RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 TCTN3Q6NUS6 607 aa18.58■□□□□ 0.57
CLIP3-206ENST00000593074 Q6ZS52 159 aa18.58■□□□□ 0.57
CLIP3-206ENST00000593074 TAGAPQ8N103 731 aa18.58■□□□□ 0.57
CLIP3-206ENST00000593074 AQP11Q8NBQ7 271 aa18.58■□□□□ 0.57
CLIP3-206ENST00000593074 TBC1D15Q8TC07 691 aa18.58■□□□□ 0.57
CLIP3-206ENST00000593074 MOAP1Q96BY2 351 aa18.58■□□□□ 0.57
CLIP3-206ENST00000593074 C6orf106Q9H6K1 298 aaPredicted RBP18.58■□□□□ 0.57
CLIP3-206ENST00000593074 NMNAT1Q9HAN9 279 aaPredicted RBP18.58■□□□□ 0.57
CLIP3-206ENST00000593074 ACOT13Q9NPJ3 140 aa18.58■□□□□ 0.57
CLIP3-206ENST00000593074 LYARQ9NX58 379 aaKnown RBP18.58■□□□□ 0.57
CLIP3-206ENST00000593074 RHCGQ9UBD6 479 aa18.58■□□□□ 0.57
CLIP3-206ENST00000593074 ACAD8Q9UKU7 415 aa18.58■□□□□ 0.57
CLIP3-206ENST00000593074 ENTPD4Q9Y227 616 aa18.58■□□□□ 0.57
CLIP3-206ENST00000593074 LRP4O75096 1905 aa18.58■□□□□ 0.56
CLIP3-206ENST00000593074 OR2A25A4D2G3 310 aa18.58■□□□□ 0.56
CLIP3-206ENST00000593074 PRAMEF26H0Y7S4 382 aa18.58■□□□□ 0.56
CLIP3-206ENST00000593074 GABARAPO95166 117 aa18.58■□□□□ 0.56
CLIP3-206ENST00000593074 GABRB1P18505 474 aa18.58■□□□□ 0.56
CLIP3-206ENST00000593074 CALRP27797 417 aaKnown RBP18.58■□□□□ 0.56
CLIP3-206ENST00000593074 ANXA11P50995 505 aaKnown RBP18.58■□□□□ 0.56
CLIP3-206ENST00000593074 DGKEP52429 567 aa18.58■□□□□ 0.56
CLIP3-206ENST00000593074 CTF1Q16619 201 aa18.58■□□□□ 0.56
CLIP3-206ENST00000593074 CCDC103Q8IW40 242 aa18.58■□□□□ 0.56
CLIP3-206ENST00000593074 DEPDC4Q8N2C3 294 aa18.58■□□□□ 0.56
CLIP3-206ENST00000593074 NT5CQ8TCD5 201 aa18.58■□□□□ 0.56
CLIP3-206ENST00000593074 MIPOL1Q8TD10 442 aa18.58■□□□□ 0.56
CLIP3-206ENST00000593074 XAGE5Q8WWM1 108 aa18.58■□□□□ 0.56
CLIP3-206ENST00000593074 BCL2L10Q9HD36 194 aa18.58■□□□□ 0.56
CLIP3-206ENST00000593074 TRPC4Q9UBN4 977 aa18.58■□□□□ 0.56
CLIP3-206ENST00000593074 CCDC88CQ9P219 2028 aa18.57■□□□□ 0.56
CLIP3-206ENST00000593074 TRBV4-1A0A0J9YWV2 114 aa18.57■□□□□ 0.56
CLIP3-206ENST00000593074 FADS2O95864 444 aaKnown RBP18.57■□□□□ 0.56
CLIP3-206ENST00000593074 IGLV3-19P01714 112 aa18.57■□□□□ 0.56
CLIP3-206ENST00000593074 FHP07954 510 aa18.57■□□□□ 0.56
CLIP3-206ENST00000593074 NR2F1P10589 423 aa18.57■□□□□ 0.56
CLIP3-206ENST00000593074 SRFP11831 508 aa18.57■□□□□ 0.56
CLIP3-206ENST00000593074 RABIFP47224 123 aa18.57■□□□□ 0.56
CLIP3-206ENST00000593074 CCR5P51681 352 aa18.57■□□□□ 0.56
CLIP3-206ENST00000593074 CRISP3P54108 245 aa18.57■□□□□ 0.56
CLIP3-206ENST00000593074 AQP6Q13520 282 aa18.57■□□□□ 0.56
CLIP3-206ENST00000593074 ZNF750Q32MQ0 723 aa18.57■□□□□ 0.56
CLIP3-206ENST00000593074 KIAA0895LQ68EN5 471 aa18.57■□□□□ 0.56
CLIP3-206ENST00000593074 KLHL17Q6TDP4 642 aa18.57■□□□□ 0.56
CLIP3-206ENST00000593074 AHSA2Q719I0 299 aa18.57■□□□□ 0.56
CLIP3-206ENST00000593074 KRT73Q86Y46 540 aa18.57■□□□□ 0.56
CLIP3-206ENST00000593074 OR56A1Q8NGH5 318 aa18.57■□□□□ 0.56
CLIP3-206ENST00000593074 OR4D11Q8NGI4 311 aa18.57■□□□□ 0.56
CLIP3-206ENST00000593074 BBS10Q8TAM1 723 aa18.57■□□□□ 0.56
CLIP3-206ENST00000593074 GTPBP3Q969Y2 492 aaKnown RBP18.57■□□□□ 0.56
CLIP3-206ENST00000593074 MAPKAP1Q9BPZ7 522 aa18.57■□□□□ 0.56
CLIP3-206ENST00000593074 SLC2A4RGQ9NR83 387 aa18.57■□□□□ 0.56
CLIP3-206ENST00000593074 FKBP14Q9NWM8 211 aa18.57■□□□□ 0.56
CLIP3-206ENST00000593074 ZNF226Q9NYT6 803 aa18.57■□□□□ 0.56
CLIP3-206ENST00000593074 FTSJ1Q9UET6 329 aa18.57■□□□□ 0.56
CLIP3-206ENST00000593074 PSORS1C1Q9UIG5 152 aa18.57■□□□□ 0.56
CLIP3-206ENST00000593074 BCAS1O75363 584 aaPredicted RBP18.56■□□□□ 0.56
CLIP3-206ENST00000593074 BCL10O95999 233 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 ADAP00813 363 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 TNFP01375 233 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 IGHV4-34P06331 123 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 CSNK2A2P19784 350 aaPredicted RBP18.56■□□□□ 0.56
CLIP3-206ENST00000593074 RGS1Q08116 209 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 FUT5Q11128 374 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 ILF3Q12906 894 aaKnown RBP eCLIP18.56■□□□□ 0.56
CLIP3-206ENST00000593074 BNIP3Q12983 259 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 ABI3BPQ7Z7G0 1075 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 ASPGQ86U10 573 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 NRROSQ86YC3 692 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 CCDC116Q8IYX3 515 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 DNAJC22Q8N4W6 341 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 KCT2Q8NC54 265 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 OR13H1Q8NG92 308 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 YIPF6Q96EC8 236 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 ZNF681Q96N22 645 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 FCRL4Q96PJ5 515 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 OR2A14Q96R47 310 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 UBE2ZQ9H832 354 aaPredicted RBP18.56■□□□□ 0.56
CLIP3-206ENST00000593074 CYP8B1Q9UNU6 501 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 DSPPQ9NZW4 1301 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 TNFSF14O43557 240 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 MAN1A2O60476 641 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 GASTP01350 101 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 HMGN2P05204 90 aaKnown RBP18.56■□□□□ 0.56
CLIP3-206ENST00000593074 POU2F1P14859 743 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 ELAVL4P26378 380 aaKnown RBP18.56■□□□□ 0.56
CLIP3-206ENST00000593074 IDH2P48735 452 aaKnown RBP18.56■□□□□ 0.56
CLIP3-206ENST00000593074 ENTPD1P49961 510 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 TDGQ13569 410 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 SPCS2Q15005 226 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 C11orf91Q3C1V1 193 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 PRRT3Q5FWE3 981 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 AP1ARQ63HQ0 302 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 TOE1Q96GM8 510 aaKnown RBP18.56■□□□□ 0.56
CLIP3-206ENST00000593074 BTBD2Q9BX70 525 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 PRO3102Q9H379 93 aa18.56■□□□□ 0.56
CLIP3-206ENST00000593074 TMEM265A0A087WTH1 108 aa18.55■□□□□ 0.56
CLIP3-206ENST00000593074 A0A1W2PS29 197 aa18.55■□□□□ 0.56
CLIP3-206ENST00000593074 OXSR1O95747 527 aaPredicted RBP18.55■□□□□ 0.56
CLIP3-206ENST00000593074 INHBBP09529 407 aa18.55■□□□□ 0.56
CLIP3-206ENST00000593074 ALPPL2P10696 532 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms