RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 LY6DQ14210 128 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 CEBPEQ15744 281 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 AGAP7PQ5VUJ5 663 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 H3F3CQ6NXT2 135 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 CCDC116Q8IYX3 515 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 LRRC25Q8N386 305 aaPredicted RBP17.99■□□□□ 0.47
PNKP-207ENST00000596014 SIRT6Q8N6T7 355 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 ZNF321PQ8N8H1 164 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 MTERF3Q96E29 417 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 ZNF764Q96H86 408 aaPredicted RBP17.99■□□□□ 0.47
PNKP-207ENST00000596014 AGAP4Q96P64 663 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 OR52B2Q96RD2 323 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 SMAD5Q99717 465 aaKnown RBP17.99■□□□□ 0.47
PNKP-207ENST00000596014 ENTPD4Q9Y227 616 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 CAPN7Q9Y6W3 813 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 GABRR3A8MPY1 467 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 A8MUI8 341 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 K7EM74 188 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 HRKO00198 91 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 TBX19O60806 448 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 CLCN2P51788 898 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 AQP5P55064 265 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 PDE7AQ13946 482 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 ZNF267Q14586 743 aaPredicted RBP17.99■□□□□ 0.47
PNKP-207ENST00000596014 NXNQ6DKJ4 435 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 ANKRD26P1Q6NSI1 321 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 TCTN3Q6NUS6 607 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 SPATA19Q7Z5L4 167 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 ZNF721Q8TF20 911 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 FBXL20Q96IG2 436 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 SMG1Q96Q15 3661 aaKnown RBP17.99■□□□□ 0.47
PNKP-207ENST00000596014 SEMA4CQ9C0C4 833 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 PTGFRNQ9P2B2 879 aa17.99■□□□□ 0.47
PNKP-207ENST00000596014 ZNF223Q9UK11 482 aaPredicted RBP17.99■□□□□ 0.47
PNKP-207ENST00000596014 TRBV11-1A0A0K0K1C0 115 aa17.98■□□□□ 0.47
PNKP-207ENST00000596014 MYO1GB0I1T2 1018 aa17.98■□□□□ 0.47
PNKP-207ENST00000596014 DCTN3O75935 186 aa17.98■□□□□ 0.47
PNKP-207ENST00000596014 DNAJC8O75937 253 aaPredicted RBP17.98■□□□□ 0.47
PNKP-207ENST00000596014 IGKV3-11P04433 115 aa17.98■□□□□ 0.47
PNKP-207ENST00000596014 ALDOCP09972 364 aaKnown RBP17.98■□□□□ 0.47
PNKP-207ENST00000596014 CT62P0C5K7 136 aa17.98■□□□□ 0.47
PNKP-207ENST00000596014 SFTPCP11686 197 aa17.98■□□□□ 0.47
PNKP-207ENST00000596014 PTGER1P34995 402 aa17.98■□□□□ 0.47
PNKP-207ENST00000596014 HPCAL1P37235 193 aa17.98■□□□□ 0.47
PNKP-207ENST00000596014 IDH3AP50213 366 aa17.98■□□□□ 0.47
PNKP-207ENST00000596014 CLDN8P56748 225 aa17.98■□□□□ 0.47
PNKP-207ENST00000596014 CRB2Q5IJ48 1285 aa17.98■□□□□ 0.47
PNKP-207ENST00000596014 R3HCC1LQ7Z5L2 792 aaKnown RBP17.98■□□□□ 0.47
PNKP-207ENST00000596014 GALNT12Q8IXK2 581 aa17.98■□□□□ 0.47
PNKP-207ENST00000596014 RIMKLAQ8IXN7 391 aa17.98■□□□□ 0.47
PNKP-207ENST00000596014 KRTCAP2Q8N6L1 136 aa17.98■□□□□ 0.47
PNKP-207ENST00000596014 CEP70Q8NHQ1 597 aa17.98■□□□□ 0.47
PNKP-207ENST00000596014 C9orf43Q8TAL5 461 aaPredicted RBP17.98■□□□□ 0.47
PNKP-207ENST00000596014 PPCDCQ96CD2 204 aa17.98■□□□□ 0.47
PNKP-207ENST00000596014 ART5Q96L15 291 aa17.98■□□□□ 0.47
PNKP-207ENST00000596014 BBS4Q96RK4 519 aa17.98■□□□□ 0.47
PNKP-207ENST00000596014 CNPPD1Q9BV87 410 aa17.98■□□□□ 0.47
PNKP-207ENST00000596014 DEFB126Q9BYW3 111 aa17.98■□□□□ 0.47
PNKP-207ENST00000596014 SH3BP4Q9P0V3 963 aa17.98■□□□□ 0.47
PNKP-207ENST00000596014 ATP6V1HQ9UI12 483 aa17.98■□□□□ 0.47
PNKP-207ENST00000596014 ERVK-19Q9WJR5 959 aa17.98■□□□□ 0.47
PNKP-207ENST00000596014 CPAMD8Q8IZJ3 1885 aa17.98■□□□□ 0.47
PNKP-207ENST00000596014 SCAMP2O15127 329 aaKnown RBP17.97■□□□□ 0.47
PNKP-207ENST00000596014 ATXN7O15265 892 aaPredicted RBP17.97■□□□□ 0.47
PNKP-207ENST00000596014 KALRNO60229 2985 aa17.97■□□□□ 0.47
PNKP-207ENST00000596014 PDGFAP04085 211 aa17.97■□□□□ 0.47
PNKP-207ENST00000596014 ALPPP05187 535 aa17.97■□□□□ 0.47
PNKP-207ENST00000596014 PRPS1L1P21108 318 aa17.97■□□□□ 0.47
PNKP-207ENST00000596014 MPIP34949 423 aa17.97■□□□□ 0.47
PNKP-207ENST00000596014 MGAT2Q10469 447 aa17.97■□□□□ 0.47
PNKP-207ENST00000596014 MAP4K2Q12851 820 aa17.97■□□□□ 0.47
PNKP-207ENST00000596014 PRICKLE4Q2TBC4 344 aa17.97■□□□□ 0.47
PNKP-207ENST00000596014 LSM12Q3MHD2 195 aaKnown RBP17.97■□□□□ 0.47
PNKP-207ENST00000596014 ZNF385BQ569K4 471 aa17.97■□□□□ 0.47
PNKP-207ENST00000596014 B3GNTL1Q67FW5 361 aaPredicted RBP17.97■□□□□ 0.47
PNKP-207ENST00000596014 ISLR2Q6UXK2 745 aa17.97■□□□□ 0.47
PNKP-207ENST00000596014 FITM2Q8N6M3 262 aa17.97■□□□□ 0.47
PNKP-207ENST00000596014 ADCY4Q8NFM4 1077 aa17.97■□□□□ 0.47
PNKP-207ENST00000596014 RFWD2Q8NHY2 731 aa17.97■□□□□ 0.47
PNKP-207ENST00000596014 SUN3Q8TAQ9 357 aa17.97■□□□□ 0.47
PNKP-207ENST00000596014 NUDT8Q8WV74 236 aa17.97■□□□□ 0.47
PNKP-207ENST00000596014 EBF4Q9BQW3 602 aa17.97■□□□□ 0.47
PNKP-207ENST00000596014 ZBTB20Q9HC78 741 aaPredicted RBP17.97■□□□□ 0.47
PNKP-207ENST00000596014 ZNF71Q9NQZ8 489 aaPredicted RBP17.97■□□□□ 0.47
PNKP-207ENST00000596014 COPS7AQ9UBW8 275 aa17.97■□□□□ 0.47
PNKP-207ENST00000596014 TP53TG5Q9Y2B4 290 aa17.97■□□□□ 0.47
PNKP-207ENST00000596014 PCDHGB7Q9Y5F8 929 aa17.97■□□□□ 0.47
PNKP-207ENST00000596014 SPTA1P02549 2419 aa17.97■□□□□ 0.47
PNKP-207ENST00000596014 SOX11P35716 441 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 RPL3P39023 403 aaKnown RBP17.96■□□□□ 0.47
PNKP-207ENST00000596014 C21orf58P58505 322 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 LTB4RQ15722 352 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 MPEG1Q2M385 716 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 ACAD11Q709F0 780 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 FAM9CQ8IZT9 166 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 SLC5A8Q8N695 610 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 LSM14AQ8ND56 463 aaKnown RBP17.96■□□□□ 0.47
PNKP-207ENST00000596014 OR7A2PQ8NGA2 310 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 BRINP2Q9C0B6 783 aa17.96■□□□□ 0.47
PNKP-207ENST00000596014 SLAMF7Q9NQ25 335 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms