RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 MTHFD2P13995 350 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 BPIP17213 487 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 ARSIQ5FYB1 569 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 RAB41Q5JT25 222 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 ANKRD34AQ69YU3 496 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 GDF6Q6KF10 455 aaPredicted RBP12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 ZCCHC10Q8TBK6 192 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 TCEAL4Q96EI5 215 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 IFT46Q9NQC8 304 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 NDOR1Q9UHB4 597 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 NUBP2Q9Y5Y2 271 aa12.52□□□□□ -0.41
PCDHGB3-201ENST00000576222 TARM1B6A8C7 271 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 MUSKO15146 869 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 FMO6PO60774 539 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 RBBP9O75884 186 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 C8orf89P0DMQ9 161 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 FSHRP23945 695 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 IL32P24001 234 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 TACR1P25103 407 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 FAM129CQ86XR2 697 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 SMPDL3AQ92484 453 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 KCNN1Q92952 543 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 PPP1R14AQ96A00 147 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 FYTTD1Q96QD9 318 aaKnown RBP12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 INIPQ9NRY2 104 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 TAF1P21675 1872 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 ZNF91Q05481 1191 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 PIN1Q13526 163 aaPredicted RBP12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 TXNDC8Q6A555 127 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 EIF5AL1Q6IS14 154 aaKnown RBP12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 WASH2PQ6VEQ5 465 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 RBM23Q86U06 439 aaKnown RBP12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 MRPS33Q9Y291 106 aaKnown RBP12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 WDR45Q9Y484 360 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 BCORQ6W2J9 1755 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 GLOD5A6NK44 160 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 TSPAN6O43657 245 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 ADH1AP07327 375 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 NUDT7P0C024 238 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 TRAPPC2P0DI81 140 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 TRAPPC2BP0DI82 140 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 SSTR2P30874 369 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 MLLT3P42568 568 aaPredicted RBP12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 ZNF33BQ06732 778 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 UGT3A2Q3SY77 523 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 TMEM69Q5SWH9 247 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 COMMD6Q7Z4G1 85 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 PARGQ86W56 976 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 TFGQ92734 400 aaPredicted RBP12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 PLAC1Q9HBJ0 212 aa12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 MRPS30Q9NP92 439 aaKnown RBP12.51□□□□□ -0.41
PCDHGB3-201ENST00000576222 GPR37L1O60883 481 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 PDGFAP04085 211 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 RAB3BP20337 219 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 VAMP1P23763 118 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 RPL35P42766 123 aaKnown RBP12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 RRAS2P62070 204 aaPredicted RBP12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 SLC44A3Q8N4M1 653 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 RNASE11Q8TAA1 199 aaKnown RBP12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 TRMT10AQ8TBZ6 339 aaKnown RBP12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 DOK1Q99704 481 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 RDH14Q9HBH5 336 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 PRODHO43272 600 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 LRRTM2O43300 516 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 KRT33AO76009 404 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 C1QAP02745 245 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 PCCBP05166 539 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 ALPPL2P10696 532 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 JUNDP17535 347 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 CHMP24386 653 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 APEX1P27695 318 aaKnown RBP12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 TGFBR1P36897 503 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 MAP3K8P41279 467 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 WDR5P61964 334 aaKnown RBP12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 GRB14Q14449 540 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 ZMYND11Q15326 602 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 XKR7Q5GH72 579 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 CATSPEREQ5SY80 951 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 C22orf39Q6P5X5 142 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 POMZP3Q6PJE2 187 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 ARSKQ6UWY0 536 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 CREB3L2Q70SY1 520 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 NPAS4Q8IUM7 802 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 MS4A15Q8N5U1 240 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 OR52E4Q8NGH9 312 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 NPLOC4Q8TAT6 608 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 ADAD1Q96M93 576 aaKnown RBP12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 KCNK12Q9HB15 430 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 IL26Q9NPH9 171 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 GLTPQ9NZD2 209 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 KLHL21Q9UJP4 597 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 PRRC2BQ5JSZ5 2229 aaKnown RBP12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 GABRR3A8MPY1 467 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 E7EQ34 232 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 EIF3FO00303 357 aaPredicted RBP12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 OR7A17O14581 309 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 GPR39O43194 453 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 RASGRP1O95267 797 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 TFP02787 698 aa12.5□□□□□ -0.41
PCDHGB3-201ENST00000576222 STATHP02808 62 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms