RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 NEURL3Q96EH8 262 aa7□□□□□ -1.29
VPS45-213ENST00000618148 SLC46A1Q96NT5 459 aa7□□□□□ -1.29
VPS45-213ENST00000618148 BBS4Q96RK4 519 aa7□□□□□ -1.29
VPS45-213ENST00000618148 CPPED1Q9BRF8 314 aaPredicted RBP7□□□□□ -1.29
VPS45-213ENST00000618148 PELOQ9BRX2 385 aaKnown RBP7□□□□□ -1.29
VPS45-213ENST00000618148 SLC39A3Q9BRY0 314 aa7□□□□□ -1.29
VPS45-213ENST00000618148 RBCK1Q9BYM8 510 aa7□□□□□ -1.29
VPS45-213ENST00000618148 SLC7A5P2Q9GIP4 190 aa7□□□□□ -1.29
VPS45-213ENST00000618148 NRSN2Q9GZP1 204 aa7□□□□□ -1.29
VPS45-213ENST00000618148 VN1R1Q9GZP7 353 aa7□□□□□ -1.29
VPS45-213ENST00000618148 MMADHCQ9H3L0 296 aaPredicted RBP7□□□□□ -1.29
VPS45-213ENST00000618148 CXorf36Q9H7Y0 433 aa7□□□□□ -1.29
VPS45-213ENST00000618148 AKIRIN1Q9H9L7 192 aaPredicted RBP7□□□□□ -1.29
VPS45-213ENST00000618148 NANOGQ9H9S0 305 aa7□□□□□ -1.29
VPS45-213ENST00000618148 ASCL3Q9NQ33 180 aa7□□□□□ -1.29
VPS45-213ENST00000618148 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7□□□□□ -1.29
VPS45-213ENST00000618148 FOXJ2Q9P0K8 574 aa7□□□□□ -1.29
VPS45-213ENST00000618148 TMEM181Q9P2C4 612 aa7□□□□□ -1.29
VPS45-213ENST00000618148 IFT80Q9P2H3 777 aaPredicted RBP7□□□□□ -1.29
VPS45-213ENST00000618148 ZNF639Q9UID6 485 aa7□□□□□ -1.29
VPS45-213ENST00000618148 CROTQ9UKG9 612 aa7□□□□□ -1.29
VPS45-213ENST00000618148 PRPF19Q9UMS4 504 aaKnown RBP7□□□□□ -1.29
VPS45-213ENST00000618148 WASF3Q9UPY6 502 aa7□□□□□ -1.29
VPS45-213ENST00000618148 SDK2Q58EX2 2172 aa7□□□□□ -1.29
VPS45-213ENST00000618148 A0A087WV62 115 aa7□□□□□ -1.29
VPS45-213ENST00000618148 ERICH4A6NGS2 130 aa7□□□□□ -1.29
VPS45-213ENST00000618148 AGRPO00253 132 aa7□□□□□ -1.29
VPS45-213ENST00000618148 PCDH17O14917 1159 aa7□□□□□ -1.29
VPS45-213ENST00000618148 GYG2O15488 501 aa7□□□□□ -1.29
VPS45-213ENST00000618148 GSC2O15499 205 aa7□□□□□ -1.29
VPS45-213ENST00000618148 B4GALT2O60909 372 aa7□□□□□ -1.29
VPS45-213ENST00000618148 LDB3O75112 727 aa7□□□□□ -1.29
VPS45-213ENST00000618148 KLF7O75840 302 aaPredicted RBP7□□□□□ -1.29
VPS45-213ENST00000618148 DNAJC8O75937 253 aaPredicted RBP7□□□□□ -1.29
VPS45-213ENST00000618148 TNFSF15O95150 251 aa7□□□□□ -1.29
VPS45-213ENST00000618148 CD63P08962 238 aa7□□□□□ -1.29
VPS45-213ENST00000618148 RAB40ALP0C0E4 278 aa7□□□□□ -1.29
VPS45-213ENST00000618148 BMP2P12643 396 aa7□□□□□ -1.29
VPS45-213ENST00000618148 GPX2P18283 190 aa7□□□□□ -1.29
VPS45-213ENST00000618148 EFNA1P20827 205 aaPredicted RBP7□□□□□ -1.29
VPS45-213ENST00000618148 MAOAP21397 527 aa7□□□□□ -1.29
VPS45-213ENST00000618148 UQCRC2P22695 453 aa7□□□□□ -1.29
VPS45-213ENST00000618148 PPIBP23284 216 aaKnown RBP7□□□□□ -1.29
VPS45-213ENST00000618148 FEN1P39748 380 aaKnown RBP7□□□□□ -1.29
VPS45-213ENST00000618148 STT3AP46977 705 aa7□□□□□ -1.29
VPS45-213ENST00000618148 CDK9P50750 372 aaKnown RBP7□□□□□ -1.29
VPS45-213ENST00000618148 NCBP2P52298 156 aaKnown RBP eCLIP7□□□□□ -1.29
VPS45-213ENST00000618148 BTG2P78543 158 aa7□□□□□ -1.29
VPS45-213ENST00000618148 PLIN5Q00G26 463 aa7□□□□□ -1.29
VPS45-213ENST00000618148 OCA2Q04671 838 aa7□□□□□ -1.29
VPS45-213ENST00000618148 VAC14Q08AM6 782 aa7□□□□□ -1.29
VPS45-213ENST00000618148 MAP4K2Q12851 820 aa7□□□□□ -1.29
VPS45-213ENST00000618148 ERV3-1Q14264 604 aa7□□□□□ -1.29
VPS45-213ENST00000618148 NCF4Q15080 339 aa7□□□□□ -1.29
VPS45-213ENST00000618148 PRICKLE4Q2TBC4 344 aa7□□□□□ -1.29
VPS45-213ENST00000618148 GTDC1Q4AE62 458 aa7□□□□□ -1.29
VPS45-213ENST00000618148 VWA2Q5GFL6 755 aa7□□□□□ -1.29
VPS45-213ENST00000618148 PIGGQ5H8A4 983 aa7□□□□□ -1.29
VPS45-213ENST00000618148 EXOSC6Q5RKV6 272 aaKnown RBP7□□□□□ -1.29
VPS45-213ENST00000618148 SAXO2Q658L1 398 aa7□□□□□ -1.29
VPS45-213ENST00000618148 FAM180BQ6P0A1 224 aa7□□□□□ -1.29
VPS45-213ENST00000618148 PGM2L1Q6PCE3 622 aa7□□□□□ -1.29
VPS45-213ENST00000618148 C6orf15Q6UXA7 325 aaPredicted RBP7□□□□□ -1.29
VPS45-213ENST00000618148 DNAJC14Q6Y2X3 702 aaPredicted RBP7□□□□□ -1.29
VPS45-213ENST00000618148 BNC2Q6ZN30 1099 aaPredicted RBP7□□□□□ -1.29
VPS45-213ENST00000618148 SLC15A3Q8IY34 581 aa7□□□□□ -1.29
VPS45-213ENST00000618148 CCDC116Q8IYX3 515 aa7□□□□□ -1.29
VPS45-213ENST00000618148 DEFB107AQ8IZN7 70 aa7□□□□□ -1.29
VPS45-213ENST00000618148 OR2L13Q8N349 312 aa7□□□□□ -1.29
VPS45-213ENST00000618148 TRIML2Q8N7C3 387 aa7□□□□□ -1.29
VPS45-213ENST00000618148 GALNT6Q8NCL4 622 aa7□□□□□ -1.29
VPS45-213ENST00000618148 OR4A15Q8NGL6 344 aa7□□□□□ -1.29
VPS45-213ENST00000618148 MIPOL1Q8TD10 442 aa7□□□□□ -1.29
VPS45-213ENST00000618148 HOXB13Q92826 284 aaPredicted RBP7□□□□□ -1.29
VPS45-213ENST00000618148 UTP4Q969X6 686 aaKnown RBP7□□□□□ -1.29
VPS45-213ENST00000618148 TMEM125Q96AQ2 219 aa7□□□□□ -1.29
VPS45-213ENST00000618148 MOAP1Q96BY2 351 aa7□□□□□ -1.29
VPS45-213ENST00000618148 ELP4Q96EB1 424 aa7□□□□□ -1.29
VPS45-213ENST00000618148 ZNF578Q96N58 590 aaPredicted RBP7□□□□□ -1.29
VPS45-213ENST00000618148 SH3GL1Q99961 368 aa7□□□□□ -1.29
VPS45-213ENST00000618148 CADM1Q9BY67 442 aaKnown RBP7□□□□□ -1.29
VPS45-213ENST00000618148 CHST8Q9H2A9 424 aa7□□□□□ -1.29
VPS45-213ENST00000618148 IKZF5Q9H5V7 419 aa7□□□□□ -1.29
VPS45-213ENST00000618148 KAT8Q9H7Z6 458 aaKnown RBP7□□□□□ -1.29
VPS45-213ENST00000618148 CXorf21Q9HAI6 301 aa7□□□□□ -1.29
VPS45-213ENST00000618148 SPAG4Q9NPE6 437 aa7□□□□□ -1.29
VPS45-213ENST00000618148 NECTIN3Q9NQS3 549 aa7□□□□□ -1.29
VPS45-213ENST00000618148 SEMA3GQ9NS98 782 aa7□□□□□ -1.29
VPS45-213ENST00000618148 GPATCH2Q9NW75 528 aa7□□□□□ -1.29
VPS45-213ENST00000618148 CMTM6Q9NX76 183 aa7□□□□□ -1.29
VPS45-213ENST00000618148 MAT2BQ9NZL9 334 aa7□□□□□ -1.29
VPS45-213ENST00000618148 PTGFRNQ9P2B2 879 aa7□□□□□ -1.29
VPS45-213ENST00000618148 CD300AQ9UGN4 299 aa7□□□□□ -1.29
VPS45-213ENST00000618148 VPS4AQ9UN37 437 aa7□□□□□ -1.29
VPS45-213ENST00000618148 PCDHGB4Q9UN71 923 aa7□□□□□ -1.29
VPS45-213ENST00000618148 PPIEQ9UNP9 301 aaKnown RBP7□□□□□ -1.29
VPS45-213ENST00000618148 AP3M1Q9Y2T2 418 aa7□□□□□ -1.29
VPS45-213ENST00000618148 NUP214P35658 2090 aaPredicted RBP6.99□□□□□ -1.29
VPS45-213ENST00000618148 SPTBN4Q9H254 2564 aa6.99□□□□□ -1.29
VPS45-213ENST00000618148 FAM149AA5PLN7 773 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms