00000623007 SNRNP200O75643 2136 aaKnown RBP15.39■□□□□ 0.05
LDB3-208ENST00000623007 GADD45GO95257 159 aa15.39■□□□□ 0.05
LDB3-208ENST00000623007 AK1P00568 194 aa15.39■□□□□ 0.05
LDB3-208ENST00000623007 OPN1SWP03999 348 aa15.39■□□□□ 0.05
LDB3-208ENST00000623007 WNT1P04628 370 aa15.39■□□□□ 0.05
LDB3-208ENST00000623007 ATP1B1P05026 303 aa15.39■□□□□ 0.05
LDB3-208ENST00000623007 CELA2BP08218 269 aaPredicted RBP15.39■□□□□ 0.05
LDB3-208ENST00000623007 OR12D1P0DN82 309 aa15.39■□□□□ 0.05
LDB3-208ENST00000623007 FEN1P39748 380 aaKnown RBP15.39■□□□□ 0.05
LDB3-208ENST00000623007 ALDH3B2P48448 385 aa15.39■□□□□ 0.05
LDB3-208ENST00000623007 DAPP51397 102 aa15.39■□□□□ 0.05
LDB3-208ENST00000623007 RAB38P57729 211 aa15.39■□□□□ 0.05
LDB3-208ENST00000623007 HPCAP84074 193 aa15.39■□□□□ 0.05
LDB3-208ENST00000623007 CEP68Q76N32 757 aa15.39■□□□□ 0.05
LDB3-208ENST00000623007 TAGAPQ8N103 731 aa15.39■□□□□ 0.05
LDB3-208ENST00000623007 TTC29Q8NA56 475 aaPredicted RBP15.39■□□□□ 0.05
LDB3-208ENST00000623007 ZCCHC10Q8TBK6 192 aa15.39■□□□□ 0.05
LDB3-208ENST00000623007 MAGED4Q96JG8 741 aa15.39■□□□□ 0.05
LDB3-208ENST00000623007 CNDP2Q96KP4 475 aaKnown RBP15.39■□□□□ 0.05
LDB3-208ENST00000623007 PINK1Q9BXM7 581 aa15.39■□□□□ 0.05
LDB3-208ENST00000623007 AMBRA1Q9C0C7 1298 aa15.39■□□□□ 0.05
LDB3-208ENST00000623007 C2orf42Q9NWW7 574 aa15.39■□□□□ 0.05
LDB3-208ENST00000623007 GIN1Q9NXP7 522 aa15.39■□□□□ 0.05
LDB3-208ENST00000623007 TMCC3Q9ULS5 477 aa15.39■□□□□ 0.05
LDB3-208ENST00000623007 SH3GLB1Q9Y371 365 aa15.39■□□□□ 0.05
LDB3-208ENST00000623007 HCN4Q9Y3Q4 1203 aa15.39■□□□□ 0.05
LDB3-208ENST00000623007 PCDHGB5Q9Y5G0 923 aa15.39■□□□□ 0.05
LDB3-208ENST00000623007 COMMD3-BMI1R4GMX3 469 aa15.39■□□□□ 0.05
LDB3-208ENST00000623007 C19orf67A6NJJ6 358 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 P2RX6O15547 441 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 SEC24DO94855 1032 aaPredicted RBP15.38■□□□□ 0.05
LDB3-208ENST00000623007 EIF2S1P05198 315 aaKnown RBP15.38■□□□□ 0.05
LDB3-208ENST00000623007 CPMP14384 443 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 CD247P20963 164 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 CASP9P55211 416 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 TEKQ02763 1124 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 FAM53BQ14153 422 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 C14orf28Q4W4Y0 310 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 BROXQ5VW32 411 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 CDC73Q6P1J9 531 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 TMEM107Q6UX40 140 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 ZNF605Q86T29 641 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 OFCC1Q8IZS5 231 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 OR2L13Q8N349 312 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 PARP8Q8N3A8 854 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 OR10G2Q8NGC3 310 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 OR4C15Q8NGM1 316 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 C1orf216Q8TAB5 229 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 ZNF675Q8TD23 568 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 ADAMTS15Q8TE58 950 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 FBLIM1Q8WUP2 373 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 KLHL6Q8WZ60 621 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 FCRL4Q96PJ5 515 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 TSC22D3Q99576 134 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 PITX2Q99697 317 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 MIR1-1HGQ9H1L0 117 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 CCNB1IP1Q9NPC3 277 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 PAPOLBQ9NRJ5 636 aaKnown RBP15.38■□□□□ 0.05
LDB3-208ENST00000623007 VNN3Q9NY84 501 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 SLC13A4Q9UKG4 626 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 GMPPBQ9Y5P6 360 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 LOC105369274A0A096LPK9 316 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 LOC102723532A0A0G2JNH3 316 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 TLCD2A6NGC4 264 aa15.38■□□□□ 0.05
LDB3-208ENST00000623007 PRAMEF10O60809 474 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms