RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 RNF175Q8N4F7 328 aa8.03□□□□□ -1.12
CDK5RAP3-229ENST00000583697 SLC15A4Q8N697 577 aa8.03□□□□□ -1.12
CDK5RAP3-229ENST00000583697 RHEBL1Q8TAI7 183 aa8.03□□□□□ -1.12
CDK5RAP3-229ENST00000583697 PAQR8Q8TEZ7 354 aa8.03□□□□□ -1.12
CDK5RAP3-229ENST00000583697 RIT1Q92963 219 aa8.03□□□□□ -1.12
CDK5RAP3-229ENST00000583697 PPWD1Q96BP3 646 aaKnown RBP8.03□□□□□ -1.12
CDK5RAP3-229ENST00000583697 NXNL1Q96CM4 212 aa8.03□□□□□ -1.12
CDK5RAP3-229ENST00000583697 MTBPQ96DY7 904 aa8.03□□□□□ -1.12
CDK5RAP3-229ENST00000583697 LRRC46Q96FV0 321 aa8.03□□□□□ -1.12
CDK5RAP3-229ENST00000583697 SENP5Q96HI0 755 aaPredicted RBP8.03□□□□□ -1.12
CDK5RAP3-229ENST00000583697 DOHHQ9BU89 302 aa8.03□□□□□ -1.12
CDK5RAP3-229ENST00000583697 WWTR1Q9GZV5 400 aa8.03□□□□□ -1.12
CDK5RAP3-229ENST00000583697 EPB41L4BQ9H329 900 aa8.03□□□□□ -1.12
CDK5RAP3-229ENST00000583697 ACBD3Q9H3P7 528 aa8.03□□□□□ -1.12
CDK5RAP3-229ENST00000583697 CENPHQ9H3R5 247 aa8.03□□□□□ -1.12
CDK5RAP3-229ENST00000583697 ZFP64Q9NPA5 681 aa8.03□□□□□ -1.12
CDK5RAP3-229ENST00000583697 SNX15Q9NRS6 342 aa8.03□□□□□ -1.12
CDK5RAP3-229ENST00000583697 IGSF5Q9NSI5 407 aa8.03□□□□□ -1.12
CDK5RAP3-229ENST00000583697 ALKBH4Q9NXW9 302 aa8.03□□□□□ -1.12
CDK5RAP3-229ENST00000583697 CNIH4Q9P003 139 aa8.03□□□□□ -1.12
CDK5RAP3-229ENST00000583697 PSMC3IPQ9P2W1 217 aaPredicted RBP8.03□□□□□ -1.12
CDK5RAP3-229ENST00000583697 SPRR3Q9UBC9 169 aa8.03□□□□□ -1.12
CDK5RAP3-229ENST00000583697 TBK1Q9UHD2 729 aa8.03□□□□□ -1.12
CDK5RAP3-229ENST00000583697 ZNF180Q9UJW8 692 aa8.03□□□□□ -1.12
CDK5RAP3-229ENST00000583697 FAM215AQ9Y5M1 114 aa8.03□□□□□ -1.12
CDK5RAP3-229ENST00000583697 OTOGQ6ZRI0 2925 aa8.03□□□□□ -1.12
CDK5RAP3-229ENST00000583697 NOTCH2Q04721 2471 aa8.03□□□□□ -1.12
CDK5RAP3-229ENST00000583697 APCP25054 2843 aa8.02□□□□□ -1.12
CDK5RAP3-229ENST00000583697 A0A096LPK6 155 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 C15orf38-AP3S2A0A0A6YYH1 394 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 A0A0G2JNJ9 132 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 CCDC189A1A4V9 331 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 GLOD5A6NK44 160 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 TRIM49D1C9J1S8 452 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 H0YIV9 168 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 HRKO00198 91 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 CDH16O75309 829 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 NADKO95544 446 aaPredicted RBP8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 AIFM1O95831 613 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 HOXD4P09016 255 aaPredicted RBP8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 FBXO45P0C2W1 286 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 MYZAPP0CAP1 466 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 GLI4P10075 376 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 CD1EP15812 388 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 KRT15P19012 456 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 ENDOUP21128 410 aaKnown RBP8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 PTX3P26022 381 aaPredicted RBP8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 PEX19P40855 299 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 MASP1P48740 699 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 ALDH18A1P54886 795 aaKnown RBP8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 NRG3P56975 720 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 RPP38P78345 283 aaKnown RBP8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 PCDH1Q08174 1060 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 FOXO1Q12778 655 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 CUL3Q13618 768 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 GTF2H2Q13888 395 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 ZNF267Q14586 743 aaPredicted RBP8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 CPSF6Q16630 551 aaKnown RBP eCLIP8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 PFKFB4Q16877 469 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 ZNF791Q3KP31 576 aaPredicted RBP8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 SLC25A35Q3KQZ1 300 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 PIGGQ5H8A4 983 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 RIPPLY2Q5TAB7 128 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 HLA-DQA1Q5Y7H0 255 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 GTF2H2CQ6P1K8 395 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 SPNS3Q6ZMD2 512 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 GOLGA7Q7Z5G4 137 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 GALNT12Q8IXK2 581 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 CENPLQ8N0S6 344 aaPredicted RBP8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 GOLGA6L1Q8N7Z2 621 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 OR10G3Q8NGC4 313 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 DCAKDQ8WVC6 231 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 DIO2Q92813 273 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 ATP6V1E2Q96A05 226 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 ZIM3Q96PE6 472 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 TMEM109Q9BVC6 243 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 SLC6A15Q9H2J7 730 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 IPPKQ9H8X2 491 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 SEMA4BQ9NPR2 832 aaPredicted RBP8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 QPCTLQ9NXS2 382 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 CPSF2Q9P2I0 782 aaKnown RBP8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 Q9UFV3 132 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 TSC22D4Q9Y3Q8 395 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 TNPO3Q9Y5L0 923 aaKnown RBP8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 GTF3C1Q12789 2109 aa8.02□□□□□ -1.13
CDK5RAP3-229ENST00000583697 CREBBPQ92793 2442 aa8.01□□□□□ -1.13
CDK5RAP3-229ENST00000583697 ARHGAP21Q5T5U3 1957 aa8.01□□□□□ -1.13
CDK5RAP3-229ENST00000583697 EML6Q6ZMW3 1958 aa8.01□□□□□ -1.13
CDK5RAP3-229ENST00000583697 PDZD2O15018 2839 aa8.01□□□□□ -1.13
CDK5RAP3-229ENST00000583697 ADGRG4Q8IZF6 3080 aa8.01□□□□□ -1.13
CDK5RAP3-229ENST00000583697 CENPEQ02224 2701 aa8.01□□□□□ -1.13
CDK5RAP3-229ENST00000583697 A0A0A6YYD5 115 aa8.01□□□□□ -1.13
CDK5RAP3-229ENST00000583697 C2orf92A0A1B0GVN3 265 aa8.01□□□□□ -1.13
CDK5RAP3-229ENST00000583697 LRRC3CA6NJW4 275 aa8.01□□□□□ -1.13
CDK5RAP3-229ENST00000583697 DVL2O14641 736 aa8.01□□□□□ -1.13
CDK5RAP3-229ENST00000583697 TP53I11O14683 189 aa8.01□□□□□ -1.13
CDK5RAP3-229ENST00000583697 RGS16O15492 202 aaPredicted RBP8.01□□□□□ -1.13
CDK5RAP3-229ENST00000583697 PROM1O43490 865 aa8.01□□□□□ -1.13
CDK5RAP3-229ENST00000583697 EEDO75530 441 aaKnown RBP8.01□□□□□ -1.13
CDK5RAP3-229ENST00000583697 SEMA3DO95025 777 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms