RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 NF1P21359 2839 aa12.08□□□□□ -0.48
RPS28-204ENST00000602140 A0A096LPK6 155 aa12.08□□□□□ -0.48
RPS28-204ENST00000602140 C2orf92A0A1B0GVN3 265 aa12.08□□□□□ -0.48
RPS28-204ENST00000602140 A0A1W2PS29 197 aa12.08□□□□□ -0.48
RPS28-204ENST00000602140 CCDC189A1A4V9 331 aa12.08□□□□□ -0.48
RPS28-204ENST00000602140 HMX2A2RU54 273 aa12.08□□□□□ -0.48
RPS28-204ENST00000602140 FOXE1O00358 373 aaPredicted RBP12.08□□□□□ -0.48
RPS28-204ENST00000602140 PGRMC2O15173 223 aa12.08□□□□□ -0.48
RPS28-204ENST00000602140 KLHL2O95198 593 aa12.08□□□□□ -0.48
RPS28-204ENST00000602140 SIX3O95343 332 aaPredicted RBP12.08□□□□□ -0.48
RPS28-204ENST00000602140 GDF1P27539 372 aa12.08□□□□□ -0.48
RPS28-204ENST00000602140 SSTR4P31391 388 aa12.08□□□□□ -0.48
RPS28-204ENST00000602140 GALNSP34059 522 aa12.08□□□□□ -0.48
RPS28-204ENST00000602140 PIK3CGP48736 1102 aa12.08□□□□□ -0.48
RPS28-204ENST00000602140 FBXW4P57775 412 aa12.08□□□□□ -0.48
RPS28-204ENST00000602140 GUCY2DQ02846 1103 aa12.08□□□□□ -0.48
RPS28-204ENST00000602140 UAP1Q16222 522 aaPredicted RBP12.08□□□□□ -0.48
RPS28-204ENST00000602140 TMEM198Q66K66 360 aa12.08□□□□□ -0.48
RPS28-204ENST00000602140 SEM1Q6ZVN7 128 aa12.08□□□□□ -0.48
RPS28-204ENST00000602140 NUDT13Q86X67 352 aa12.08□□□□□ -0.48
RPS28-204ENST00000602140 ZZZ3Q8IYH5 903 aa12.08□□□□□ -0.48
RPS28-204ENST00000602140 L3MBTL4Q8NA19 623 aa12.08□□□□□ -0.48
RPS28-204ENST00000602140 WDR20Q8TBZ3 569 aa12.08□□□□□ -0.48
RPS28-204ENST00000602140 ZNF597Q96LX8 424 aa12.08□□□□□ -0.48
RPS28-204ENST00000602140 CXorf21Q9HAI6 301 aa12.08□□□□□ -0.48
RPS28-204ENST00000602140 DNAJB12Q9NXW2 375 aaKnown RBP12.08□□□□□ -0.48
RPS28-204ENST00000602140 PSD3Q9NYI0 1048 aa12.08□□□□□ -0.48
RPS28-204ENST00000602140 TNPO3Q9Y5L0 923 aaKnown RBP12.08□□□□□ -0.48
RPS28-204ENST00000602140 SPG11Q96JI7 2443 aa12.08□□□□□ -0.48
RPS28-204ENST00000602140 NCKAP5O14513 1909 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 C15orf38-AP3S2A0A0A6YYH1 394 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 ANKRD33BA6NCL7 494 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 HSPB2A8KAH6 182 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 CAPN14A8MX76 684 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 TP53I11O14683 189 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 TRIM3O75382 744 aaPredicted RBP12.07□□□□□ -0.48
RPS28-204ENST00000602140 CTAG2O75638 210 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 TRAPPC6AO75865 159 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 CLDN9O95484 217 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 PIK3R1P27986 724 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 TYK2P29597 1187 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 CASQ1P31415 396 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 UQCRC1P31930 480 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 ARL1P40616 181 aaPredicted RBP12.07□□□□□ -0.48
RPS28-204ENST00000602140 KIR2DL3P43628 341 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 IST1P53990 364 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 DUSP8Q13202 625 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 RPS6KA2Q15349 733 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 HSPB2Q16082 182 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 TBCELQ5QJ74 424 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 HLA-DQA1Q5Y7H0 255 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 BICRALQ6AI39 1079 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 OR52E8Q6IFG1 317 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 KLC3Q6P597 504 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 GALNT12Q8IXK2 581 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 ZNF441Q8N8Z8 693 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 ATP6V1E2Q96A05 226 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 TP53INP1Q96A56 240 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 GPR78Q96P69 363 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 CDK15Q96Q40 435 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 SERPINI1Q99574 410 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 VPS11Q9H270 941 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 NOL11Q9H8H0 719 aaKnown RBP12.07□□□□□ -0.48
RPS28-204ENST00000602140 TEX10Q9NXF1 929 aaPredicted RBP12.07□□□□□ -0.48
RPS28-204ENST00000602140 NPFFR2Q9Y5X5 522 aa12.07□□□□□ -0.48
RPS28-204ENST00000602140 AHRRA9YTQ3 701 aa12.06□□□□□ -0.48
RPS28-204ENST00000602140 KDM4EB2RXH2 506 aaPredicted RBP12.06□□□□□ -0.48
RPS28-204ENST00000602140 OR7A17O14581 309 aa12.06□□□□□ -0.48
RPS28-204ENST00000602140 SEMA3DO95025 777 aa12.06□□□□□ -0.48
RPS28-204ENST00000602140 ACSL3O95573 720 aa12.06□□□□□ -0.48
RPS28-204ENST00000602140 ALDOAP04075 364 aaKnown RBP12.06□□□□□ -0.48
RPS28-204ENST00000602140 CT62P0C5K7 136 aa12.06□□□□□ -0.48
RPS28-204ENST00000602140 BMP5P22003 454 aa12.06□□□□□ -0.48
RPS28-204ENST00000602140 MASP1P48740 699 aa12.06□□□□□ -0.48
RPS28-204ENST00000602140 CCNG1P51959 295 aa12.06□□□□□ -0.48
RPS28-204ENST00000602140 WNT3P56703 355 aa12.06□□□□□ -0.48
RPS28-204ENST00000602140 SLC7A5Q01650 507 aa12.06□□□□□ -0.48
RPS28-204ENST00000602140 CRYZQ08257 329 aaKnown RBP12.06□□□□□ -0.48
RPS28-204ENST00000602140 FUT7Q11130 342 aa12.06□□□□□ -0.48
RPS28-204ENST00000602140 ACSF3Q4G176 576 aaPredicted RBP12.06□□□□□ -0.48
RPS28-204ENST00000602140 TECRLQ5HYJ1 363 aa12.06□□□□□ -0.48
RPS28-204ENST00000602140 METTL2BQ6P1Q9 378 aaKnown RBP12.06□□□□□ -0.48
RPS28-204ENST00000602140 PLD6Q8N2A8 252 aaKnown RBP12.06□□□□□ -0.48
RPS28-204ENST00000602140 ZNF615Q8N8J6 731 aa12.06□□□□□ -0.48
RPS28-204ENST00000602140 PTGR2Q8N8N7 351 aaPredicted RBP12.06□□□□□ -0.48
RPS28-204ENST00000602140 RELL2Q8NC24 303 aaPredicted RBP12.06□□□□□ -0.48
RPS28-204ENST00000602140 NAXEQ8NCW5 288 aa12.06□□□□□ -0.48
RPS28-204ENST00000602140 TNIP2Q8NFZ5 429 aa12.06□□□□□ -0.48
RPS28-204ENST00000602140 OR4K14Q8NGD5 310 aa12.06□□□□□ -0.48
RPS28-204ENST00000602140 OR52B6Q8NGF0 335 aa12.06□□□□□ -0.48
RPS28-204ENST00000602140 SPPL2AQ8TCT8 520 aa12.06□□□□□ -0.48
RPS28-204ENST00000602140 ANP32BQ92688 251 aaKnown RBP12.06□□□□□ -0.48
RPS28-204ENST00000602140 PHF21BQ96EK2 531 aa12.06□□□□□ -0.48
RPS28-204ENST00000602140 RILPQ96NA2 401 aa12.06□□□□□ -0.48
RPS28-204ENST00000602140 GNRHR2Q96P88 292 aa12.06□□□□□ -0.48
RPS28-204ENST00000602140 TIMP4Q99727 224 aa12.06□□□□□ -0.48
RPS28-204ENST00000602140 GPATCH1Q9BRR8 931 aaKnown RBP12.06□□□□□ -0.48
RPS28-204ENST00000602140 POLDIP3Q9BY77 421 aaKnown RBP12.06□□□□□ -0.48
RPS28-204ENST00000602140 ZNF358Q9NW07 568 aa12.06□□□□□ -0.48
RPS28-204ENST00000602140 CRIM1Q9NZV1 1036 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms