RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 PPCDCQ96CD2 204 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 CMTM5Q96DZ9 223 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 SPDL1Q96EA4 605 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 IMMP1LQ96LU5 166 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 ZNF700Q9H0M5 742 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 WDR41Q9HAD4 459 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 SH3BP4Q9P0V3 963 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 FREM3P0C091 2139 aa14.02□□□□□ -0.17
TRIM28-207ENST00000597136 A0A1W2PS29 197 aa14.01□□□□□ -0.17
TRIM28-207ENST00000597136 TCRBV16S1A1N1A0A5B0 115 aa14.01□□□□□ -0.17
TRIM28-207ENST00000597136 EBAG9O00559 213 aa14.01□□□□□ -0.17
TRIM28-207ENST00000597136 FGF17O60258 216 aa14.01□□□□□ -0.17
TRIM28-207ENST00000597136 UBOX5O94941 541 aa14.01□□□□□ -0.17
TRIM28-207ENST00000597136 PGRP06401 933 aa14.01□□□□□ -0.17
TRIM28-207ENST00000597136 CAPN3P20807 821 aa14.01□□□□□ -0.17
TRIM28-207ENST00000597136 PRDX6P30041 224 aa14.01□□□□□ -0.17
TRIM28-207ENST00000597136 S100A3P33764 101 aa14.01□□□□□ -0.17
TRIM28-207ENST00000597136 KIR3DL1P43629 444 aa14.01□□□□□ -0.17
TRIM28-207ENST00000597136 HSD17B7P56937 341 aa14.01□□□□□ -0.17
TRIM28-207ENST00000597136 OR4D2P58180 307 aa14.01□□□□□ -0.17
TRIM28-207ENST00000597136 ACTN3Q08043 901 aaPredicted RBP14.01□□□□□ -0.17
TRIM28-207ENST00000597136 MAPRE2Q15555 327 aa14.01□□□□□ -0.17
TRIM28-207ENST00000597136 VPS26BQ4G0F5 336 aa14.01□□□□□ -0.17
TRIM28-207ENST00000597136 TIGD2Q4W5G0 525 aa14.01□□□□□ -0.17
TRIM28-207ENST00000597136 RP9Q8TA86 221 aaKnown RBP14.01□□□□□ -0.17
TRIM28-207ENST00000597136 DNAJB14Q8TBM8 379 aa14.01□□□□□ -0.17
TRIM28-207ENST00000597136 TANKQ92844 425 aa14.01□□□□□ -0.17
TRIM28-207ENST00000597136 FER1L6-AS2Q96M78 137 aa14.01□□□□□ -0.17
TRIM28-207ENST00000597136 ARHGAP9Q9BRR9 750 aa14.01□□□□□ -0.17
TRIM28-207ENST00000597136 SLC25A23Q9BV35 468 aa14.01□□□□□ -0.17
TRIM28-207ENST00000597136 ATP13A2Q9NQ11 1180 aa14.01□□□□□ -0.17
TRIM28-207ENST00000597136 ATAD3AQ9NVI7 634 aa14.01□□□□□ -0.17
TRIM28-207ENST00000597136 C5AR2Q9P296 337 aa14.01□□□□□ -0.17
TRIM28-207ENST00000597136 MRPS33Q9Y291 106 aaKnown RBP14.01□□□□□ -0.17
TRIM28-207ENST00000597136 MMACHCQ9Y4U1 282 aa14.01□□□□□ -0.17
TRIM28-207ENST00000597136 NBASA2RRP1 2371 aa14.01□□□□□ -0.17
TRIM28-207ENST00000597136 EXPH5Q8NEV8 1989 aa14.01□□□□□ -0.17
TRIM28-207ENST00000597136 NSG1A0A0A6YYJ2 146 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 A0A1W2PQ72 361 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 DYTNA2CJ06 578 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 ASPDHA6ND91 283 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 CCDC154A6NI56 674 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 CLDN4O14493 209 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 RRP9O43818 475 aaKnown RBP14□□□□□ -0.17
TRIM28-207ENST00000597136 CBX6O95503 412 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 HPP00738 406 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 MPEG1Q2M385 716 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 OR4F3Q6IEY1 312 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 OR52E8Q6IFG1 317 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 FDCSPQ8NFU4 85 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 DOK4Q8TEW6 326 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 EXOSC8Q96B26 276 aaKnown RBP14□□□□□ -0.17
TRIM28-207ENST00000597136 ABHD17AQ96GS6 310 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 OR52E6Q96RD3 313 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 DUSP26Q9BV47 211 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 ALOXE3Q9BYJ1 711 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 SEMA4CQ9C0C4 833 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 BHLHE41Q9C0J9 482 aaPredicted RBP14□□□□□ -0.17
TRIM28-207ENST00000597136 PNO1Q9NRX1 252 aaKnown RBP14□□□□□ -0.17
TRIM28-207ENST00000597136 TAGLN3Q9UI15 199 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 UTS2RQ9UKP6 389 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 PSME2Q9UL46 239 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 A0A1W2PP18 115 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 BLACEA4D250 179 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 ERVH48-1M5A8F1 160 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 CFLARO15519 480 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 CYC1P08574 325 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 T-ENOLP0DO92 83 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 DDX5P17844 614 aaKnown RBP14□□□□□ -0.17
TRIM28-207ENST00000597136 RRADP55042 308 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 WNT3P56703 355 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 FOLH1Q04609 750 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 STX5Q13190 355 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 TLR1Q15399 786 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 FAM180BQ6P0A1 224 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 PAPD4Q6PIY7 484 aaKnown RBP14□□□□□ -0.17
TRIM28-207ENST00000597136 DGAT2L6Q6ZPD8 337 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 GALNT16Q8N428 558 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 CIDECQ96AQ7 238 aaPredicted RBP14□□□□□ -0.17
TRIM28-207ENST00000597136 KLHL29Q96CT2 875 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 NSL1Q96IY1 281 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 NUDT9Q9BW91 350 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 SLC35C2Q9NQQ7 365 aa14□□□□□ -0.17
TRIM28-207ENST00000597136 RP1L1Q8IWN7 2480 aaPredicted RBP14□□□□□ -0.17
TRIM28-207ENST00000597136 FBP2O00757 339 aa13.99□□□□□ -0.17
TRIM28-207ENST00000597136 SCN2BO60939 215 aa13.99□□□□□ -0.17
TRIM28-207ENST00000597136 ERAL1O75616 437 aaKnown RBP13.99□□□□□ -0.17
TRIM28-207ENST00000597136 CEACAM4O75871 244 aa13.99□□□□□ -0.17
TRIM28-207ENST00000597136 PDGFAP04085 211 aa13.99□□□□□ -0.17
TRIM28-207ENST00000597136 STX4Q12846 297 aa13.99□□□□□ -0.17
TRIM28-207ENST00000597136 AIMP2Q13155 320 aaKnown RBP13.99□□□□□ -0.17
TRIM28-207ENST00000597136 ZNF750Q32MQ0 723 aa13.99□□□□□ -0.17
TRIM28-207ENST00000597136 MSANTD1Q6ZTZ1 278 aa13.99□□□□□ -0.17
TRIM28-207ENST00000597136 CLEC1AQ8NC01 280 aa13.99□□□□□ -0.17
TRIM28-207ENST00000597136 NFAM1Q8NET5 270 aaPredicted RBP13.99□□□□□ -0.17
TRIM28-207ENST00000597136 OR4K14Q8NGD5 310 aa13.99□□□□□ -0.17
TRIM28-207ENST00000597136 PPWD1Q96BP3 646 aaKnown RBP13.99□□□□□ -0.17
TRIM28-207ENST00000597136 CNRIP1Q96F85 164 aaPredicted RBP13.99□□□□□ -0.17
TRIM28-207ENST00000597136 THOC3Q96J01 351 aaKnown RBP13.99□□□□□ -0.17
TRIM28-207ENST00000597136 TUBB6Q9BUF5 446 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms