RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 SEMA3DO95025 777 aa19.45■□□□□ 0.7
CHRNB1-206ENST00000574054 KLK1P06870 262 aa19.45■□□□□ 0.7
CHRNB1-206ENST00000574054 RFPL3SP0C7P2 107 aa19.45■□□□□ 0.7
CHRNB1-206ENST00000574054 GLI4P10075 376 aa19.45■□□□□ 0.7
CHRNB1-206ENST00000574054 IGFBP2P18065 325 aa19.45■□□□□ 0.7
CHRNB1-206ENST00000574054 POU3F2P20265 443 aaPredicted RBP19.45■□□□□ 0.7
CHRNB1-206ENST00000574054 CAPN3P20807 821 aa19.45■□□□□ 0.7
CHRNB1-206ENST00000574054 MSX1P28360 303 aa19.45■□□□□ 0.7
CHRNB1-206ENST00000574054 SSTR4P31391 388 aa19.45■□□□□ 0.7
CHRNB1-206ENST00000574054 TFF3Q07654 80 aa19.45■□□□□ 0.7
CHRNB1-206ENST00000574054 SGO1Q5FBB7 561 aa19.45■□□□□ 0.7
CHRNB1-206ENST00000574054 HLA-DQA1Q5Y7H0 255 aa19.45■□□□□ 0.7
CHRNB1-206ENST00000574054 TMEM64Q6YI46 380 aa19.45■□□□□ 0.7
CHRNB1-206ENST00000574054 CDH24Q86UP0 819 aa19.45■□□□□ 0.7
CHRNB1-206ENST00000574054 TAGAPQ8N103 731 aa19.45■□□□□ 0.7
CHRNB1-206ENST00000574054 IFT81Q8WYA0 676 aa19.45■□□□□ 0.7
CHRNB1-206ENST00000574054 PAFAH2Q99487 392 aa19.45■□□□□ 0.7
CHRNB1-206ENST00000574054 DOHHQ9BU89 302 aa19.45■□□□□ 0.7
CHRNB1-206ENST00000574054 ZNF703Q9H7S9 590 aaPredicted RBP19.45■□□□□ 0.7
CHRNB1-206ENST00000574054 TEX10Q9NXF1 929 aaPredicted RBP19.45■□□□□ 0.7
CHRNB1-206ENST00000574054 SPRR3Q9UBC9 169 aa19.45■□□□□ 0.7
CHRNB1-206ENST00000574054 FAM215AQ9Y5M1 114 aa19.45■□□□□ 0.7
CHRNB1-206ENST00000574054 CHCHD2Q9Y6H1 151 aaPredicted RBP19.45■□□□□ 0.7
CHRNB1-206ENST00000574054 SPG11Q96JI7 2443 aa19.44■□□□□ 0.7
CHRNB1-206ENST00000574054 C2orf92A0A1B0GVN3 265 aa19.44■□□□□ 0.7
CHRNB1-206ENST00000574054 LRRC3CA6NJW4 275 aa19.44■□□□□ 0.7
CHRNB1-206ENST00000574054 FOXO6A8MYZ6 492 aa19.44■□□□□ 0.7
CHRNB1-206ENST00000574054 CLPSP04118 112 aa19.44■□□□□ 0.7
CHRNB1-206ENST00000574054 GALNSP34059 522 aa19.44■□□□□ 0.7
CHRNB1-206ENST00000574054 SERPINB9P50453 376 aa19.44■□□□□ 0.7
CHRNB1-206ENST00000574054 TRAF3Q13114 568 aa19.44■□□□□ 0.7
CHRNB1-206ENST00000574054 WHAMMP3Q1A5X7 153 aa19.44■□□□□ 0.7
CHRNB1-206ENST00000574054 TSNAXIP1Q2TAA8 658 aa19.44■□□□□ 0.7
CHRNB1-206ENST00000574054 C6orf163Q5TEZ5 329 aa19.44■□□□□ 0.7
CHRNB1-206ENST00000574054 RTL6Q6ICC9 239 aa19.44■□□□□ 0.7
CHRNB1-206ENST00000574054 GALNT12Q8IXK2 581 aa19.44■□□□□ 0.7
CHRNB1-206ENST00000574054 LIX1Q8N485 282 aa19.44■□□□□ 0.7
CHRNB1-206ENST00000574054 UHMK1Q8TAS1 419 aaKnown RBP19.44■□□□□ 0.7
CHRNB1-206ENST00000574054 MRPL1Q9BYD6 325 aaKnown RBP19.44■□□□□ 0.7
CHRNB1-206ENST00000574054 SLC6A15Q9H2J7 730 aa19.44■□□□□ 0.7
CHRNB1-206ENST00000574054 CXorf21Q9HAI6 301 aa19.44■□□□□ 0.7
CHRNB1-206ENST00000574054 PROK2Q9HC23 129 aa19.44■□□□□ 0.7
CHRNB1-206ENST00000574054 AHSPQ9NZD4 102 aa19.44■□□□□ 0.7
CHRNB1-206ENST00000574054 B4GALT7Q9UBV7 327 aa19.44■□□□□ 0.7
CHRNB1-206ENST00000574054 CNOT11Q9UKZ1 510 aaKnown RBP19.44■□□□□ 0.7
CHRNB1-206ENST00000574054 POC1B-GALNT4F8VUJ3 575 aa19.43■□□□□ 0.7
CHRNB1-206ENST00000574054 STX16-NPEPL1H3BU86 382 aa19.43■□□□□ 0.7
CHRNB1-206ENST00000574054 STX16O14662 325 aa19.43■□□□□ 0.7
CHRNB1-206ENST00000574054 WDR1O75083 606 aa19.43■□□□□ 0.7
CHRNB1-206ENST00000574054 KRT38O76015 456 aa19.43■□□□□ 0.7
CHRNB1-206ENST00000574054 ENDOUP21128 410 aaKnown RBP19.43■□□□□ 0.7
CHRNB1-206ENST00000574054 MAGEA12P43365 314 aa19.43■□□□□ 0.7
CHRNB1-206ENST00000574054 TRPC1P48995 793 aa19.43■□□□□ 0.7
CHRNB1-206ENST00000574054 NTRK2Q16620 822 aa19.43■□□□□ 0.7
CHRNB1-206ENST00000574054 CCNYL2Q5T2Q4 361 aa19.43■□□□□ 0.7
CHRNB1-206ENST00000574054 C1orf185Q5T7R7 199 aa19.43■□□□□ 0.7
CHRNB1-206ENST00000574054 RPS27LQ71UM5 84 aaKnown RBP19.43■□□□□ 0.7
CHRNB1-206ENST00000574054 PAGE2Q7Z2X7 111 aa19.43■□□□□ 0.7
CHRNB1-206ENST00000574054 MILR1Q7Z6M3 343 aa19.43■□□□□ 0.7
CHRNB1-206ENST00000574054 RELL1Q8IUW5 271 aa19.43■□□□□ 0.7
CHRNB1-206ENST00000574054 OR4K14Q8NGD5 310 aa19.43■□□□□ 0.7
CHRNB1-206ENST00000574054 DIO2Q92813 273 aa19.43■□□□□ 0.7
CHRNB1-206ENST00000574054 ISL2Q96A47 359 aa19.43■□□□□ 0.7
CHRNB1-206ENST00000574054 FMO2Q99518 471 aa19.43■□□□□ 0.7
CHRNB1-206ENST00000574054 NTMT1Q9BV86 223 aa19.43■□□□□ 0.7
CHRNB1-206ENST00000574054 FUT8Q9BYC5 575 aa19.43■□□□□ 0.7
CHRNB1-206ENST00000574054 TSPYL1Q9H0U9 437 aa19.43■□□□□ 0.7
CHRNB1-206ENST00000574054 ELOVL6Q9H5J4 265 aa19.43■□□□□ 0.7
CHRNB1-206ENST00000574054 ZBTB26Q9HCK0 441 aa19.43■□□□□ 0.7
CHRNB1-206ENST00000574054 DMGDHQ9UI17 866 aaKnown RBP19.43■□□□□ 0.7
CHRNB1-206ENST00000574054 A0A0G2JNJ9 132 aa19.42■□□□□ 0.7
CHRNB1-206ENST00000574054 CAPN14A8MX76 684 aa19.42■□□□□ 0.7
CHRNB1-206ENST00000574054 TP53I11O14683 189 aa19.42■□□□□ 0.7
CHRNB1-206ENST00000574054 CT62P0C5K7 136 aa19.42■□□□□ 0.7
CHRNB1-206ENST00000574054 NT5EP21589 574 aa19.42■□□□□ 0.7
CHRNB1-206ENST00000574054 GDF1P27539 372 aa19.42■□□□□ 0.7
CHRNB1-206ENST00000574054 ZFP36L2P47974 494 aaKnown RBP19.42■□□□□ 0.7
CHRNB1-206ENST00000574054 XKP51811 444 aa19.42■□□□□ 0.7
CHRNB1-206ENST00000574054 MAPK12P53778 367 aa19.42■□□□□ 0.7
CHRNB1-206ENST00000574054 FBXW4P57775 412 aa19.42■□□□□ 0.7
CHRNB1-206ENST00000574054 DMRTC2Q8IXT2 367 aaPredicted RBP19.42■□□□□ 0.7
CHRNB1-206ENST00000574054 LRRC25Q8N386 305 aaPredicted RBP19.42■□□□□ 0.7
CHRNB1-206ENST00000574054 ZNF441Q8N8Z8 693 aa19.42■□□□□ 0.7
CHRNB1-206ENST00000574054 ZNF592Q92610 1267 aa19.42■□□□□ 0.7
CHRNB1-206ENST00000574054 ZNF597Q96LX8 424 aa19.42■□□□□ 0.7
CHRNB1-206ENST00000574054 Q9UFV3 132 aa19.42■□□□□ 0.7
CHRNB1-206ENST00000574054 SLC12A4Q9UP95 1085 aa19.42■□□□□ 0.7
CHRNB1-206ENST00000574054 HCFC1P51610 2035 aa19.41■□□□□ 0.7
CHRNB1-206ENST00000574054 NINQ8N4C6 2090 aa19.41■□□□□ 0.7
CHRNB1-206ENST00000574054 TRIM49D1C9J1S8 452 aa19.41■□□□□ 0.7
CHRNB1-206ENST00000574054 COL6A2P12110 1019 aa19.41■□□□□ 0.7
CHRNB1-206ENST00000574054 ADH7P40394 386 aa19.41■□□□□ 0.7
CHRNB1-206ENST00000574054 NRG3P56975 720 aa19.41■□□□□ 0.7
CHRNB1-206ENST00000574054 RPS6KA2Q15349 733 aa19.41■□□□□ 0.7
CHRNB1-206ENST00000574054 C10orf62Q5T681 223 aaPredicted RBP19.41■□□□□ 0.7
CHRNB1-206ENST00000574054 TMEM198Q66K66 360 aa19.41■□□□□ 0.7
CHRNB1-206ENST00000574054 BICRALQ6AI39 1079 aa19.41■□□□□ 0.7
CHRNB1-206ENST00000574054 COMMD6Q7Z4G1 85 aa19.41■□□□□ 0.7
CHRNB1-206ENST00000574054 CLYBLQ8N0X4 340 aa19.41■□□□□ 0.7
CHRNB1-206ENST00000574054 MMGT1Q8N4V1 131 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms