RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 SNUPNO95149 360 aaKnown RBP14.59□□□□□ -0.07
NCLN-203ENST00000587740 NADKO95544 446 aaPredicted RBP14.59□□□□□ -0.07
NCLN-203ENST00000587740 GBAP04062 536 aa14.59□□□□□ -0.07
NCLN-203ENST00000587740 KLK1P06870 262 aa14.59□□□□□ -0.07
NCLN-203ENST00000587740 CHN1P15882 459 aa14.59□□□□□ -0.07
NCLN-203ENST00000587740 ABOP16442 354 aa14.59□□□□□ -0.07
NCLN-203ENST00000587740 TLX1P31314 330 aaPredicted RBP14.59□□□□□ -0.07
NCLN-203ENST00000587740 SLC1A6P48664 564 aa14.59□□□□□ -0.07
NCLN-203ENST00000587740 ART1P52961 327 aa14.59□□□□□ -0.07
NCLN-203ENST00000587740 HMGCS1Q01581 520 aa14.59□□□□□ -0.07
NCLN-203ENST00000587740 RHAGQ02094 409 aa14.59□□□□□ -0.07
NCLN-203ENST00000587740 TBL3Q12788 808 aaKnown RBP14.59□□□□□ -0.07
NCLN-203ENST00000587740 STX3Q13277 289 aa14.59□□□□□ -0.07
NCLN-203ENST00000587740 NSDHLQ15738 373 aa14.59□□□□□ -0.07
NCLN-203ENST00000587740 CCNYL2Q5T2Q4 361 aa14.59□□□□□ -0.07
NCLN-203ENST00000587740 KANK2Q63ZY3 851 aa14.59□□□□□ -0.07
NCLN-203ENST00000587740 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.59□□□□□ -0.07
NCLN-203ENST00000587740 GPR180Q86V85 440 aa14.59□□□□□ -0.07
NCLN-203ENST00000587740 TRIM42Q8IWZ5 723 aa14.59□□□□□ -0.07
NCLN-203ENST00000587740 ZNF595Q8IYB9 648 aa14.59□□□□□ -0.07
NCLN-203ENST00000587740 FAM47BQ8NA70 645 aa14.59□□□□□ -0.07
NCLN-203ENST00000587740 AGR3Q8TD06 166 aa14.59□□□□□ -0.07
NCLN-203ENST00000587740 CA5BP1Q8WTZ4 195 aa14.59□□□□□ -0.07
NCLN-203ENST00000587740 VKORC1Q9BQB6 163 aa14.59□□□□□ -0.07
NCLN-203ENST00000587740 UTP23Q9BRU9 249 aaKnown RBP14.59□□□□□ -0.07
NCLN-203ENST00000587740 ACPTQ9BZG2 426 aa14.59□□□□□ -0.07
NCLN-203ENST00000587740 KCNK13Q9HB14 408 aa14.59□□□□□ -0.07
NCLN-203ENST00000587740 PRDM9Q9NQV7 894 aa14.59□□□□□ -0.07
NCLN-203ENST00000587740 NPDC1Q9NQX5 325 aaPredicted RBP14.59□□□□□ -0.07
NCLN-203ENST00000587740 PRTFDC1Q9NRG1 225 aa14.59□□□□□ -0.07
NCLN-203ENST00000587740 TNFRSF10DQ9UBN6 386 aa14.59□□□□□ -0.07
NCLN-203ENST00000587740 MMACHCQ9Y4U1 282 aa14.59□□□□□ -0.07
NCLN-203ENST00000587740 HRH3Q9Y5N1 445 aa14.59□□□□□ -0.07
NCLN-203ENST00000587740 DNHD1Q96M86 4753 aa14.59□□□□□ -0.07
NCLN-203ENST00000587740 SLC28A1O00337 649 aa14.58□□□□□ -0.08
NCLN-203ENST00000587740 CYR61O00622 381 aa14.58□□□□□ -0.08
NCLN-203ENST00000587740 ITM2AO43736 263 aa14.58□□□□□ -0.08
NCLN-203ENST00000587740 TMPRSS11DO60235 418 aa14.58□□□□□ -0.08
NCLN-203ENST00000587740 LYPLA1O75608 230 aaPredicted RBP14.58□□□□□ -0.08
NCLN-203ENST00000587740 FAM58BPP0C7Q3 252 aa14.58□□□□□ -0.08
NCLN-203ENST00000587740 ARRB2P32121 409 aa14.58□□□□□ -0.08
NCLN-203ENST00000587740 BUD31P41223 144 aaPredicted RBP14.58□□□□□ -0.08
NCLN-203ENST00000587740 HSD17B7P56937 341 aa14.58□□□□□ -0.08
NCLN-203ENST00000587740 BTG2P78543 158 aa14.58□□□□□ -0.08
NCLN-203ENST00000587740 BTKQ06187 659 aa14.58□□□□□ -0.08
NCLN-203ENST00000587740 ACSM2AQ08AH3 577 aa14.58□□□□□ -0.08
NCLN-203ENST00000587740 SLC13A2Q13183 592 aa14.58□□□□□ -0.08
NCLN-203ENST00000587740 MEP1AQ16819 746 aa14.58□□□□□ -0.08
NCLN-203ENST00000587740 SPIN4Q56A73 249 aa14.58□□□□□ -0.08
NCLN-203ENST00000587740 SPDYAQ5MJ70 313 aa14.58□□□□□ -0.08
NCLN-203ENST00000587740 ZNF468Q5VIY5 522 aaPredicted RBP14.58□□□□□ -0.08
NCLN-203ENST00000587740 ACSM2BQ68CK6 577 aa14.58□□□□□ -0.08
NCLN-203ENST00000587740 MRM1Q6IN84 353 aaKnown RBP14.58□□□□□ -0.08
NCLN-203ENST00000587740 RNF165Q6ZSG1 346 aa14.58□□□□□ -0.08
NCLN-203ENST00000587740 COMMD6Q7Z4G1 85 aa14.58□□□□□ -0.08
NCLN-203ENST00000587740 TRIM46Q7Z4K8 759 aa14.58□□□□□ -0.08
NCLN-203ENST00000587740 ANKRD37Q7Z713 158 aa14.58□□□□□ -0.08
NCLN-203ENST00000587740 GHDCQ8N2G8 530 aa14.58□□□□□ -0.08
NCLN-203ENST00000587740 MARVELD2Q8N4S9 558 aa14.58□□□□□ -0.08
NCLN-203ENST00000587740 C1orf52Q8N6N3 182 aaKnown RBP14.58□□□□□ -0.08
NCLN-203ENST00000587740 NRGNQ92686 78 aa14.58□□□□□ -0.08
NCLN-203ENST00000587740 CSF3RQ99062 836 aa14.58□□□□□ -0.08
NCLN-203ENST00000587740 ZDHHC2Q9UIJ5 367 aa14.58□□□□□ -0.08
NCLN-203ENST00000587740 DNAJC15Q9Y5T4 150 aa14.58□□□□□ -0.08
NCLN-203ENST00000587740 DNAJC13O75165 2243 aa14.57□□□□□ -0.08
NCLN-203ENST00000587740 TMEM233B4DJY2 109 aa14.57□□□□□ -0.08
NCLN-203ENST00000587740 RGS14O43566 566 aa14.57□□□□□ -0.08
NCLN-203ENST00000587740 SP1P08047 785 aa14.57□□□□□ -0.08
NCLN-203ENST00000587740 CD46P15529 392 aa14.57□□□□□ -0.08
NCLN-203ENST00000587740 MAOAP21397 527 aa14.57□□□□□ -0.08
NCLN-203ENST00000587740 TPP2P29144 1249 aaPredicted RBP14.57□□□□□ -0.08
NCLN-203ENST00000587740 HNRNPFP52597 415 aaKnown RBP14.57□□□□□ -0.08
NCLN-203ENST00000587740 HNRNPH2P55795 449 aaKnown RBP14.57□□□□□ -0.08
NCLN-203ENST00000587740 PPP2R2AP63151 447 aa14.57□□□□□ -0.08
NCLN-203ENST00000587740 TNFRSF17Q02223 184 aa14.57□□□□□ -0.08
NCLN-203ENST00000587740 ACTN3Q08043 901 aaPredicted RBP14.57□□□□□ -0.08
NCLN-203ENST00000587740 BST1Q10588 318 aa14.57□□□□□ -0.08
NCLN-203ENST00000587740 CES4AQ5XG92 561 aa14.57□□□□□ -0.08
NCLN-203ENST00000587740 ATG16L1Q676U5 607 aa14.57□□□□□ -0.08
NCLN-203ENST00000587740 SLC25A25Q6KCM7 469 aa14.57□□□□□ -0.08
NCLN-203ENST00000587740 DDIASQ8IXT1 998 aa14.57□□□□□ -0.08
NCLN-203ENST00000587740 KIRREL3Q8IZU9 778 aa14.57□□□□□ -0.08
NCLN-203ENST00000587740 MMP21Q8N119 569 aa14.57□□□□□ -0.08
NCLN-203ENST00000587740 TMEM178AQ8NBL3 297 aa14.57□□□□□ -0.08
NCLN-203ENST00000587740 TMEM52Q8NDY8 209 aa14.57□□□□□ -0.08
NCLN-203ENST00000587740 RAB3IL1Q8TBN0 382 aa14.57□□□□□ -0.08
NCLN-203ENST00000587740 M1APQ8TC57 530 aa14.57□□□□□ -0.08
NCLN-203ENST00000587740 TWIST2Q8WVJ9 160 aa14.57□□□□□ -0.08
NCLN-203ENST00000587740 TSLPQ969D9 159 aa14.57□□□□□ -0.08
NCLN-203ENST00000587740 APIPQ96GX9 242 aa14.57□□□□□ -0.08
NCLN-203ENST00000587740 RPF2Q9H7B2 306 aaKnown RBP14.57□□□□□ -0.08
NCLN-203ENST00000587740 MANSC1Q9H8J5 431 aa14.57□□□□□ -0.08
NCLN-203ENST00000587740 ZNF395Q9H8N7 513 aaPredicted RBP14.57□□□□□ -0.08
NCLN-203ENST00000587740 WDR41Q9HAD4 459 aa14.57□□□□□ -0.08
NCLN-203ENST00000587740 MMP25Q9NPA2 562 aa14.57□□□□□ -0.08
NCLN-203ENST00000587740 PFDN4Q9NQP4 134 aa14.57□□□□□ -0.08
NCLN-203ENST00000587740 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.57□□□□□ -0.08
NCLN-203ENST00000587740 RAP2CQ9Y3L5 183 aa14.57□□□□□ -0.08
NCLN-203ENST00000587740 ATG4BQ9Y4P1 393 aa14.57□□□□□ -0.08
NCLN-203ENST00000587740 ASB4Q9Y574 426 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms