RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 LRATO95237 230 aa13.25□□□□□ -0.29
SDF2-202ENST00000585428 S100BP04271 92 aaPredicted RBP13.25□□□□□ -0.29
SDF2-202ENST00000585428 SLC35E2BP0CK96 405 aa13.25□□□□□ -0.29
SDF2-202ENST00000585428 SLC35E2P0CK97 266 aa13.25□□□□□ -0.29
SDF2-202ENST00000585428 EPB42P16452 691 aa13.25□□□□□ -0.29
SDF2-202ENST00000585428 GDF1P27539 372 aa13.25□□□□□ -0.29
SDF2-202ENST00000585428 BSGP35613 385 aa13.25□□□□□ -0.29
SDF2-202ENST00000585428 GP5P40197 560 aa13.25□□□□□ -0.29
SDF2-202ENST00000585428 DGKQP52824 942 aa13.25□□□□□ -0.29
SDF2-202ENST00000585428 LIPJQ5W064 366 aa13.25□□□□□ -0.29
SDF2-202ENST00000585428 TMEM64Q6YI46 380 aa13.25□□□□□ -0.29
SDF2-202ENST00000585428 RNF111Q6ZNA4 994 aa13.25□□□□□ -0.29
SDF2-202ENST00000585428 PM20D2Q8IYS1 436 aa13.25□□□□□ -0.29
SDF2-202ENST00000585428 SPPL2AQ8TCT8 520 aa13.25□□□□□ -0.29
SDF2-202ENST00000585428 CDKL2Q92772 493 aa13.25□□□□□ -0.29
SDF2-202ENST00000585428 DIO2Q92813 273 aa13.25□□□□□ -0.29
SDF2-202ENST00000585428 ADIPOR1Q96A54 375 aa13.25□□□□□ -0.29
SDF2-202ENST00000585428 GAL3ST4Q96RP7 486 aa13.25□□□□□ -0.29
SDF2-202ENST00000585428 SECISBP2Q96T21 854 aaKnown RBP13.25□□□□□ -0.29
SDF2-202ENST00000585428 MTERF1Q99551 399 aaKnown RBP13.25□□□□□ -0.29
SDF2-202ENST00000585428 PLEKHF2Q9H8W4 249 aa13.25□□□□□ -0.29
SDF2-202ENST00000585428 NMRAL1Q9HBL8 299 aa13.25□□□□□ -0.29
SDF2-202ENST00000585428 NUDT4Q9NZJ9 180 aa13.25□□□□□ -0.29
SDF2-202ENST00000585428 TXNDC16Q9P2K2 825 aa13.25□□□□□ -0.29
SDF2-202ENST00000585428 OPTCQ9UBM4 332 aa13.25□□□□□ -0.29
SDF2-202ENST00000585428 MTRF1LQ9UGC7 380 aaKnown RBP13.25□□□□□ -0.29
SDF2-202ENST00000585428 PCDHGA11Q9Y5H2 935 aa13.25□□□□□ -0.29
SDF2-202ENST00000585428 NPFFR2Q9Y5X5 522 aa13.25□□□□□ -0.29
SDF2-202ENST00000585428 A0A0A6YYD5 115 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 C15orf38-AP3S2A0A0A6YYH1 394 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 TUBAL3A6NHL2 446 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 CD8B2A6NJW9 211 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 GLOD5A6NK44 160 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 H0YIV9 168 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 CCDC188H7C350 402 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 UBXN8O00124 270 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 TP53I11O14683 189 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 PGRMC2O15173 223 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 TRAPPC6AO75865 159 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 ATE1O95260 518 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 FAM58BPP0C7Q3 252 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 BMP7P18075 431 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 HOXC12P31275 282 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 SPRP35270 261 aaPredicted RBP13.24□□□□□ -0.29
SDF2-202ENST00000585428 BUD31P41223 144 aaPredicted RBP13.24□□□□□ -0.29
SDF2-202ENST00000585428 CASP3P42574 277 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 CDK9P50750 372 aaKnown RBP13.24□□□□□ -0.29
SDF2-202ENST00000585428 RAP1GDS1P52306 607 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 FBXW4P57775 412 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 GPX6P59796 221 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 FUT7Q11130 342 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 CUL3Q13618 768 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 SF3B4Q15427 424 aaKnown RBP eCLIP13.24□□□□□ -0.29
SDF2-202ENST00000585428 GRTP1Q5TC63 336 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 BICRALQ6AI39 1079 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 KIF18BQ86Y91 864 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 TAGAPQ8N103 731 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 ZNF615Q8N8J6 731 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 WDYHV1Q96HA8 205 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 RILPQ96NA2 401 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 CENPKQ9BS16 269 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 CALHM2Q9HA72 323 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 CXorf21Q9HAI6 301 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 FETUBQ9UGM5 382 aa13.24□□□□□ -0.29
SDF2-202ENST00000585428 HRNRQ86YZ3 2850 aaPredicted RBP13.23□□□□□ -0.29
SDF2-202ENST00000585428 A0A1W2PS29 197 aa13.23□□□□□ -0.29
SDF2-202ENST00000585428 MBD3L4A6NDZ8 208 aaPredicted RBP13.23□□□□□ -0.29
SDF2-202ENST00000585428 MBD3L3A6NE82 208 aaPredicted RBP13.23□□□□□ -0.29
SDF2-202ENST00000585428 MBD3L5A6NJ08 208 aaPredicted RBP13.23□□□□□ -0.29
SDF2-202ENST00000585428 CAPN14A8MX76 684 aa13.23□□□□□ -0.29
SDF2-202ENST00000585428 EIF3HO15372 352 aaKnown RBP eCLIP13.23□□□□□ -0.29
SDF2-202ENST00000585428 OR10H2O60403 315 aa13.23□□□□□ -0.29
SDF2-202ENST00000585428 KERAO60938 352 aa13.23□□□□□ -0.29
SDF2-202ENST00000585428 IL18BPO95998 194 aa13.23□□□□□ -0.29
SDF2-202ENST00000585428 RAF1P04049 648 aa13.23□□□□□ -0.29
SDF2-202ENST00000585428 LTA4HP09960 611 aaKnown RBP13.23□□□□□ -0.29
SDF2-202ENST00000585428 TACR1P25103 407 aa13.23□□□□□ -0.29
SDF2-202ENST00000585428 CTSSP25774 331 aa13.23□□□□□ -0.29
SDF2-202ENST00000585428 SSTR4P31391 388 aa13.23□□□□□ -0.29
SDF2-202ENST00000585428 RPS13P62277 151 aaKnown RBP13.23□□□□□ -0.29
SDF2-202ENST00000585428 DDX39BQ13838 428 aaKnown RBP13.23□□□□□ -0.29
SDF2-202ENST00000585428 RPS6KA2Q15349 733 aa13.23□□□□□ -0.29
SDF2-202ENST00000585428 DEFB113Q30KQ7 82 aa13.23□□□□□ -0.29
SDF2-202ENST00000585428 PAMR1Q6UXH9 720 aa13.23□□□□□ -0.29
SDF2-202ENST00000585428 PACS2Q86VP3 889 aa13.23□□□□□ -0.29
SDF2-202ENST00000585428 TEX9Q8N6V9 391 aa13.23□□□□□ -0.29
SDF2-202ENST00000585428 MBD3L2Q8NHZ7 208 aaPredicted RBP13.23□□□□□ -0.29
SDF2-202ENST00000585428 LINC01560Q8TB33 94 aa13.23□□□□□ -0.29
SDF2-202ENST00000585428 EXT2Q93063 718 aa13.23□□□□□ -0.29
SDF2-202ENST00000585428 NXNL1Q96CM4 212 aa13.23□□□□□ -0.29
SDF2-202ENST00000585428 ZNF597Q96LX8 424 aa13.23□□□□□ -0.29
SDF2-202ENST00000585428 SAYSD1Q9NPB0 183 aa13.23□□□□□ -0.29
SDF2-202ENST00000585428 SNX15Q9NRS6 342 aa13.23□□□□□ -0.29
SDF2-202ENST00000585428 LYARQ9NX58 379 aaKnown RBP13.23□□□□□ -0.29
SDF2-202ENST00000585428 SLC6A5Q9Y345 797 aa13.23□□□□□ -0.29
SDF2-202ENST00000585428 SAR1BQ9Y6B6 198 aa13.23□□□□□ -0.29
SDF2-202ENST00000585428 SUPT3HB4E1H0 165 aa13.22□□□□□ -0.29
SDF2-202ENST00000585428 FOXE1O00358 373 aaPredicted RBP13.22□□□□□ -0.29
SDF2-202ENST00000585428 UGDHO60701 494 aa13.22□□□□□ -0.29
SDF2-202ENST00000585428 SUPT3HO75486 399 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms