RNA–Protein interactions for RNA: ENST00000584952.1

AC055811.3-201, humanhuman

BASIC

Gene AC055811.3, Length 686 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.3-201ENST00000584952 SLMAPQ14BN4 828 aa12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 EBPQ15125 230 aaKnown RBP12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 NTRK2Q16620 822 aa12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 KBTBD12Q3ZCT8 623 aa12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 TBCELQ5QJ74 424 aa12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 LIPJQ5W064 366 aa12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 CMC1Q7Z7K0 106 aa12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 TBC1D1Q86TI0 1168 aaPredicted RBP12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 TGIF2LYQ8IUE0 185 aa12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 TEX9Q8N6V9 391 aa12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 LRRN4CLQ8ND94 238 aa12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 FBF1Q8TES7 1133 aa12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 FMO2Q99518 471 aa12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 GPATCH1Q9BRR8 931 aaKnown RBP12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 ZNF717Q9BY31 904 aaPredicted RBP12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 DDX31Q9H8H2 851 aaKnown RBP12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 ASB4Q9Y574 426 aa12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 PCDHGA11Q9Y5H2 935 aa12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 NIPBLQ6KC79 2804 aaeCLIP12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 C15orf38-AP3S2A0A0A6YYH1 394 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 C2orf92A0A1B0GVN3 265 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 OR6C76A6NM76 312 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 H0YIV9 168 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 DVL2O14641 736 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 TMPRSS11DO60235 418 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 EEDO75530 441 aaKnown RBP12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 EPPINO95925 133 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 FAM58BPP0C7Q3 252 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 SLC35E2P0CK97 266 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 NR2F6P10588 404 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 MTHFD2P13995 350 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 BMP5P22003 454 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 GDF1P27539 372 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 STX2P32856 288 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 GALNSP34059 522 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 RPS13P62277 151 aaKnown RBP12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 CUL3Q13618 768 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 TMEM198Q66K66 360 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 MRM1Q6IN84 353 aaKnown RBP12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 TMEM64Q6YI46 380 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 RELL1Q8IUW5 271 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 TAGAPQ8N103 731 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 PPM1NQ8N819 430 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 RELL2Q8NC24 303 aaPredicted RBP12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 NAXEQ8NCW5 288 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 TNIP2Q8NFZ5 429 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 DIO2Q92813 273 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 UCN3Q969E3 161 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 TP53INP1Q96A56 240 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 NXNL1Q96CM4 212 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 RMND5BQ96G75 393 aaPredicted RBP12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 TIMP4Q99727 224 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 SH3GL2Q99962 352 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 TSPYL1Q9H0U9 437 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 ACTR8Q9H981 624 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 LYARQ9NX58 379 aaKnown RBP12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 NINJ2Q9NZG7 142 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 EDARQ9UNE0 448 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 ACOT9Q9Y305 439 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 ANGPTL3Q9Y5C1 460 aa12.31□□□□□ -0.44
AC055811.3-201ENST00000584952 A0A0A6YYD5 115 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 A6NNC1 897 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 SYCE1LA8MT33 242 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 TP53I11O14683 189 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 TRAPPC6AO75865 159 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 SNX4O95219 450 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 RHOXF2BP0C7M4 288 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 KLK2P20151 261 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 CEACAM8P31997 349 aaPredicted RBP12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 BSGP35613 385 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 TIMP3P35625 211 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 ASCL1P50553 236 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 WNT3P56703 355 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 PPP2R2AP63151 447 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 CRYZQ08257 329 aaKnown RBP12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 SETDB1Q15047 1291 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 CEBPEQ15744 281 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 CPSF6Q16630 551 aaKnown RBP eCLIP12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 PFKFB4Q16877 469 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 FBXL19-AS1Q494R0 122 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 ACSF3Q4G176 576 aaPredicted RBP12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 CYP20A1Q6UW02 462 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 CDC20BQ86Y33 519 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 IFT20Q8IY31 132 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 ZNF441Q8N8Z8 693 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 RHEBL1Q8TAI7 183 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 FAM222BQ8WU58 562 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 RNASE6Q93091 150 aaKnown RBP12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 REPS1Q96D71 796 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 LRRC46Q96FV0 321 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 ZNF597Q96LX8 424 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 RHOXF2Q9BQY4 288 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 CDC42EP4Q9H3Q1 356 aaKnown RBP12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 WDR41Q9HAD4 459 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 PSD3Q9NYI0 1048 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 ZNF629Q9UEG4 869 aaPredicted RBP12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 NPFFR2Q9Y5X5 522 aa12.3□□□□□ -0.44
AC055811.3-201ENST00000584952 PRRC2AP48634 2157 aaKnown RBP12.29□□□□□ -0.44
AC055811.3-201ENST00000584952 CCDC189A1A4V9 331 aa12.29□□□□□ -0.44
AC055811.3-201ENST00000584952 CAPN14A8MX76 684 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms