RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 SLC22A7Q9Y694 548 aa9.58□□□□□ -0.88
APOC1-201ENST00000586638 USP9XQ93008 2570 aaPredicted RBP9.58□□□□□ -0.88
APOC1-201ENST00000586638 CCDC88CQ9P219 2028 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 TMEM150CB9EJG8 249 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 FAM227AF5H4B4 570 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 FOXS1O43638 330 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 TNFRSF21O75509 655 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 KRT75O95678 551 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 ARAFP10398 606 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 CDK4P11802 303 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 CSNK2A2P19784 350 aaPredicted RBP9.57□□□□□ -0.88
APOC1-201ENST00000586638 ITPKBP27987 946 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 CD1CP29017 333 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 MC3RP41968 323 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 GPR3P46089 330 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 ARL4DP49703 201 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 DSTNP60981 165 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 GPLD1P80108 840 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 MAT1AQ00266 395 aaKnown RBP9.57□□□□□ -0.88
APOC1-201ENST00000586638 FADDQ13158 208 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 MLC1Q15049 377 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 SFT2D3Q587I9 215 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 MANEAQ5SRI9 462 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 OGFRL1Q5TC84 451 aaPredicted RBP9.57□□□□□ -0.88
APOC1-201ENST00000586638 TMEM107Q6UX40 140 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 TMPRSS9Q7Z410 1059 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 PLXDC1Q8IUK5 500 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 OR4N5Q8IXE1 308 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 HORMAD2Q8N7B1 307 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 TTC29Q8NA56 475 aaPredicted RBP9.57□□□□□ -0.88
APOC1-201ENST00000586638 ICA1LQ8NDH6 482 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 OR10Q1Q8NGQ4 319 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 OR9A2Q8NGT5 310 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 NFKBIDQ8NI38 313 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 SFXN5Q8TD22 340 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 PPWD1Q96BP3 646 aaKnown RBP9.57□□□□□ -0.88
APOC1-201ENST00000586638 NEURL3Q96EH8 262 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 RNF31Q96EP0 1072 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 SLC47A1Q96FL8 570 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 OTUB1Q96FW1 271 aaPredicted RBP9.57□□□□□ -0.88
APOC1-201ENST00000586638 EFHD1Q9BUP0 239 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 SPATA9Q9BWV2 254 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 SPRTNQ9H040 489 aaPredicted RBP9.57□□□□□ -0.88
APOC1-201ENST00000586638 RAD21L1Q9H4I0 556 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 SERHL2Q9H4I8 314 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 GORASP2Q9H8Y8 452 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 ARMC1Q9NVT9 282 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 FAF1Q9UNN5 650 aaPredicted RBP9.57□□□□□ -0.88
APOC1-201ENST00000586638 DTNAQ9Y4J8 743 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 PCDHGA1Q9Y5H4 931 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 AK5Q9Y6K8 562 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 FER1L5A0AVI2 2057 aa9.57□□□□□ -0.88
APOC1-201ENST00000586638 AGRPO00253 132 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 TXNDC9O14530 226 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 RRP8O43159 456 aaKnown RBP9.56□□□□□ -0.88
APOC1-201ENST00000586638 FGF17O60258 216 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 SRPX2O60687 465 aaPredicted RBP9.56□□□□□ -0.88
APOC1-201ENST00000586638 LDB3O75112 727 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 PRKD3O94806 890 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 ZNF682O95780 498 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 OPN1SWP03999 348 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 PRB1P04280 392 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 RPLP0P05388 317 aaKnown RBP9.56□□□□□ -0.88
APOC1-201ENST00000586638 UMPSP11172 480 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 IL10P22301 178 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 AQP1P29972 269 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 EIF2S3P41091 472 aaKnown RBP9.56□□□□□ -0.88
APOC1-201ENST00000586638 CCT3P49368 545 aaKnown RBP9.56□□□□□ -0.88
APOC1-201ENST00000586638 CCL7P80098 99 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 SCARB2Q14108 478 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 NDUFA9Q16795 377 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 SYT16Q17RD7 645 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 RPS26P11Q5JNZ5 115 aaPredicted RBP9.56□□□□□ -0.88
APOC1-201ENST00000586638 CCDC116Q8IYX3 515 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 LRRC25Q8N386 305 aaPredicted RBP9.56□□□□□ -0.88
APOC1-201ENST00000586638 C11orf65Q8NCR3 313 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 LSM14AQ8ND56 463 aaKnown RBP9.56□□□□□ -0.88
APOC1-201ENST00000586638 PSMA8Q8TAA3 256 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 DOK4Q8TEW6 326 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 DNAJC9Q8WXX5 260 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 KAT2AQ92830 837 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 RAB8BQ92930 207 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 RNF145Q96MT1 663 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 ZNF681Q96N22 645 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 ASPSCR1Q9BZE9 553 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 CHRNA10Q9GZZ6 450 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 PRORYQ9H606 182 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 ANKRA2Q9H9E1 313 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 AGPAT4Q9NRZ5 378 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 ZCCHC3Q9NUD5 404 aaKnown RBP9.56□□□□□ -0.88
APOC1-201ENST00000586638 DCAF13Q9NV06 445 aaKnown RBP9.56□□□□□ -0.88
APOC1-201ENST00000586638 OLAHQ9NV23 265 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 CLCA2Q9UQC9 943 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 ZNF780BQ9Y6R6 833 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 SPACA6W5XKT8 324 aa9.56□□□□□ -0.88
APOC1-201ENST00000586638 URB1O60287 2271 aaKnown RBP9.56□□□□□ -0.88
APOC1-201ENST00000586638 TENM4Q6N022 2769 aa9.55□□□□□ -0.88
APOC1-201ENST00000586638 A0A1W2PQM1 296 aa9.55□□□□□ -0.88
APOC1-201ENST00000586638 HYKKA2RU49 373 aa9.55□□□□□ -0.88
APOC1-201ENST00000586638 SAC3D1A6NKF1 404 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms