RNA–Protein interactions for RNA: ENST00000621582.1

SRGAP2B-206, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

TSL 5

Gene SRGAP2B, Length 486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-206ENST00000621582 CNPPD1Q9BV87 410 aa4.39□□□□□ -1.71
SRGAP2B-206ENST00000621582 EBPLQ9BY08 206 aa4.39□□□□□ -1.71
SRGAP2B-206ENST00000621582 ZNF717Q9BY31 904 aaPredicted RBP4.39□□□□□ -1.71
SRGAP2B-206ENST00000621582 GSX2Q9BZM3 304 aa4.39□□□□□ -1.71
SRGAP2B-206ENST00000621582 BRINP2Q9C0B6 783 aa4.39□□□□□ -1.71
SRGAP2B-206ENST00000621582 SEMA4CQ9C0C4 833 aa4.39□□□□□ -1.71
SRGAP2B-206ENST00000621582 TNFRSF12AQ9NP84 129 aa4.39□□□□□ -1.71
SRGAP2B-206ENST00000621582 INTS9Q9NV88 658 aaKnown RBP4.39□□□□□ -1.71
SRGAP2B-206ENST00000621582 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.39□□□□□ -1.71
SRGAP2B-206ENST00000621582 TEX10Q9NXF1 929 aaPredicted RBP4.39□□□□□ -1.71
SRGAP2B-206ENST00000621582 PLA2G3Q9NZ20 509 aa4.39□□□□□ -1.71
SRGAP2B-206ENST00000621582 SH3BP4Q9P0V3 963 aa4.39□□□□□ -1.71
SRGAP2B-206ENST00000621582 GMPR2Q9P2T1 348 aaKnown RBP4.39□□□□□ -1.71
SRGAP2B-206ENST00000621582 UTS2RQ9UKP6 389 aa4.39□□□□□ -1.71
SRGAP2B-206ENST00000621582 ENTPD4Q9Y227 616 aa4.39□□□□□ -1.71
SRGAP2B-206ENST00000621582 EIF3LQ9Y262 564 aaKnown RBP4.39□□□□□ -1.71
SRGAP2B-206ENST00000621582 B3GNT3Q9Y2A9 372 aa4.39□□□□□ -1.71
SRGAP2B-206ENST00000621582 TMED5Q9Y3A6 229 aa4.39□□□□□ -1.71
SRGAP2B-206ENST00000621582 PCDHA9Q9Y5H5 950 aa4.39□□□□□ -1.71
SRGAP2B-206ENST00000621582 LOC400499M0QZD8 3231 aa4.39□□□□□ -1.71
SRGAP2B-206ENST00000621582 ZZEF1O43149 2961 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 TRAV17A0A0B4J275 112 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 TRPC5OSA6NMA1 111 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 GABRR3A8MPY1 467 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 A8MVJ9 347 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 TMEM233B4DJY2 109 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 K7EM74 188 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 LSM1O15116 133 aaKnown RBP4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 AKAP10O43572 662 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 SLC28A2O43868 658 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 VPS4BO75351 444 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 BCAS2O75934 225 aaPredicted RBP4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 LRATO95237 230 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 WDPCPO95876 746 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 GHRHP01286 108 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 PRPS2P11908 318 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 CPMP14384 443 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 DDCP20711 480 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 PRPH2P23942 346 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 GALNSP34059 522 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 RPL3P39023 403 aaKnown RBP4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 ASMTP46597 345 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 CYB561P49447 251 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 EFNA3P52797 238 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 ERVK-8P63133 956 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 PPP2R2AP63151 447 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 RPL38P63173 70 aaKnown RBP4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 BST1Q10588 318 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 RPS6KA2Q15349 733 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 PDCD2Q16342 344 aaPredicted RBP4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 ZNF750Q32MQ0 723 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 UGT3A2Q3SY77 523 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 NADK2Q4G0N4 442 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 RFTN2Q52LD8 501 aaPredicted RBP4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 TTMPQ5BVD1 217 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 COLEC12Q5KU26 742 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 IL23RQ5VWK5 629 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 FAM219BQ5XKK7 198 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 NXNQ6DKJ4 435 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 FAM180BQ6P0A1 224 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 IGFL3Q6UXB1 125 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 RNF111Q6ZNA4 994 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 RNF165Q6ZSG1 346 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 R3HCC1LQ7Z5L2 792 aaKnown RBP4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 TICAM1Q8IUC6 712 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 CRLF3Q8IUI8 442 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 WDR75Q8IWA0 830 aaKnown RBP4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 LRRC25Q8N386 305 aaPredicted RBP4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 ZNF843Q8N446 348 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 KIF2BQ8N4N8 673 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 APCDD1LQ8NCL9 501 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 CATSPER1Q8NEC5 780 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 NFAM1Q8NET5 270 aaPredicted RBP4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 SLC2A12Q8TD20 617 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 ELP5Q8TE02 316 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 DOK4Q8TEW6 326 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 PSMF1Q92530 271 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 ZNF75CPQ92670 426 aaPredicted RBP4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 HAS2Q92819 552 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 UCN3Q969E3 161 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 PNPLA2Q96AD5 504 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 TMEM125Q96AQ2 219 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 PPCDCQ96CD2 204 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 TSSK3Q96PN8 268 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 SH3GL2Q99962 352 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 WDR77Q9BQA1 342 aaPredicted RBP4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 NUF2Q9BZD4 464 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 TUBB1Q9H4B7 451 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 LIN7BQ9HAP6 207 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 ZBTB20Q9HC78 741 aaPredicted RBP4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 SLC35C2Q9NQQ7 365 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 PNPOQ9NVS9 261 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 HPF1Q9NWY4 346 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 SIRT5Q9NXA8 310 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 ANKRD10Q9NXR5 420 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 LRFN1Q9P244 771 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 BCAP29Q9UHQ4 241 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 BAIAP2L1Q9UHR4 511 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 ERVK-11Q9UQG0 969 aa4.38□□□□□ -1.71
SRGAP2B-206ENST00000621582 ERVK-19Q9WJR5 959 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms