RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 FOLH1Q04609 750 aa9.66□□□□□ -0.86
SDF2-208ENST00000589788 CSTF3Q12996 717 aaKnown RBP9.66□□□□□ -0.86
SDF2-208ENST00000589788 BIKQ13323 160 aa9.66□□□□□ -0.86
SDF2-208ENST00000589788 TCHHL1Q5QJ38 904 aaPredicted RBP9.66□□□□□ -0.86
SDF2-208ENST00000589788 LIPMQ5VYY2 423 aa9.66□□□□□ -0.86
SDF2-208ENST00000589788 OR52E8Q6IFG1 317 aa9.66□□□□□ -0.86
SDF2-208ENST00000589788 MRM1Q6IN84 353 aaKnown RBP9.66□□□□□ -0.86
SDF2-208ENST00000589788 FRMD7Q6ZUT3 714 aa9.66□□□□□ -0.86
SDF2-208ENST00000589788 COMMD6Q7Z4G1 85 aa9.66□□□□□ -0.86
SDF2-208ENST00000589788 OR4N5Q8IXE1 308 aa9.66□□□□□ -0.86
SDF2-208ENST00000589788 LGI4Q8N135 537 aa9.66□□□□□ -0.86
SDF2-208ENST00000589788 MORN4Q8NDC4 146 aa9.66□□□□□ -0.86
SDF2-208ENST00000589788 AGAP11Q8TF27 550 aa9.66□□□□□ -0.86
SDF2-208ENST00000589788 GATAD2BQ8WXI9 593 aa9.66□□□□□ -0.86
SDF2-208ENST00000589788 NCLNQ969V3 563 aa9.66□□□□□ -0.86
SDF2-208ENST00000589788 ANKRD9Q96BM1 317 aaPredicted RBP9.66□□□□□ -0.86
SDF2-208ENST00000589788 SNRNP40Q96DI7 357 aaKnown RBP9.66□□□□□ -0.86
SDF2-208ENST00000589788 RBM18Q96H35 190 aaKnown RBP9.66□□□□□ -0.86
SDF2-208ENST00000589788 DGAT2Q96PD7 388 aa9.66□□□□□ -0.86
SDF2-208ENST00000589788 FAM111AQ96PZ2 611 aa9.66□□□□□ -0.86
SDF2-208ENST00000589788 UTP23Q9BRU9 249 aaKnown RBP9.66□□□□□ -0.86
SDF2-208ENST00000589788 OR8D2Q9GZM6 311 aa9.66□□□□□ -0.86
SDF2-208ENST00000589788 CDCP1Q9H5V8 836 aa9.66□□□□□ -0.86
SDF2-208ENST00000589788 AGPAT4Q9NRZ5 378 aa9.66□□□□□ -0.86
SDF2-208ENST00000589788 ASF1BQ9NVP2 202 aa9.66□□□□□ -0.86
SDF2-208ENST00000589788 SLC17A7Q9P2U7 560 aa9.66□□□□□ -0.86
SDF2-208ENST00000589788 VPS29Q9UBQ0 182 aa9.66□□□□□ -0.86
SDF2-208ENST00000589788 TIMM22Q9Y584 194 aa9.66□□□□□ -0.86
SDF2-208ENST00000589788 CLDN16Q9Y5I7 305 aa9.66□□□□□ -0.86
SDF2-208ENST00000589788 BAHCC1Q9P281 2608 aa9.66□□□□□ -0.86
SDF2-208ENST00000589788 GLOD5A6NK44 160 aa9.65□□□□□ -0.86
SDF2-208ENST00000589788 OR10H2O60403 315 aa9.65□□□□□ -0.86
SDF2-208ENST00000589788 PRAMEF2O60811 474 aa9.65□□□□□ -0.86
SDF2-208ENST00000589788 TRIM13O60858 407 aa9.65□□□□□ -0.86
SDF2-208ENST00000589788 GPR75O95800 540 aa9.65□□□□□ -0.86
SDF2-208ENST00000589788 AIFM1O95831 613 aa9.65□□□□□ -0.86
SDF2-208ENST00000589788 DHRS4L1P0CG22 281 aa9.65□□□□□ -0.86
SDF2-208ENST00000589788 CHN1P15882 459 aa9.65□□□□□ -0.86
SDF2-208ENST00000589788 ALOX15P16050 662 aaPredicted RBP9.65□□□□□ -0.86
SDF2-208ENST00000589788 PIK3R1P27986 724 aa9.65□□□□□ -0.86
SDF2-208ENST00000589788 TPP2P29144 1249 aaPredicted RBP9.65□□□□□ -0.86
SDF2-208ENST00000589788 IGLV3-21P80748 117 aaPredicted RBP9.65□□□□□ -0.86
SDF2-208ENST00000589788 PCLAFQ15004 111 aa9.65□□□□□ -0.86
SDF2-208ENST00000589788 FAM180AQ6UWF9 173 aa9.65□□□□□ -0.86
SDF2-208ENST00000589788 C10orf107Q8IVU9 208 aa9.65□□□□□ -0.86
SDF2-208ENST00000589788 C1orf52Q8N6N3 182 aaKnown RBP9.65□□□□□ -0.86
SDF2-208ENST00000589788 HORMAD2Q8N7B1 307 aa9.65□□□□□ -0.86
SDF2-208ENST00000589788 GBP7Q8N8V2 638 aaPredicted RBP9.65□□□□□ -0.86
SDF2-208ENST00000589788 ANKRD42Q8N9B4 389 aa9.65□□□□□ -0.86
SDF2-208ENST00000589788 APCDD1LQ8NCL9 501 aa9.65□□□□□ -0.86
SDF2-208ENST00000589788 THAP3Q8WTV1 239 aaPredicted RBP9.65□□□□□ -0.86
SDF2-208ENST00000589788 PTPMT1Q8WUK0 201 aaPredicted RBP9.65□□□□□ -0.86
SDF2-208ENST00000589788 ZNF775Q96BV0 537 aaPredicted RBP9.65□□□□□ -0.86
SDF2-208ENST00000589788 C19orf60Q96EN9 201 aa9.65□□□□□ -0.86
SDF2-208ENST00000589788 NPAS2Q99743 824 aa9.65□□□□□ -0.86
SDF2-208ENST00000589788 PELOQ9BRX2 385 aaKnown RBP9.65□□□□□ -0.86
SDF2-208ENST00000589788 TEX10Q9NXF1 929 aaPredicted RBP9.65□□□□□ -0.86
SDF2-208ENST00000589788 ANKRD10Q9NXR5 420 aa9.65□□□□□ -0.86
SDF2-208ENST00000589788 COPS7AQ9UBW8 275 aa9.65□□□□□ -0.86
SDF2-208ENST00000589788 PPIEQ9UNP9 301 aaKnown RBP9.65□□□□□ -0.86
SDF2-208ENST00000589788 SHANK1Q9Y566 2161 aa9.65□□□□□ -0.87
SDF2-208ENST00000589788 UBFD1O14562 309 aaKnown RBP9.64□□□□□ -0.87
SDF2-208ENST00000589788 ADAM11O75078 769 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 DEAF1O75398 565 aaPredicted RBP9.64□□□□□ -0.87
SDF2-208ENST00000589788 ZFAND5O76080 213 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 CD96P40200 585 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 STT3AP46977 705 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 HTR6P50406 440 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 MLF1P58340 268 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 ACSM2AQ08AH3 577 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 GALNT1Q10472 559 aaPredicted RBP9.64□□□□□ -0.87
SDF2-208ENST00000589788 TBL3Q12788 808 aaKnown RBP9.64□□□□□ -0.87
SDF2-208ENST00000589788 TUBA3CQ13748 450 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 OR1C1Q15619 314 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 INAQ16352 499 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 IMPG1Q17R60 797 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 ZNF766Q5HY98 468 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 SPDYAQ5MJ70 313 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 NDUFAF5Q5TEU4 345 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 HHATQ5VTY9 493 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 FAM219BQ5XKK7 198 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 ACSM2BQ68CK6 577 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 RPUSD3Q6P087 351 aaKnown RBP9.64□□□□□ -0.87
SDF2-208ENST00000589788 TUBA3EQ6PEY2 450 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 SCIMPQ6UWF3 145 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 HSDL2Q6YN16 418 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 ST13P4Q8IZP2 240 aaPredicted RBP9.64□□□□□ -0.87
SDF2-208ENST00000589788 TMEM156Q8N614 296 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 SLC2A12Q8TD20 617 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 GRHL3Q8TE85 626 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 PPWD1Q96BP3 646 aaKnown RBP9.64□□□□□ -0.87
SDF2-208ENST00000589788 ART5Q96L15 291 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 C5orf34Q96MH7 638 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 KCNA7Q96RP8 456 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 TRMOQ9BU70 441 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 FAIM2Q9BWQ8 316 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 ACPTQ9BZG2 426 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 SHCBP1LQ9BZQ2 653 aa9.64□□□□□ -0.87
SDF2-208ENST00000589788 INTS9Q9NV88 658 aaKnown RBP9.64□□□□□ -0.87
SDF2-208ENST00000589788 RP1L1Q8IWN7 2480 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms