RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 KDM4BO94953 1096 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 LSM8O95777 96 aaKnown RBP6□□□□□ -1.45
PTPN9-204ENST00000564970 MOCS2O96007 188 aaPredicted RBP6□□□□□ -1.45
PTPN9-204ENST00000564970 F2P00734 622 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 CST1P01037 141 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 CYBBP04839 570 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 INHAP05111 366 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 HOXB5P09067 269 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 ZSCAN5DPP0CG00 497 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 CSH1P0DML2 217 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 CSH2P0DML3 217 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 C1GALT1C1LP0DN25 315 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 NR2C1P13056 603 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 ABOP16442 354 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 EPB42P16452 691 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 LBPP18428 481 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 PGAM1P18669 254 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 HOXA5P20719 270 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 KDELR1P24390 212 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 HMGB2P26583 209 aaKnown RBP6□□□□□ -1.45
PTPN9-204ENST00000564970 G0S2P27469 103 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 TEAD1P28347 426 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 SLC6A4P31645 630 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 SFNP31947 248 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 ICAM3P32942 547 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 CSNK1DP48730 415 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 SLC12A3P55017 1021 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 TIMM10P62072 90 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 BLOC1S1P78537 153 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 EMX2Q04743 252 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 TWF1Q12792 350 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 POU4F2Q12837 409 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 TSPAN31Q12999 210 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 LRRC32Q14392 662 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 MPPED2Q15777 294 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 USF2Q15853 346 aaPredicted RBP6□□□□□ -1.45
PTPN9-204ENST00000564970 EXOC3L2Q2M3D2 409 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 NKAIN1Q4KMZ8 207 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 ARL13AQ5H913 290 aaPredicted RBP6□□□□□ -1.45
PTPN9-204ENST00000564970 SPANXN3Q5MJ09 141 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 MEDAGQ5VYS4 303 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 SLC22A10Q63ZE4 541 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 GJB7Q6PEY0 223 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 FIGNL1Q6PIW4 674 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 ATRAIDQ6UW56 229 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 ALKAL1Q6UXT8 129 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 PTCHD4Q6ZW05 846 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 MOB3CQ70IA8 216 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 MON1BQ7L1V2 547 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 NUP54Q7Z3B4 507 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 SPATA19Q7Z5L4 167 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 LRRC28Q86X40 367 aaPredicted RBP6□□□□□ -1.45
PTPN9-204ENST00000564970 LDLRAD3Q86YD5 345 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 SLC34A3Q8N130 599 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 STK40Q8N2I9 435 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 PRSS35Q8N3Z0 413 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 ZNF383Q8NA42 475 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 RDM1Q8NG50 284 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 OR8J3Q8NGG0 315 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 OR5T3Q8NGG3 340 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 OR13D1Q8NGV5 346 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 OR56B4Q8NH76 319 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 ACTL9Q8TC94 416 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 SPPL2BQ8TCT7 592 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 RXFP4Q8TDU9 374 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 CMBLQ96DG6 245 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 MFSD3Q96ES6 412 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 SMARCD1Q96GM5 515 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 CELF6Q96J87 481 aaKnown RBP6□□□□□ -1.45
PTPN9-204ENST00000564970 FAM210BQ96KR6 192 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 SGCZQ96LD1 299 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 PPP1R36Q96LQ0 422 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 FCRL3Q96P31 734 aaPredicted RBP6□□□□□ -1.45
PTPN9-204ENST00000564970 TMEM209Q96SK2 561 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 PKMYT1Q99640 499 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 MAP3K3Q99759 626 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 RIOK2Q9BVS4 552 aaKnown RBP6□□□□□ -1.45
PTPN9-204ENST00000564970 IFT27Q9BW83 186 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 ACE2Q9BYF1 805 aaPredicted RBP6□□□□□ -1.45
PTPN9-204ENST00000564970 TM6SF2Q9BZW4 377 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 TMEM117Q9H0C3 514 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 TSPAN10Q9H1Z9 355 aaPredicted RBP6□□□□□ -1.45
PTPN9-204ENST00000564970 RIBC2Q9H4K1 309 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 PRDM12Q9H4Q4 367 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 WDR55Q9H6Y2 383 aaPredicted RBP6□□□□□ -1.45
PTPN9-204ENST00000564970 PPP1R3EQ9H7J1 279 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 KRCC1Q9NPI7 259 aaPredicted RBP6□□□□□ -1.45
PTPN9-204ENST00000564970 ZSCAN32Q9NX65 697 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 GTSE1Q9NYZ3 720 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 PDP1Q9P0J1 537 aaPredicted RBP6□□□□□ -1.45
PTPN9-204ENST00000564970 NLKQ9UBE8 527 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 GRHPRQ9UBQ7 328 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 ZNF629Q9UEG4 869 aaPredicted RBP6□□□□□ -1.45
PTPN9-204ENST00000564970 WASF3Q9UPY6 502 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 CLCA2Q9UQC9 943 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 TMED3Q9Y3Q3 217 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 ATG4BQ9Y4P1 393 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 PCDHGA1Q9Y5H4 931 aa6□□□□□ -1.45
PTPN9-204ENST00000564970 PUS1Q9Y606 427 aaKnown RBP eCLIP6□□□□□ -1.45
PTPN9-204ENST00000564970 POMT1Q9Y6A1 747 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms