RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 NCF1CA8MVU1 366 aaPredicted RBP9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 CAPN14A8MX76 684 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 A8MXE2 369 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 SIAH2O43255 324 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 CTIFO43310 598 aaKnown RBP9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 STK16O75716 305 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 ACTL6AO96019 429 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 TGFB1P01137 390 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 NCF1P14598 390 aaPredicted RBP9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 ALOX15P16050 662 aaPredicted RBP9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 GALNSP34059 522 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 PPP2R2BQ00005 443 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 RCAN2Q14206 197 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 FRG1Q14331 258 aaKnown RBP9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 ZNF267Q14586 743 aaPredicted RBP9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 RPS6KA2Q15349 733 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 ACKR1Q16570 336 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 PDK4Q16654 411 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 HIST2H2ACQ16777 129 aaPredicted RBP9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 FBXO48Q5FWF7 155 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 PAGE2BQ5JRK9 111 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 CDKL4Q5MAI5 379 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 WIPI1Q5MNZ9 446 aaPredicted RBP9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 DEPDC1Q5TB30 811 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 STEAP4Q687X5 459 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 C18orf63Q68DL7 685 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 HIST2H2AA3Q6FI13 130 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 OR4C11Q6IEV9 310 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 TMEM64Q6YI46 380 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 RNF111Q6ZNA4 994 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 FRA10AC1Q70Z53 315 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 YTHDF3Q7Z739 585 aaKnown RBP9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 GPR180Q86V85 440 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 LAS2Q8IYD9 372 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 TAGAPQ8N103 731 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 TCAIMQ8N3R3 496 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 RIT1Q92963 219 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 ESAMQ96AP7 390 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 VPS39Q96JC1 886 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 ZFP3Q96NJ6 502 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 TUBA1CQ9BQE3 449 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 MCMBPQ9BTE3 642 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 PHACTR1Q9C0D0 580 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 DERL2Q9GZP9 239 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 CNOT10Q9H9A5 744 aaKnown RBP9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 LZTFL1Q9NQ48 299 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 WWOXQ9NZC7 414 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 NDRG3Q9UGV2 375 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 TRPS1Q9UHF7 1281 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 PTBP2Q9UKA9 531 aaKnown RBP9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 TESMINQ9Y4I5 508 aa9.09□□□□□ -0.95
CALCOCO2-227ENST00000575560 NBEAL1Q6ZS30 2694 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 C2orf92A0A1B0GVN3 265 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 FAM95CA0A1B0GW59 222 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 DEFB108AA8MXU0 73 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 SAP18O00422 153 aaKnown RBP9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 DNALI1O14645 258 aaPredicted RBP9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 PRKRAO75569 313 aaKnown RBP9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 WISP3O95389 354 aaPredicted RBP9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 GPR75O95800 540 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 CYP4B1P13584 511 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 IVDP26440 423 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 PTPN6P29350 595 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 ELK3P41970 407 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 SSR2P43308 183 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 HSPA7P48741 367 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 FNTAP49354 379 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 PCYT1AP49585 367 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 TNFRSF17Q02223 184 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 PCDH1Q08174 1060 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 CHIT1Q13231 466 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 TOMM20Q15388 145 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 HP1BP3Q5SSJ5 553 aaPredicted RBP9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 KHDRBS2Q5VWX1 349 aaKnown RBP9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 TIGD3Q6B0B8 471 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 GPSM1Q86YR5 675 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 SPC24Q8NBT2 197 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 FAM83FQ8NEG4 500 aaPredicted RBP9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 OR7G3Q8NG95 312 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 PPP1R14CQ8TAE6 165 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 GRK7Q8WTQ7 553 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 WNT2BQ93097 391 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 ADIPOR1Q96A54 375 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 TMEM41AQ96HV5 264 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 WFIKKN1Q96NZ8 548 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 KRT12Q99456 494 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 TM9SF2Q99805 663 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 PELOQ9BRX2 385 aaKnown RBP9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 G6PC3Q9BUM1 346 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 SORBS1Q9BX66 1292 aaKnown RBP9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 PIGMQ9H3S5 423 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 POPDC3Q9HBV1 291 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 SNX15Q9NRS6 342 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 TEX10Q9NXF1 929 aaPredicted RBP9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 C6orf203Q9P0P8 240 aaPredicted RBP9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 TEX264Q9Y6I9 313 aa9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 ANK3Q12955 4377 aaKnown RBP9.08□□□□□ -0.96
CALCOCO2-227ENST00000575560 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.07□□□□□ -0.96
CALCOCO2-227ENST00000575560 SH3BGRLO75368 114 aa9.07□□□□□ -0.96
CALCOCO2-227ENST00000575560 CRLF1O75462 422 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms