RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 PCSK2P16519 638 aa11.56□□□□□ -0.56
ERCC2-207ENST00000586441 CCNG1P51959 295 aa11.56□□□□□ -0.56
ERCC2-207ENST00000586441 OLR1P78380 273 aa11.56□□□□□ -0.56
ERCC2-207ENST00000586441 BTG2P78543 158 aa11.56□□□□□ -0.56
ERCC2-207ENST00000586441 ZNF33BQ06732 778 aa11.56□□□□□ -0.56
ERCC2-207ENST00000586441 NR6A1Q15406 480 aa11.56□□□□□ -0.56
ERCC2-207ENST00000586441 SMU1Q2TAY7 513 aa11.56□□□□□ -0.56
ERCC2-207ENST00000586441 MMEL1Q495T6 779 aa11.56□□□□□ -0.56
ERCC2-207ENST00000586441 DEPDC1Q5TB30 811 aa11.56□□□□□ -0.56
ERCC2-207ENST00000586441 HACD2Q6Y1H2 254 aa11.56□□□□□ -0.56
ERCC2-207ENST00000586441 GOLGA7Q7Z5G4 137 aa11.56□□□□□ -0.56
ERCC2-207ENST00000586441 MYLK4Q86YV6 388 aaPredicted RBP11.56□□□□□ -0.56
ERCC2-207ENST00000586441 SHISA5Q8N114 240 aa11.56□□□□□ -0.56
ERCC2-207ENST00000586441 PCYOX1LQ8NBM8 494 aa11.56□□□□□ -0.56
ERCC2-207ENST00000586441 NFAM1Q8NET5 270 aaPredicted RBP11.56□□□□□ -0.56
ERCC2-207ENST00000586441 WDR60Q8WVS4 1066 aa11.56□□□□□ -0.56
ERCC2-207ENST00000586441 TSLPQ969D9 159 aa11.56□□□□□ -0.56
ERCC2-207ENST00000586441 RCN3Q96D15 328 aa11.56□□□□□ -0.56
ERCC2-207ENST00000586441 REPS1Q96D71 796 aa11.56□□□□□ -0.56
ERCC2-207ENST00000586441 MARK4Q96L34 752 aa11.56□□□□□ -0.56
ERCC2-207ENST00000586441 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.56□□□□□ -0.56
ERCC2-207ENST00000586441 NOL11Q9H8H0 719 aaKnown RBP11.56□□□□□ -0.56
ERCC2-207ENST00000586441 COPS7BQ9H9Q2 264 aaPredicted RBP11.56□□□□□ -0.56
ERCC2-207ENST00000586441 KCMF1Q9P0J7 381 aa11.56□□□□□ -0.56
ERCC2-207ENST00000586441 STX18Q9P2W9 335 aaKnown RBP11.56□□□□□ -0.56
ERCC2-207ENST00000586441 NTNG1Q9Y2I2 539 aa11.56□□□□□ -0.56
ERCC2-207ENST00000586441 ASB1Q9Y576 335 aa11.56□□□□□ -0.56
ERCC2-207ENST00000586441 FAM227AF5H4B4 570 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 FOXE1O00358 373 aaPredicted RBP11.55□□□□□ -0.56
ERCC2-207ENST00000586441 PPP6CO00743 305 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 OR4F21O95013 312 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 AGFG2O95081 481 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 RASAL1O95294 804 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 ANP32DO95626 131 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 LINC00032P0C843 101 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 MAOAP21397 527 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 GPX3P22352 226 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 PTX3P26022 381 aaPredicted RBP11.55□□□□□ -0.56
ERCC2-207ENST00000586441 HMOX2P30519 316 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 PLA2G16P53816 162 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 FOXA1P55317 472 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 LIM2P55344 173 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 PHEXP78562 749 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 SERTAD2Q14140 314 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.55□□□□□ -0.56
ERCC2-207ENST00000586441 EIF2S3LQ2VIR3 472 aaKnown RBP11.55□□□□□ -0.56
ERCC2-207ENST00000586441 AP5B1Q2VPB7 878 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 FBXO48Q5FWF7 155 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 XKR7Q5GH72 579 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 COQ5Q5HYK3 327 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 WLSQ5T9L3 541 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 KHDRBS2Q5VWX1 349 aaKnown RBP11.55□□□□□ -0.56
ERCC2-207ENST00000586441 MILR1Q7Z6M3 343 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 RPS19BP1Q86WX3 136 aaKnown RBP11.55□□□□□ -0.56
ERCC2-207ENST00000586441 L3MBTL4Q8NA19 623 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 MDS2Q8NDY4 140 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 B3GNT7Q8NFL0 401 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 PRR7Q8TB68 274 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 METTL6Q8TCB7 284 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 SSC4DQ8WTU2 575 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 CLPTM1LQ96KA5 538 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 C3orf30Q96M34 536 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 F2RL3Q96RI0 385 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 UTP23Q9BRU9 249 aaKnown RBP11.55□□□□□ -0.56
ERCC2-207ENST00000586441 CENPKQ9BS16 269 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 NTMT1Q9BV86 223 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 RBCK1Q9BYM8 510 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 IPPKQ9H8X2 491 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 WDR41Q9HAD4 459 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 NECTIN3Q9NQS3 549 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 PRTFDC1Q9NRG1 225 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 OLAHQ9NV23 265 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 PLA2G3Q9NZ20 509 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 TRPS1Q9UHF7 1281 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 NDUFAF1Q9Y375 327 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 CLDN16Q9Y5I7 305 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 SPACA6W5XKT8 324 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 SPTAN1Q13813 2472 aaKnown RBP11.55□□□□□ -0.56
ERCC2-207ENST00000586441 ICE1Q9Y2F5 2266 aa11.55□□□□□ -0.56
ERCC2-207ENST00000586441 ATP6AP2A0A1C7CYW4 349 aa11.54□□□□□ -0.56
ERCC2-207ENST00000586441 SLC28A1O00337 649 aa11.54□□□□□ -0.56
ERCC2-207ENST00000586441 OR7A17O14581 309 aa11.54□□□□□ -0.56
ERCC2-207ENST00000586441 ATP6AP2O75787 350 aa11.54□□□□□ -0.56
ERCC2-207ENST00000586441 GP1BBP13224 206 aa11.54□□□□□ -0.56
ERCC2-207ENST00000586441 HIST1H1TP22492 207 aaPredicted RBP11.54□□□□□ -0.56
ERCC2-207ENST00000586441 ATP5A1P25705 553 aaKnown RBP11.54□□□□□ -0.56
ERCC2-207ENST00000586441 TRHRP34981 398 aaPredicted RBP11.54□□□□□ -0.56
ERCC2-207ENST00000586441 CD96P40200 585 aa11.54□□□□□ -0.56
ERCC2-207ENST00000586441 ARL1P40616 181 aaPredicted RBP11.54□□□□□ -0.56
ERCC2-207ENST00000586441 CLCN2P51788 898 aa11.54□□□□□ -0.56
ERCC2-207ENST00000586441 GPR143P51810 404 aa11.54□□□□□ -0.56
ERCC2-207ENST00000586441 ERVK-8P63133 956 aa11.54□□□□□ -0.56
ERCC2-207ENST00000586441 SLC34A1Q06495 639 aa11.54□□□□□ -0.56
ERCC2-207ENST00000586441 MAD2L1Q13257 205 aaPredicted RBP11.54□□□□□ -0.56
ERCC2-207ENST00000586441 MRPL49Q13405 166 aaKnown RBP11.54□□□□□ -0.56
ERCC2-207ENST00000586441 TUBA3CQ13748 450 aa11.54□□□□□ -0.56
ERCC2-207ENST00000586441 RCN1Q15293 331 aa11.54□□□□□ -0.56
ERCC2-207ENST00000586441 PDCD4Q53EL6 469 aaKnown RBP11.54□□□□□ -0.56
ERCC2-207ENST00000586441 REP15Q6BDI9 236 aa11.54□□□□□ -0.56
ERCC2-207ENST00000586441 TUBA3EQ6PEY2 450 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms