RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 PNPLA2Q96AD5 504 aa11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 ERP27Q96DN0 273 aa11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 CNRIP1Q96F85 164 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 UTP23Q9BRU9 249 aaKnown RBP11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 C1orf50Q9BV19 199 aa11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 BRINP2Q9C0B6 783 aa11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 REEP4Q9H6H4 257 aa11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 AKTIPQ9H8T0 292 aa11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 SLAMF7Q9NQ25 335 aa11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 ATAD3AQ9NVI7 634 aa11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 ASIC5Q9NY37 505 aa11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 MARCOQ9UEW3 520 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 B3GNT3Q9Y2A9 372 aa11.88□□□□□ -0.51
TRAPPC1-206ENST00000573989 TRAV17A0A0B4J275 112 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 OR5H15A6NDH6 313 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 GABRR3A8MPY1 467 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 B8ZZF3 427 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 DYNC1I1O14576 645 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 PDPK1O15530 556 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 AKAP10O43572 662 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 TBX19O60806 448 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 SLITRK5O94991 958 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 LRATO95237 230 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 WDPCPO95876 746 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 IGKV3-11P04433 115 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 JUNP05412 331 aaKnown RBP11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 PRPS1L1P21108 318 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 TACR1P25103 407 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 MLF1P58340 268 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 RNF4P78317 190 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 FUT7Q11130 342 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 MAP4K2Q12851 820 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 CEBPEQ15744 281 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 PRICKLE4Q2TBC4 344 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 HLA-DQA1Q5Y7H0 255 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 FCRLBQ6BAA4 426 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 BEST3Q8N1M1 668 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 ARMC10Q8N2F6 343 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 ZNF843Q8N446 348 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 TMEM156Q8N614 296 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 RBMXL3Q8N7X1 1067 aaKnown RBP11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 ZFP28Q8NHY6 868 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 NUBPLQ8TB37 319 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 ZNF675Q8TD23 568 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 THAP3Q8WTV1 239 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 GFM2Q969S9 779 aaKnown RBP11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 PPCDCQ96CD2 204 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 EGLN2Q96KS0 407 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 ZNF681Q96N22 645 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 MFRPQ9BY79 579 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 ZBTB20Q9HC78 741 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 SH3BP4Q9P0V3 963 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 MYOTQ9UBF9 498 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 GIMAP2Q9UG22 337 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 BAIAP2L1Q9UHR4 511 aa11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 YARS2Q9Y2Z4 477 aaKnown RBP11.87□□□□□ -0.51
TRAPPC1-206ENST00000573989 MYO1GB0I1T2 1018 aa11.86□□□□□ -0.51
TRAPPC1-206ENST00000573989 ITGA10O75578 1167 aa11.86□□□□□ -0.51
TRAPPC1-206ENST00000573989 TGDSO95455 350 aa11.86□□□□□ -0.51
TRAPPC1-206ENST00000573989 PRB1P04280 392 aa11.86□□□□□ -0.51
TRAPPC1-206ENST00000573989 CYB561P49447 251 aa11.86□□□□□ -0.51
TRAPPC1-206ENST00000573989 SSR4P51571 173 aa11.86□□□□□ -0.51
TRAPPC1-206ENST00000573989 NCBP2P52298 156 aaKnown RBP eCLIP11.86□□□□□ -0.51
TRAPPC1-206ENST00000573989 OC90Q02509 493 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC1-206ENST00000573989 ZNF169Q14929 603 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC1-206ENST00000573989 ZNF750Q32MQ0 723 aa11.86□□□□□ -0.51
TRAPPC1-206ENST00000573989 NXNQ6DKJ4 435 aa11.86□□□□□ -0.51
TRAPPC1-206ENST00000573989 FAM180BQ6P0A1 224 aa11.86□□□□□ -0.51
TRAPPC1-206ENST00000573989 DGAT2L6Q6ZPD8 337 aa11.86□□□□□ -0.51
TRAPPC1-206ENST00000573989 RGS9BPQ6ZS82 235 aa11.86□□□□□ -0.51
TRAPPC1-206ENST00000573989 Q6ZS92 163 aa11.86□□□□□ -0.51
TRAPPC1-206ENST00000573989 SPATA19Q7Z5L4 167 aa11.86□□□□□ -0.51
TRAPPC1-206ENST00000573989 CLHC1Q8NHS4 586 aa11.86□□□□□ -0.51
TRAPPC1-206ENST00000573989 SLC22A8Q8TCC7 542 aa11.86□□□□□ -0.51
TRAPPC1-206ENST00000573989 ZBED6CLQ96FA7 236 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC1-206ENST00000573989 OR10A5Q9H207 317 aa11.86□□□□□ -0.51
TRAPPC1-206ENST00000573989 PLA2G3Q9NZ20 509 aa11.86□□□□□ -0.51
TRAPPC1-206ENST00000573989 MAT2BQ9NZL9 334 aa11.86□□□□□ -0.51
TRAPPC1-206ENST00000573989 PRODH2Q9UF12 536 aa11.86□□□□□ -0.51
TRAPPC1-206ENST00000573989 BCAP29Q9UHQ4 241 aa11.86□□□□□ -0.51
TRAPPC1-206ENST00000573989 ZNF223Q9UK11 482 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC1-206ENST00000573989 C2orf92A0A1B0GVN3 265 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 A0A1W2PS29 197 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 SDHDO14521 159 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 SCAMP2O15127 329 aaKnown RBP11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 PRAMEF2O60811 474 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 G6PDP11413 515 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 CD46P15529 392 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 SSTR4P31391 388 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 TNFSF10P50591 281 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 MANFP55145 182 aaKnown RBP11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 CLDN8P56748 225 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 SLC37A1P57057 533 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 TUBA3CQ13748 450 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 PDE7AQ13946 482 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 PTGR1Q14914 329 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 MPEG1Q2M385 716 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 NADK2Q4G0N4 442 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 CPTPQ5TA50 214 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms