RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 ZNF3P17036 446 aa6.91□□□□□ -1.3
CSDE1-218ENST00000610726 ADPRHP54922 357 aa6.91□□□□□ -1.3
CSDE1-218ENST00000610726 BNIP3Q12983 259 aa6.91□□□□□ -1.3
CSDE1-218ENST00000610726 MLF2Q15773 248 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-218ENST00000610726 CDKN3Q16667 212 aa6.91□□□□□ -1.3
CSDE1-218ENST00000610726 GFOD2Q3B7J2 385 aa6.91□□□□□ -1.3
CSDE1-218ENST00000610726 UGT3A2Q3SY77 523 aa6.91□□□□□ -1.3
CSDE1-218ENST00000610726 TMEM52BQ4KMG9 183 aa6.91□□□□□ -1.3
CSDE1-218ENST00000610726 ADAMTSL4Q6UY14 1074 aa6.91□□□□□ -1.3
CSDE1-218ENST00000610726 RNF111Q6ZNA4 994 aa6.91□□□□□ -1.3
CSDE1-218ENST00000610726 FAM160A2Q8N612 972 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-218ENST00000610726 FRMD1Q8N878 549 aa6.91□□□□□ -1.3
CSDE1-218ENST00000610726 OR56A3Q8NH54 315 aa6.91□□□□□ -1.3
CSDE1-218ENST00000610726 NRG4Q8WWG1 115 aa6.91□□□□□ -1.3
CSDE1-218ENST00000610726 ALOXE3Q9BYJ1 711 aa6.91□□□□□ -1.3
CSDE1-218ENST00000610726 YTHDF1Q9BYJ9 559 aaKnown RBP6.91□□□□□ -1.3
CSDE1-218ENST00000610726 TNFRSF12AQ9NP84 129 aa6.91□□□□□ -1.3
CSDE1-218ENST00000610726 KCMF1Q9P0J7 381 aa6.91□□□□□ -1.3
CSDE1-218ENST00000610726 RARRES3Q9UL19 164 aa6.91□□□□□ -1.3
CSDE1-218ENST00000610726 MAN2B2Q9Y2E5 1009 aa6.91□□□□□ -1.3
CSDE1-218ENST00000610726 YBX2Q9Y2T7 364 aaKnown RBP6.91□□□□□ -1.3
CSDE1-218ENST00000610726 FER1L6Q2WGJ9 1857 aa6.91□□□□□ -1.3
CSDE1-218ENST00000610726 SRCAPQ6ZRS2 3230 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 ZNFX1Q9P2E3 1918 aaKnown RBP6.9□□□□□ -1.3
CSDE1-218ENST00000610726 RNASET2O00584 256 aaKnown RBP6.9□□□□□ -1.3
CSDE1-218ENST00000610726 TSC22D2O75157 780 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 RPP14O95059 124 aaKnown RBP6.9□□□□□ -1.3
CSDE1-218ENST00000610726 B3GALT4O96024 378 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 FESP07332 822 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 RHCEP18577 417 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 DCTP40126 519 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 EIF2DP41214 584 aaKnown RBP6.9□□□□□ -1.3
CSDE1-218ENST00000610726 DUSP3P51452 185 aaPredicted RBP6.9□□□□□ -1.3
CSDE1-218ENST00000610726 C1orf53Q5VUE5 145 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 KIAA0895LQ68EN5 471 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 ARL9Q6T311 187 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 KLHL24Q6TFL4 600 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 RPTNQ6XPR3 784 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 SLC36A4Q6YBV0 504 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 MCATQ8IVS2 390 aaKnown RBP6.9□□□□□ -1.3
CSDE1-218ENST00000610726 SLC5A8Q8N695 610 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 ANKFN1Q8N957 763 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 L3MBTL4Q8NA19 623 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 PROKR2Q8NFJ6 384 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 OR1E3Q8WZA6 343 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 FCGR1BQ92637 280 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 HTRA1Q92743 480 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 UFD1Q92890 307 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 TRNT1Q96Q11 434 aaKnown RBP6.9□□□□□ -1.3
CSDE1-218ENST00000610726 LGR4Q9BXB1 951 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 SERINC1Q9NRX5 453 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 CENPMQ9NSP4 180 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 LRIT1Q9P2V4 623 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 NCDNQ9UBB6 729 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 PAIP2BQ9ULR5 123 aaKnown RBP6.9□□□□□ -1.3
CSDE1-218ENST00000610726 NAALAD2Q9Y3Q0 740 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 APC2O95996 2303 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 IQCMA0A1B0GVH7 501 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 SEMA3DO95025 777 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 RENP00797 406 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 RETP07949 1114 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 BMP2P12643 396 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 GP1BBP13224 206 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 NKX3-2P78367 333 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 PLCXD2Q0VAA5 305 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 ST3GAL4Q11206 333 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 ERV3-1Q14264 604 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 SGCBQ16585 318 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 TCTE1Q5JU00 501 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 NIPAL1Q6NVV3 410 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 ARHGAP22Q7Z5H3 698 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 TMEM150AQ86TG1 271 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 ZNF683Q8IZ20 524 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 GOLM1Q8NBJ4 401 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 BORCS5Q969J3 196 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 GAL3ST3Q96A11 431 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 EFHD2Q96C19 240 aaPredicted RBP6.9□□□□□ -1.3
CSDE1-218ENST00000610726 ZNF419Q96HQ0 510 aaPredicted RBP6.9□□□□□ -1.3
CSDE1-218ENST00000610726 CFHR5Q9BXR6 569 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 DEFB126Q9BYW3 111 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 C6orf106Q9H6K1 298 aaPredicted RBP6.9□□□□□ -1.3
CSDE1-218ENST00000610726 MYNNQ9NPC7 610 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 PTTG2Q9NZH5 202 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 ABI3Q9P2A4 366 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 MALT1Q9UDY8 824 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 C19orf25Q9UFG5 118 aaPredicted RBP6.9□□□□□ -1.3
CSDE1-218ENST00000610726 ATAD5Q96QE3 1844 aa6.9□□□□□ -1.3
CSDE1-218ENST00000610726 CNOT1A5YKK6 2376 aaKnown RBP6.9□□□□□ -1.31
CSDE1-218ENST00000610726 NPIPA5A0A0B4J1W7 369 aa6.9□□□□□ -1.31
CSDE1-218ENST00000610726 A0A1W2PPW3 197 aa6.9□□□□□ -1.31
CSDE1-218ENST00000610726 SLC5A10A0PJK1 596 aa6.9□□□□□ -1.31
CSDE1-218ENST00000610726 SMIM30A4D0T7 59 aa6.9□□□□□ -1.31
CSDE1-218ENST00000610726 NPIPA7E9PJI5 369 aa6.9□□□□□ -1.31
CSDE1-218ENST00000610726 PEX12O00623 359 aa6.9□□□□□ -1.31
CSDE1-218ENST00000610726 VILLO15195 856 aa6.9□□□□□ -1.31
CSDE1-218ENST00000610726 ASNA1O43681 348 aa6.9□□□□□ -1.31
CSDE1-218ENST00000610726 TRAPPC6AO75865 159 aa6.9□□□□□ -1.31
CSDE1-218ENST00000610726 KLHL18O94889 574 aa6.9□□□□□ -1.31
CSDE1-218ENST00000610726 AHSA1O95433 338 aa6.9□□□□□ -1.31
CSDE1-218ENST00000610726 NPIPA8P0DM63 369 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms