RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 HCSTQ9UBK5 93 aa21.2■□□□□ 0.98
SHANK2-220ENST00000608988 TMA7Q9Y2S6 64 aaKnown RBP21.2■□□□□ 0.98
SHANK2-220ENST00000608988 PRR23AA6NEV1 266 aa21.2■□□□□ 0.98
SHANK2-220ENST00000608988 WASH3PC4AMC7 463 aa21.2■□□□□ 0.98
SHANK2-220ENST00000608988 TSPAN6O43657 245 aa21.2■□□□□ 0.98
SHANK2-220ENST00000608988 SH3BP5O60239 455 aa21.2■□□□□ 0.98
SHANK2-220ENST00000608988 IL3P08700 152 aa21.2■□□□□ 0.98
SHANK2-220ENST00000608988 PSKH1P11801 424 aa21.2■□□□□ 0.98
SHANK2-220ENST00000608988 NPPBP16860 134 aa21.2■□□□□ 0.98
SHANK2-220ENST00000608988 GALP22466 123 aa21.2■□□□□ 0.98
SHANK2-220ENST00000608988 GIPRP48546 466 aa21.2■□□□□ 0.98
SHANK2-220ENST00000608988 MRPL28Q13084 256 aaKnown RBP21.2■□□□□ 0.98
SHANK2-220ENST00000608988 GINS1Q14691 196 aa21.2■□□□□ 0.98
SHANK2-220ENST00000608988 TMEM44Q2T9K0 475 aa21.2■□□□□ 0.98
SHANK2-220ENST00000608988 BTBD16Q32M84 506 aa21.2■□□□□ 0.98
SHANK2-220ENST00000608988 MINDY4Q4G0A6 757 aa21.2■□□□□ 0.98
SHANK2-220ENST00000608988 CEP78Q5JTW2 689 aa21.2■□□□□ 0.98
SHANK2-220ENST00000608988 ENTPD8Q5MY95 495 aa21.2■□□□□ 0.98
SHANK2-220ENST00000608988 HENMT1Q5T8I9 393 aaKnown RBP21.2■□□□□ 0.98
SHANK2-220ENST00000608988 BICRALQ6AI39 1079 aa21.2■□□□□ 0.98
SHANK2-220ENST00000608988 GDPD4Q6W3E5 623 aa21.2■□□□□ 0.98
SHANK2-220ENST00000608988 ZNF782Q6ZMW2 699 aaPredicted RBP21.2■□□□□ 0.98
SHANK2-220ENST00000608988 MRGPREQ86SM8 312 aa21.2■□□□□ 0.98
SHANK2-220ENST00000608988 IFNL1Q8IU54 200 aa21.2■□□□□ 0.98
SHANK2-220ENST00000608988 ZNF480Q8WV37 535 aa21.2■□□□□ 0.98
SHANK2-220ENST00000608988 LRR1Q96L50 414 aa21.2■□□□□ 0.98
SHANK2-220ENST00000608988 QRFPRQ96P65 431 aa21.2■□□□□ 0.98
SHANK2-220ENST00000608988 NT5DC2Q9H857 520 aa21.2■□□□□ 0.98
SHANK2-220ENST00000608988 SLC25A13Q9UJS0 675 aa21.2■□□□□ 0.98
SHANK2-220ENST00000608988 COL4A6Q14031 1691 aa21.19■□□□□ 0.98
SHANK2-220ENST00000608988 TMEM202A6NGA9 273 aa21.19■□□□□ 0.98
SHANK2-220ENST00000608988 OR2AG2A6NM03 316 aa21.19■□□□□ 0.98
SHANK2-220ENST00000608988 NOS1APO75052 506 aaPredicted RBP21.19■□□□□ 0.98
SHANK2-220ENST00000608988 TGFB1P01137 390 aa21.19■□□□□ 0.98
SHANK2-220ENST00000608988 KLK1P06870 262 aa21.19■□□□□ 0.98
SHANK2-220ENST00000608988 AP2S1P53680 142 aaPredicted RBP21.19■□□□□ 0.98
SHANK2-220ENST00000608988 EPHB3P54753 998 aa21.19■□□□□ 0.98
SHANK2-220ENST00000608988 DSG2Q14126 1118 aa21.19■□□□□ 0.98
SHANK2-220ENST00000608988 PRSS53Q2L4Q9 553 aa21.19■□□□□ 0.98
SHANK2-220ENST00000608988 FLYWCH1Q4VC44 716 aa21.19■□□□□ 0.98
SHANK2-220ENST00000608988 NXPE4Q6UWF7 544 aa21.19■□□□□ 0.98
SHANK2-220ENST00000608988 DEF8Q6ZN54 512 aa21.19■□□□□ 0.98
SHANK2-220ENST00000608988 RFPL4BQ6ZWI9 263 aa21.19■□□□□ 0.98
SHANK2-220ENST00000608988 ZBED6CLQ96FA7 236 aaPredicted RBP21.19■□□□□ 0.98
SHANK2-220ENST00000608988 ZNF764Q96H86 408 aaPredicted RBP21.19■□□□□ 0.98
SHANK2-220ENST00000608988 DHRS9Q9BPW9 319 aa21.19■□□□□ 0.98
SHANK2-220ENST00000608988 PRRG3Q9BZD7 231 aa21.19■□□□□ 0.98
SHANK2-220ENST00000608988 OR51B5Q9H339 312 aa21.19■□□□□ 0.98
SHANK2-220ENST00000608988 ICMTO60725 284 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 SEMA7AO75326 666 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 C1orf105O95561 183 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 TNNI3P19429 210 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 APEX1P27695 318 aaKnown RBP21.18■□□□□ 0.98
SHANK2-220ENST00000608988 ESCO2Q56NI9 601 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 RPS26P11Q5JNZ5 115 aaPredicted RBP21.18■□□□□ 0.98
SHANK2-220ENST00000608988 PRICKLE2Q7Z3G6 844 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 HSD11B1LQ7Z5J1 315 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 WDR53Q7Z5U6 358 aaPredicted RBP21.18■□□□□ 0.98
SHANK2-220ENST00000608988 ELMOD2Q8IZ81 293 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 SLC7A13Q8TCU3 470 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 DNAJA4Q8WW22 397 aaPredicted RBP21.18■□□□□ 0.98
SHANK2-220ENST00000608988 SLC5A11Q8WWX8 675 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 AKAP1Q92667 903 aaKnown RBP eCLIP21.18■□□□□ 0.98
SHANK2-220ENST00000608988 ARHGAP9Q9BRR9 750 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 TMEM121BQ9BXQ6 578 aaPredicted RBP21.18■□□□□ 0.98
SHANK2-220ENST00000608988 EPHX3Q9H6B9 360 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 FOLH1BQ9HBA9 442 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 WDR70Q9NW82 654 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 POLHQ9Y253 713 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 KIF26AQ9ULI4 1882 aaPredicted RBP21.18■□□□□ 0.98
SHANK2-220ENST00000608988 A0A0X1KG70 313 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 CASKO14936 926 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 SHOXO15266 292 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 GRM6O15303 877 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 GBAP04062 536 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 SELPP16109 830 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 DDCP20711 480 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 CTSOP43234 321 aaPredicted RBP21.18■□□□□ 0.98
SHANK2-220ENST00000608988 PREPP48147 710 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 DGKEP52429 567 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 ABATP80404 500 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 ACSM1Q08AH1 577 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 IKZF1Q13422 519 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 ZNF284Q2VY69 593 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 C1orf94Q6P1W5 598 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 PAMR1Q6UXH9 720 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 C11orf74Q86VG3 221 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 TMEM145Q8NBT3 493 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 SETD7Q8WTS6 366 aaKnown RBP21.18■□□□□ 0.98
SHANK2-220ENST00000608988 ACOT12Q8WYK0 555 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 TM9SF4Q92544 642 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 TMEM203Q969S6 136 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 ATF6BQ99941 703 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 ATP13A2Q9NQ11 1180 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 CLEC4EQ9ULY5 219 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 A4GNTQ9UNA3 340 aa21.18■□□□□ 0.98
SHANK2-220ENST00000608988 CTSAP10619 480 aa21.17■□□□□ 0.98
SHANK2-220ENST00000608988 ARSBP15848 533 aa21.17■□□□□ 0.98
SHANK2-220ENST00000608988 INPP1P49441 399 aa21.17■□□□□ 0.98
SHANK2-220ENST00000608988 PODNL1Q6PEZ8 512 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms