RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 PAPLNO95428 1278 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 MMP11P24347 488 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 MYL9P24844 172 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 GABRA5P31644 462 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 GNG2P59768 71 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 MRPS15P82914 257 aaKnown RBP12.38□□□□□ -0.43
SKP2-209ENST00000620197 SREBF2Q12772 1141 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 RAB40BQ12829 278 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 HNRNPA0Q13151 305 aaKnown RBP12.38□□□□□ -0.43
SKP2-209ENST00000620197 DCST1Q5T197 706 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 SETD7Q8WTS6 366 aaKnown RBP12.38□□□□□ -0.43
SKP2-209ENST00000620197 MENTQ9BUN1 341 aa12.38□□□□□ -0.43
SKP2-209ENST00000620197 BCHEP06276 602 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 OR12D1P0DN82 309 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 ACP2P11117 423 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 RPS25P62851 125 aaKnown RBP12.37□□□□□ -0.43
SKP2-209ENST00000620197 GPLD1P80108 840 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 SYTL3Q4VX76 610 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 LAMTOR1Q6IAA8 161 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 ACSM5Q6NUN0 579 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 PODNL1Q6PEZ8 512 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 ANGPTL8Q6UXH0 198 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 TCEANCQ8N8B7 351 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 ANGPTL6Q8NI99 470 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 NIPAL2Q9H841 368 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 NUFIP1Q9UHK0 495 aaKnown RBP12.37□□□□□ -0.43
SKP2-209ENST00000620197 LIPT1Q9Y234 373 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 GPSM3Q9Y4H4 160 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 J3QRE1 110 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 SGK494L7N484 410 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 MMP20O60882 483 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 URODP06132 367 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 LIMS3P0CW19 117 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 LIMS4P0CW20 117 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 ACADMP11310 421 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 P2RX3P56373 397 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 FABP5Q01469 135 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 NDUFA9Q16795 377 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 TMIGD1Q6UXZ0 262 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 ZNF547Q8IVP9 402 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 POGLUT1Q8NBL1 392 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 ZNF740Q8NDX6 193 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 OR4M1Q8NGD0 313 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 OR9A1PQ8NGU1 263 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 ZBED6CLQ96FA7 236 aaPredicted RBP12.37□□□□□ -0.43
SKP2-209ENST00000620197 SENP5Q96HI0 755 aaPredicted RBP12.37□□□□□ -0.43
SKP2-209ENST00000620197 FRMD6Q96NE9 622 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 TEFMQ96QE5 360 aaKnown RBP12.37□□□□□ -0.43
SKP2-209ENST00000620197 ATF6BQ99941 703 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 MARVELD1Q9BSK0 173 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 POLR2J3Q9H1A7 115 aaKnown RBP12.37□□□□□ -0.43
SKP2-209ENST00000620197 SLC25A13Q9UJS0 675 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 FBXW2Q9UKT8 454 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 PCDHGB7Q9Y5F8 929 aa12.37□□□□□ -0.43
SKP2-209ENST00000620197 LEFTY1O75610 366 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 SDC2P34741 201 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 DGKEP52429 567 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 RPS26P62854 115 aaKnown RBP12.36□□□□□ -0.43
SKP2-209ENST00000620197 FUT5Q11128 374 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 C22orf42Q6IC83 251 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 LCTLQ6UWM7 567 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 PRICKLE2Q7Z3G6 844 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 GPR65Q8IYL9 337 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 CELF5Q8N6W0 485 aaKnown RBP12.36□□□□□ -0.43
SKP2-209ENST00000620197 VN1R2Q8NFZ6 395 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 GRPEL2Q8TAA5 225 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 JPH3Q8WXH2 748 aaPredicted RBP12.36□□□□□ -0.43
SKP2-209ENST00000620197 SORBS1Q9BX66 1292 aaKnown RBP12.36□□□□□ -0.43
SKP2-209ENST00000620197 ABCG4Q9H172 646 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 SAGE1Q9NXZ1 904 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 TAS2R7Q9NYW3 318 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 YARS2Q9Y2Z4 477 aaKnown RBP12.36□□□□□ -0.43
SKP2-209ENST00000620197 TRDV1A0A1B0GX56 115 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 ZNF780AO75290 641 aaPredicted RBP12.36□□□□□ -0.43
SKP2-209ENST00000620197 PDE9AO76083 593 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 GALP22466 123 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 GIPRP48546 466 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 GZMKP49863 264 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 CLDN20P56880 219 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 FAPQ12884 760 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 ZNF155Q12901 538 aaPredicted RBP12.36□□□□□ -0.43
SKP2-209ENST00000620197 DDI2Q5TDH0 399 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 SIGIRRQ6IA17 410 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 LIPIQ6XZB0 460 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 RFPL4BQ6ZWI9 263 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 LINC00471Q8N535 108 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 DCLRE1CQ96SD1 692 aaKnown RBP12.36□□□□□ -0.43
SKP2-209ENST00000620197 TREX2Q9BQ50 279 aaPredicted RBP12.36□□□□□ -0.43
SKP2-209ENST00000620197 BCL2L10Q9HD36 194 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 NEUROD4Q9HD90 331 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 KLHL20Q9Y2M5 609 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 SHISA3A0PJX4 238 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 CCDC182A6NF36 153 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 PRRG1O14668 218 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 C1QBP02746 253 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 AZGP1P25311 298 aaKnown RBP12.36□□□□□ -0.43
SKP2-209ENST00000620197 GSTM5P46439 218 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 GPR19Q15760 415 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 ATAT1Q5SQI0 421 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 FAM131AQ6UXB0 335 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms