RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	CD274	Q9NZQ7	290 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FLRT3	Q9NZU0	649 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CRIM1	Q9NZV1	1036 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	RNF14	Q9UBS8	474 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PCTP	Q9UKL6	214 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CBLC	Q9ULV8	474 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SLC6A5	Q9Y345	797 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CLCA3P	Q9Y6N3	262 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	JMJD1C	Q15652	2540 aa		4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ANK3	Q12955	4377 aa	Known RBP	4.07	□□□□□ -1.76
PPP4R1-209	ENST00000578329		A0A096LPK6	155 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TRGV5	A0A0B4J1U4	118 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ANKRD33B	A6NCL7	494 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	URAD	A6NGE7	173 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SUPT3H	B4E1H0	165 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329		H0YC42	278 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FOXE1	O00358	373 aa	Predicted RBP	4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SYT5	O00445	386 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	UBFD1	O14562	309 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CLGN	O14967	610 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ZSCAN12	O43309	604 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ZIC3	O60481	467 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	HCN1	O60741	890 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	DIAPH2	O60879	1101 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	UGT2B11	O75310	529 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	H2AFY	O75367	372 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SUPT3H	O75486	399 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	KLHL2	O95198	593 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ACSL3	O95573	720 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	EPPIN	O95925	133 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	HPN	P05981	417 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	UQCRH	P07919	91 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	RPS17	P08708	135 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SLC35E2	P0CK97	266 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CT45A8	P0DMV1	189 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CT45A9	P0DMV2	189 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PCNA	P12004	261 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ALOX15	P16050	662 aa	Predicted RBP	4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	BMP7	P18075	431 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CAPN3	P20807	821 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GALNS	P34059	522 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	OPRM1	P35372	400 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CASP3	P42574	277 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SSR2	P43308	183 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CDK9	P50750	372 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	AGFG1	P52594	562 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ALDH18A1	P54886	795 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TPD52	P55327	224 aa	Predicted RBP	4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GFRA1	P56159	465 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ADAM8	P78325	824 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	STX4	Q12846	297 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FOXD4	Q12950	439 aa	Predicted RBP	4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CUL3	Q13618	768 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	DDX39B	Q13838	428 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GTF2H2	Q13888	395 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SERTAD2	Q14140	314 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SLC10A1	Q14973	349 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	NNAT	Q16517	81 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CPSF6	Q16630	551 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PRICKLE4	Q2TBC4	344 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	KRTAP21-3	Q3LHN1	58 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TRMT12	Q53H54	448 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	UNC50	Q53HI1	259 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CT45A2	Q5DJT8	189 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	NHSL2	Q5HYW2	709 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	C1orf185	Q5T7R7	199 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	RIPPLY2	Q5TAB7	128 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	NDUFAF5	Q5TEU4	345 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	LIPJ	Q5W064	366 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SLC22A10	Q63ZE4	541 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	GTF2H2C	Q6P1K8	395 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	OPN5	Q6U736	354 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	B3GNT6	Q6ZMB0	384 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FAM47E	Q6ZV65	393 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CXorf67	Q86X51	503 aa	Predicted RBP	4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CDC20B	Q86Y33	519 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	RELL1	Q8IUW5	271 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ZZZ3	Q8IYH5	903 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ST13P4	Q8IZP2	240 aa	Predicted RBP	4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	METTL4	Q8N3J2	472 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FAM98A	Q8NCA5	519 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ARMC2	Q8NEN0	867 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	OR4N2	Q8NGD1	307 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	OR5M3	Q8NGP4	307 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	STAG3L4	Q8TBR4	150 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ZNF483	Q8TF39	744 aa	Predicted RBP	4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	ASB5	Q8WWX0	329 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	IGFBPL1	Q8WX77	278 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	RND1	Q92730	232 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	TANK	Q92844	425 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	DAZL	Q92904	295 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	RGMA	Q96B86	450 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	MRRF	Q96E11	262 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	CMTM7	Q96FZ5	175 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	FAR2	Q96K12	515 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	SGCZ	Q96LD1	299 aa		4.06	□□□□□ -1.76
PPP4R1-209	ENST00000578329	HBEGF	Q99075	208 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms