RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	ADRA2C	P18825	462 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	PSMA2	P25787	234 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	CTNNA2	P26232	953 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	CALR	P27797	417 aa	Known RBP	2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	GDI1	P31150	447 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	HOXA6	P31267	233 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	OPRD1	P41143	372 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	TNFRSF4	P43489	277 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	DVL1P1	P54792	670 aa	Predicted RBP	2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	NAGLU	P54802	743 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	CDH4	P55283	916 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	YBEY	P58557	167 aa	Predicted RBP	2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	TUBB4B	P68371	445 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	CDK3	Q00526	305 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	OGDH	Q02218	1023 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	SLC25A11	Q02978	314 aa	Known RBP	2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	RUNX1T1	Q06455	604 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	SULT2A1	Q06520	285 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	ZNF33A	Q06730	810 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	ACSM1	Q08AH1	577 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	PNRC1	Q12796	327 aa	Predicted RBP	2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	UBE2V1	Q13404	147 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	ENPP2	Q13822	863 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	NR1D2	Q14995	579 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	PDK2	Q15119	407 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	MLF2	Q15773	248 aa	Predicted RBP	2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	TAZ	Q16635	292 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	MEP1B	Q16820	701 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	HADH	Q16836	314 aa	Known RBP	2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	RABGAP1L	Q5R372	815 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	C6orf136	Q5SQH8	315 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	CCNYL2	Q5T2Q4	361 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	OR7E24	Q6IFN5	339 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	FIGLA	Q6QHK4	219 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	LRRC31	Q6UY01	552 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	RAD9B	Q6WBX8	426 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	ZNF852	Q6ZMS4	543 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	PLEKHM3	Q6ZWE6	761 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	MARK2	Q7KZI7	788 aa	Known RBP	2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	PIWIL3	Q7Z3Z3	882 aa	Known RBP	2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	SPATA19	Q7Z5L4	167 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	SETD3	Q86TU7	594 aa	Predicted RBP	2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	LRRC49	Q8IUZ0	686 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	MAP7D3	Q8IWC1	876 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	BBS7	Q8IWZ6	715 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	CTAGE4	Q8IX94	777 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	SYCE1	Q8N0S2	351 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	UMODL1-AS1	Q8N2C9	162 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	CIART	Q8N365	385 aa	Predicted RBP	2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	EMC1	Q8N766	993 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	PAPD5	Q8NDF8	572 aa	Known RBP	2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	OCC1	Q8TAD7	63 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	SETD6	Q8TBK2	473 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	FAM172A	Q8WUF8	416 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	TMEM255B	Q8WV15	326 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	NDRG1	Q92597	394 aa	Known RBP	2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	NXNL1	Q96CM4	212 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	FAF2	Q96CS3	445 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	TMA16	Q96EY4	203 aa	Known RBP	2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	PRICKLE1	Q96MT3	831 aa	Predicted RBP	2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	ZNF583	Q96ND8	569 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	XPO6	Q96QU8	1125 aa	Known RBP	2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	OR6C1	Q96RD1	312 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	SMC6	Q96SB8	1091 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	ZNF670	Q9BS34	389 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	RPP25	Q9BUL9	199 aa	Known RBP	2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	THUMPD3	Q9BV44	507 aa	Known RBP	2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	PLA2G2F	Q9BZM2	168 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	CHMP1A	Q9HD42	196 aa	Predicted RBP	2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	GKN1	Q9NS71	199 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	DEC1	Q9P2X7	70 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	ANAPC7	Q9UJX3	599 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	NEU3	Q9UQ49	428 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	POMT1	Q9Y6A1	747 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	BDP1	A6H8Y1	2624 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	DENND4A	Q7Z401	1863 aa		2.92	□□□□□ -1.94
MSI2-215	ENST00000582453	PLXNA3	P51805	1871 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453		A0A1W2PPQ1	181 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	OR2M5	A3KFT3	312 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453		A4D1N5	150 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	OR5K3	A6NET4	321 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	PRR23A	A6NEV1	266 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	ANKUB1	A6NFN9	424 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	TMCO5B	A8MYB1	307 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453		E9PAM4	449 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	FAM72C	H0Y354	149 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453		H0YAE9	185 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	SSX4	O60224	188 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	SLC22A3	O75751	556 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	GRAP2	O75791	330 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	GOSR1	O95249	250 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	SLU7	O95391	586 aa	Known RBP	2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	IGHV4-39	P01824	125 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	CISD3	P0C7P0	127 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	AOC1	P19801	751 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	TCEA1	P23193	301 aa	Known RBP	2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	MIP	P30301	263 aa		2.91	□□□□□ -1.94
MSI2-215	ENST00000582453	PCGF2	P35227	344 aa		2.91	□□□□□ -1.94

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms