RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 SPRR3Q9UBC9 169 aa17.29■□□□□ 0.36
TRIM47-205ENST00000587774 LRRC3CA6NJW4 275 aa17.28■□□□□ 0.36
TRIM47-205ENST00000587774 OR6C76A6NM76 312 aa17.28■□□□□ 0.36
TRIM47-205ENST00000587774 STX16-NPEPL1H3BU86 382 aa17.28■□□□□ 0.36
TRIM47-205ENST00000587774 STX16O14662 325 aa17.28■□□□□ 0.36
TRIM47-205ENST00000587774 URI1O94763 535 aaPredicted RBP17.28■□□□□ 0.36
TRIM47-205ENST00000587774 RFPL3SP0C7P2 107 aa17.28■□□□□ 0.36
TRIM47-205ENST00000587774 SLC35E2P0CK97 266 aa17.28■□□□□ 0.36
TRIM47-205ENST00000587774 MSX1P28360 303 aa17.28■□□□□ 0.36
TRIM47-205ENST00000587774 SSTR4P31391 388 aa17.28■□□□□ 0.36
TRIM47-205ENST00000587774 GALNSP34059 522 aa17.28■□□□□ 0.36
TRIM47-205ENST00000587774 SLC10A1Q14973 349 aa17.28■□□□□ 0.36
TRIM47-205ENST00000587774 RTL6Q6ICC9 239 aa17.28■□□□□ 0.36
TRIM47-205ENST00000587774 ATP6V1E2Q96A05 226 aa17.28■□□□□ 0.36
TRIM47-205ENST00000587774 TTYH2Q9BSA4 534 aa17.28■□□□□ 0.36
TRIM47-205ENST00000587774 NTMT1Q9BV86 223 aa17.28■□□□□ 0.36
TRIM47-205ENST00000587774 MRPL1Q9BYD6 325 aaKnown RBP17.28■□□□□ 0.36
TRIM47-205ENST00000587774 MCCC2Q9HCC0 563 aa17.28■□□□□ 0.36
TRIM47-205ENST00000587774 KCNJ16Q9NPI9 418 aa17.28■□□□□ 0.36
TRIM47-205ENST00000587774 DMGDHQ9UI17 866 aaKnown RBP17.28■□□□□ 0.36
TRIM47-205ENST00000587774 TMCO1Q9UM00 188 aa17.28■□□□□ 0.36
TRIM47-205ENST00000587774 BOKQ9UMX3 212 aaPredicted RBP17.28■□□□□ 0.36
TRIM47-205ENST00000587774 PCNX3Q9H6A9 2034 aa17.28■□□□□ 0.36
TRIM47-205ENST00000587774 TRGV5A0A0B4J1U4 118 aa17.27■□□□□ 0.36
TRIM47-205ENST00000587774 PGRMC2O15173 223 aa17.27■□□□□ 0.36
TRIM47-205ENST00000587774 HCN1O60741 890 aa17.27■□□□□ 0.36
TRIM47-205ENST00000587774 RBP1P09455 135 aa17.27■□□□□ 0.36
TRIM47-205ENST00000587774 GLI4P10075 376 aa17.27■□□□□ 0.36
TRIM47-205ENST00000587774 PIK3R1P27986 724 aa17.27■□□□□ 0.36
TRIM47-205ENST00000587774 SERPINB3P29508 390 aa17.27■□□□□ 0.36
TRIM47-205ENST00000587774 TBL3Q12788 808 aaKnown RBP17.27■□□□□ 0.36
TRIM47-205ENST00000587774 NTRK2Q16620 822 aa17.27■□□□□ 0.36
TRIM47-205ENST00000587774 WHAMMP3Q1A5X7 153 aa17.27■□□□□ 0.36
TRIM47-205ENST00000587774 FRG2Q64ET8 278 aa17.27■□□□□ 0.36
TRIM47-205ENST00000587774 B3GNT6Q6ZMB0 384 aa17.27■□□□□ 0.36
TRIM47-205ENST00000587774 RPS27LQ71UM5 84 aaKnown RBP17.27■□□□□ 0.36
TRIM47-205ENST00000587774 TAOK1Q7L7X3 1001 aa17.27■□□□□ 0.36
TRIM47-205ENST00000587774 LRRC25Q8N386 305 aaPredicted RBP17.27■□□□□ 0.36
TRIM47-205ENST00000587774 ZNF441Q8N8Z8 693 aa17.27■□□□□ 0.36
TRIM47-205ENST00000587774 NOA1Q8NC60 698 aaKnown RBP17.27■□□□□ 0.36
TRIM47-205ENST00000587774 SARAFQ96BY9 339 aa17.27■□□□□ 0.36
TRIM47-205ENST00000587774 FRG2BQ96QU4 278 aa17.27■□□□□ 0.36
TRIM47-205ENST00000587774 FMO2Q99518 471 aa17.27■□□□□ 0.36
TRIM47-205ENST00000587774 EXO5Q9H790 373 aa17.27■□□□□ 0.36
TRIM47-205ENST00000587774 CXorf21Q9HAI6 301 aa17.27■□□□□ 0.36
TRIM47-205ENST00000587774 ZFP64Q9NPA5 681 aa17.27■□□□□ 0.36
TRIM47-205ENST00000587774 CNIH4Q9P003 139 aa17.27■□□□□ 0.36
TRIM47-205ENST00000587774 ACAD8Q9UKU7 415 aa17.27■□□□□ 0.36
TRIM47-205ENST00000587774 CNOT11Q9UKZ1 510 aaKnown RBP17.27■□□□□ 0.36
TRIM47-205ENST00000587774 A0A0G2JNJ9 132 aa17.26■□□□□ 0.35
TRIM47-205ENST00000587774 A0A1B0GTL3 188 aa17.26■□□□□ 0.35
TRIM47-205ENST00000587774 C2orf92A0A1B0GVN3 265 aa17.26■□□□□ 0.35
TRIM47-205ENST00000587774 WDR1O75083 606 aa17.26■□□□□ 0.35
TRIM47-205ENST00000587774 SMIM24O75264 130 aa17.26■□□□□ 0.35
TRIM47-205ENST00000587774 RPS17P08708 135 aaKnown RBP17.26■□□□□ 0.35
TRIM47-205ENST00000587774 CT62P0C5K7 136 aa17.26■□□□□ 0.35
TRIM47-205ENST00000587774 ECHS1P30084 290 aa17.26■□□□□ 0.35
TRIM47-205ENST00000587774 SERPINB9P50453 376 aa17.26■□□□□ 0.35
TRIM47-205ENST00000587774 TSNAXIP1Q2TAA8 658 aa17.26■□□□□ 0.35
TRIM47-205ENST00000587774 GGTA1PQ4G0N0 100 aa17.26■□□□□ 0.35
TRIM47-205ENST00000587774 C1orf185Q5T7R7 199 aa17.26■□□□□ 0.35
TRIM47-205ENST00000587774 WLSQ5T9L3 541 aa17.26■□□□□ 0.35
TRIM47-205ENST00000587774 FAM219BQ5XKK7 198 aa17.26■□□□□ 0.35
TRIM47-205ENST00000587774 TTC19Q6DKK2 380 aaPredicted RBP17.26■□□□□ 0.35
TRIM47-205ENST00000587774 TMEM64Q6YI46 380 aa17.26■□□□□ 0.35
TRIM47-205ENST00000587774 CDH24Q86UP0 819 aa17.26■□□□□ 0.35
TRIM47-205ENST00000587774 GALNT12Q8IXK2 581 aa17.26■□□□□ 0.35
TRIM47-205ENST00000587774 OR4F6Q8NGB9 312 aa17.26■□□□□ 0.35
TRIM47-205ENST00000587774 OR10Q1Q8NGQ4 319 aa17.26■□□□□ 0.35
TRIM47-205ENST00000587774 JSRP1Q96MG2 331 aaPredicted RBP17.26■□□□□ 0.35
TRIM47-205ENST00000587774 DOHHQ9BU89 302 aa17.26■□□□□ 0.35
TRIM47-205ENST00000587774 SLC6A15Q9H2J7 730 aa17.26■□□□□ 0.35
TRIM47-205ENST00000587774 Q9UFV3 132 aa17.26■□□□□ 0.35
TRIM47-205ENST00000587774 ITGB1BP2Q9UKP3 347 aa17.26■□□□□ 0.35
TRIM47-205ENST00000587774 IKBKGQ9Y6K9 419 aa17.26■□□□□ 0.35
TRIM47-205ENST00000587774 C2CD3Q4AC94 2353 aa17.26■□□□□ 0.35
TRIM47-205ENST00000587774 ITPR3Q14573 2671 aa17.26■□□□□ 0.35
TRIM47-205ENST00000587774 POC1B-GALNT4F8VUJ3 575 aa17.25■□□□□ 0.35
TRIM47-205ENST00000587774 KLK1P06870 262 aa17.25■□□□□ 0.35
TRIM47-205ENST00000587774 ADH7P40394 386 aa17.25■□□□□ 0.35
TRIM47-205ENST00000587774 IFT88Q13099 833 aa17.25■□□□□ 0.35
TRIM47-205ENST00000587774 RPS6KA2Q15349 733 aa17.25■□□□□ 0.35
TRIM47-205ENST00000587774 C10orf62Q5T681 223 aaPredicted RBP17.25■□□□□ 0.35
TRIM47-205ENST00000587774 DMRTC2Q8IXT2 367 aaPredicted RBP17.25■□□□□ 0.35
TRIM47-205ENST00000587774 TAGAPQ8N103 731 aa17.25■□□□□ 0.35
TRIM47-205ENST00000587774 MMGT1Q8N4V1 131 aa17.25■□□□□ 0.35
TRIM47-205ENST00000587774 DCAKDQ8WVC6 231 aa17.25■□□□□ 0.35
TRIM47-205ENST00000587774 IFT81Q8WYA0 676 aa17.25■□□□□ 0.35
TRIM47-205ENST00000587774 ZNF597Q96LX8 424 aa17.25■□□□□ 0.35
TRIM47-205ENST00000587774 FARSBQ9NSD9 589 aaKnown RBP17.25■□□□□ 0.35
TRIM47-205ENST00000587774 RYDENQ9NUL5 291 aaKnown RBP17.25■□□□□ 0.35
TRIM47-205ENST00000587774 ZNF469Q96JG9 3925 aaPredicted RBP17.25■□□□□ 0.35
TRIM47-205ENST00000587774 FOXO6A8MYZ6 492 aa17.24■□□□□ 0.35
TRIM47-205ENST00000587774 TRIM49D1C9J1S8 452 aa17.24■□□□□ 0.35
TRIM47-205ENST00000587774 KRT38O76015 456 aa17.24■□□□□ 0.35
TRIM47-205ENST00000587774 COL6A2P12110 1019 aa17.24■□□□□ 0.35
TRIM47-205ENST00000587774 CAPN3P20807 821 aa17.24■□□□□ 0.35
TRIM47-205ENST00000587774 ZFP36L2P47974 494 aaKnown RBP17.24■□□□□ 0.35
TRIM47-205ENST00000587774 FBXW4P57775 412 aa17.24■□□□□ 0.35
TRIM47-205ENST00000587774 FUT7Q11130 342 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms