RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 IGFBP1P08833 259 aaPredicted RBP9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 HNRNPCL4P0DMR1 293 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 OR12D1P0DN82 309 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 ACADMP11310 421 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 GSTM3P21266 225 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 TNFSF8P32971 234 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 CASP3P42574 277 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 PCYT1AP49585 367 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 SEPHS1P49903 392 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 CDK3Q00526 305 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 CDK5Q00535 292 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 HSPB3Q12988 150 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 GNA13Q14344 377 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 BCL2A1Q16548 175 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 SYPL1Q16563 259 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 C3orf38Q5JPI3 329 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 SPANXN2Q5MJ10 180 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 PIP5KL1Q5T9C9 394 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 FAM46CQ5VWP2 391 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 DESI1Q6ICB0 168 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 MRM1Q6IN84 353 aaKnown RBP9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 C1orf94Q6P1W5 598 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 AKAP14Q86UN6 197 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 HEATR4Q86WZ0 1026 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 RBM45Q8IUH3 476 aaKnown RBP9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 RAB42Q8N4Z0 105 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 FAM181AQ8N9Y4 354 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 TTLQ8NG68 377 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 OR9Q1Q8NGQ5 310 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 VANGL1Q8TAA9 524 aaPredicted RBP9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 HTRA1Q92743 480 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 MOAP1Q96BY2 351 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 PRRC1Q96M27 445 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 AMDHD1Q96NU7 426 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 CAMK1GQ96NX5 476 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 PRAP1Q96NZ9 151 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 TREX2Q9BQ50 279 aaPredicted RBP9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 WFDC6Q9BQY6 131 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 SLC30A2Q9BRI3 323 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 DPH7Q9BTV6 452 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 CNPPD1Q9BV87 410 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 FAIM2Q9BWQ8 316 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 PINK1Q9BXM7 581 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 TEX101Q9BY14 249 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 AICDAQ9GZX7 198 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 MVB12BQ9H7P6 319 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 FGF20Q9NP95 211 aaPredicted RBP9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 PRSS16Q9NQE7 514 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 SLC35C2Q9NQQ7 365 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 NDUFB11Q9NX14 153 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 TEX10Q9NXF1 929 aaPredicted RBP9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 FBXL12Q9NXK8 326 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 SEC14L3Q9UDX4 400 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 TESQ9UGI8 421 aaKnown RBP9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 CLEC2DQ9UHP7 191 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 HCN2Q9UL51 889 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 GRIP1Q9Y3R0 1128 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 PRKAB1Q9Y478 270 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 PCDHGA4Q9Y5G9 962 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 SNX11Q9Y5W9 270 aa9.09□□□□□ -0.95
IGHV3-54-201ENST00000622166 IQCMA0A1B0GVH7 501 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 FEZF1A0PJY2 475 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 HTR3EA5X5Y0 456 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 SYT5O00445 386 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 STK25O00506 426 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 MAN2B1O00754 1011 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 CASC3O15234 703 aaKnown RBP9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 OR1F1O43749 312 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 DYRK3O43781 588 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 LCMT2O60294 686 aaKnown RBP9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 TPST2O60704 377 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 KCNJ13O60928 360 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 NME6O75414 186 aaPredicted RBP9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 UGT2B17O75795 530 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 SOX14O95416 240 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 RAB36O95755 333 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 EPPINO95925 133 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 DNTTP04053 509 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 HBQ1P09105 142 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 SLC35G4P0C7Q5 338 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 NR2F1P10589 423 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 CKMT1AP12532 417 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 CPEP16870 476 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 MMP11P24347 488 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 PSMA1P25786 263 aaKnown RBP9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 PSMB5P28074 263 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 PPP2R1BP30154 601 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 NTSP30990 170 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 RPS19P39019 145 aaKnown RBP9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 VIPR2P41587 438 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 GIPRP48546 466 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 RORCP51449 518 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 GAS1P54826 345 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 TPTEP56180 551 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 TAS2R38P59533 333 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 PRDX1Q06830 199 aaKnown RBP9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 TARDBPQ13148 414 aaKnown RBP eCLIP9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 TP53BP2Q13625 1128 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 GINS1Q14691 196 aa9.08□□□□□ -0.96
IGHV3-54-201ENST00000622166 KCNJ8Q15842 424 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms