RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 WLSQ5T9L3 541 aa13.82□□□□□ -0.2
SPG7-210ENST00000564409 C6orf163Q5TEZ5 329 aa13.82□□□□□ -0.2
SPG7-210ENST00000564409 HLA-DQA1Q5Y7H0 255 aa13.82□□□□□ -0.2
SPG7-210ENST00000564409 ADGRD1Q6QNK2 874 aa13.82□□□□□ -0.2
SPG7-210ENST00000564409 B3GNT6Q6ZMB0 384 aa13.82□□□□□ -0.2
SPG7-210ENST00000564409 MILR1Q7Z6M3 343 aa13.82□□□□□ -0.2
SPG7-210ENST00000564409 LCA5Q86VQ0 697 aa13.82□□□□□ -0.2
SPG7-210ENST00000564409 LRRC25Q8N386 305 aaPredicted RBP13.82□□□□□ -0.2
SPG7-210ENST00000564409 FAM13CQ8NE31 585 aa13.82□□□□□ -0.2
SPG7-210ENST00000564409 OR7G1Q8NGA0 311 aa13.82□□□□□ -0.2
SPG7-210ENST00000564409 OR52B6Q8NGF0 335 aa13.82□□□□□ -0.2
SPG7-210ENST00000564409 SREK1Q8WXA9 508 aaKnown RBP13.82□□□□□ -0.2
SPG7-210ENST00000564409 C16orf45Q96MC5 204 aaPredicted RBP13.82□□□□□ -0.2
SPG7-210ENST00000564409 GAL3ST4Q96RP7 486 aa13.82□□□□□ -0.2
SPG7-210ENST00000564409 TTYH2Q9BSA4 534 aa13.82□□□□□ -0.2
SPG7-210ENST00000564409 C1QTNF3Q9BXJ4 246 aa13.82□□□□□ -0.2
SPG7-210ENST00000564409 MRPL46Q9H2W6 279 aaKnown RBP13.82□□□□□ -0.2
SPG7-210ENST00000564409 ELOVL6Q9H5J4 265 aa13.82□□□□□ -0.2
SPG7-210ENST00000564409 BRF2Q9HAW0 419 aa13.82□□□□□ -0.2
SPG7-210ENST00000564409 MCCC2Q9HCC0 563 aa13.82□□□□□ -0.2
SPG7-210ENST00000564409 PNPLA3Q9NST1 481 aa13.82□□□□□ -0.2
SPG7-210ENST00000564409 XPR1Q9UBH6 696 aa13.82□□□□□ -0.2
SPG7-210ENST00000564409 ACAD8Q9UKU7 415 aa13.82□□□□□ -0.2
SPG7-210ENST00000564409 CHCHD2Q9Y6H1 151 aaPredicted RBP13.82□□□□□ -0.2
SPG7-210ENST00000564409 ADGRG4Q8IZF6 3080 aa13.81□□□□□ -0.2
SPG7-210ENST00000564409 TRGV5A0A0B4J1U4 118 aa13.81□□□□□ -0.2
SPG7-210ENST00000564409 C2orf92A0A1B0GVN3 265 aa13.81□□□□□ -0.2
SPG7-210ENST00000564409 ATP6AP2A0A1C7CYW4 349 aa13.81□□□□□ -0.2
SPG7-210ENST00000564409 GOLGA6L10A6NI86 522 aa13.81□□□□□ -0.2
SPG7-210ENST00000564409 CDH16O75309 829 aa13.81□□□□□ -0.2
SPG7-210ENST00000564409 PRKRAO75569 313 aaKnown RBP13.81□□□□□ -0.2
SPG7-210ENST00000564409 ATP6AP2O75787 350 aa13.81□□□□□ -0.2
SPG7-210ENST00000564409 TOXO94900 526 aa13.81□□□□□ -0.2
SPG7-210ENST00000564409 SNX4O95219 450 aa13.81□□□□□ -0.2
SPG7-210ENST00000564409 SNRPAP09012 282 aaKnown RBP13.81□□□□□ -0.2
SPG7-210ENST00000564409 PIGAP37287 484 aa13.81□□□□□ -0.2
SPG7-210ENST00000564409 NUP107P57740 925 aa13.81□□□□□ -0.2
SPG7-210ENST00000564409 RPP38P78345 283 aaKnown RBP13.81□□□□□ -0.2
SPG7-210ENST00000564409 CCNYL2Q5T2Q4 361 aa13.81□□□□□ -0.2
SPG7-210ENST00000564409 ZNF585AQ6P3V2 769 aa13.81□□□□□ -0.2
SPG7-210ENST00000564409 GALNT12Q8IXK2 581 aa13.81□□□□□ -0.2
SPG7-210ENST00000564409 METTL4Q8N3J2 472 aa13.81□□□□□ -0.2
SPG7-210ENST00000564409 ZNF441Q8N8Z8 693 aa13.81□□□□□ -0.2
SPG7-210ENST00000564409 IFT81Q8WYA0 676 aa13.81□□□□□ -0.2
SPG7-210ENST00000564409 CDK15Q96Q40 435 aa13.81□□□□□ -0.2
SPG7-210ENST00000564409 EXO5Q9H790 373 aa13.81□□□□□ -0.2
SPG7-210ENST00000564409 ZNF703Q9H7S9 590 aaPredicted RBP13.81□□□□□ -0.2
SPG7-210ENST00000564409 ZBTB26Q9HCK0 441 aa13.81□□□□□ -0.2
SPG7-210ENST00000564409 DMGDHQ9UI17 866 aaKnown RBP13.81□□□□□ -0.2
SPG7-210ENST00000564409 SNX6Q9UNH7 406 aa13.81□□□□□ -0.2
SPG7-210ENST00000564409 CFL2Q9Y281 166 aa13.81□□□□□ -0.2
SPG7-210ENST00000564409 EXPH5Q8NEV8 1989 aa13.81□□□□□ -0.2
SPG7-210ENST00000564409 PDZD2O15018 2839 aa13.81□□□□□ -0.2
SPG7-210ENST00000564409 NCKAP5O14513 1909 aa13.8□□□□□ -0.2
SPG7-210ENST00000564409 FBN2P35556 2912 aa13.8□□□□□ -0.2
SPG7-210ENST00000564409 DCHS2Q6V1P9 2916 aa13.8□□□□□ -0.2
SPG7-210ENST00000564409 C1orf226A1L170 272 aa13.8□□□□□ -0.2
SPG7-210ENST00000564409 TRIM49D1C9J1S8 452 aa13.8□□□□□ -0.2
SPG7-210ENST00000564409 PGRMC2O15173 223 aa13.8□□□□□ -0.2
SPG7-210ENST00000564409 KLK1P06870 262 aa13.8□□□□□ -0.2
SPG7-210ENST00000564409 RPS17P08708 135 aaKnown RBP13.8□□□□□ -0.2
SPG7-210ENST00000564409 CTAGE8P0CG41 777 aa13.8□□□□□ -0.2
SPG7-210ENST00000564409 PORP16435 677 aaPredicted RBP13.8□□□□□ -0.2
SPG7-210ENST00000564409 MSX1P28360 303 aa13.8□□□□□ -0.2
SPG7-210ENST00000564409 ZFP36L2P47974 494 aaKnown RBP13.8□□□□□ -0.2
SPG7-210ENST00000564409 XKP51811 444 aa13.8□□□□□ -0.2
SPG7-210ENST00000564409 MAPK12P53778 367 aa13.8□□□□□ -0.2
SPG7-210ENST00000564409 TLE4Q04727 773 aa13.8□□□□□ -0.2
SPG7-210ENST00000564409 TFF3Q07654 80 aa13.8□□□□□ -0.2
SPG7-210ENST00000564409 RPS6KA2Q15349 733 aa13.8□□□□□ -0.2
SPG7-210ENST00000564409 SF3B4Q15427 424 aaKnown RBP eCLIP13.8□□□□□ -0.22e-6■■■■■ 27.7
SPG7-210ENST00000564409 TMEM198Q66K66 360 aa13.8□□□□□ -0.2
SPG7-210ENST00000564409 CTAGE4Q8IX94 777 aa13.8□□□□□ -0.2
SPG7-210ENST00000564409 CLYBLQ8N0X4 340 aa13.8□□□□□ -0.2
SPG7-210ENST00000564409 OR10G3Q8NGC4 313 aa13.8□□□□□ -0.2
SPG7-210ENST00000564409 OR5M9Q8NGP3 310 aa13.8□□□□□ -0.2
SPG7-210ENST00000564409 OR10Q1Q8NGQ4 319 aa13.8□□□□□ -0.2
SPG7-210ENST00000564409 DCAKDQ8WVC6 231 aa13.8□□□□□ -0.2
SPG7-210ENST00000564409 MTBPQ96DY7 904 aa13.8□□□□□ -0.2
SPG7-210ENST00000564409 ZNF597Q96LX8 424 aa13.8□□□□□ -0.2
SPG7-210ENST00000564409 DOHHQ9BU89 302 aa13.8□□□□□ -0.2
SPG7-210ENST00000564409 SEMA4BQ9NPR2 832 aaPredicted RBP13.8□□□□□ -0.2
SPG7-210ENST00000564409 ZNF358Q9NW07 568 aa13.8□□□□□ -0.2
SPG7-210ENST00000564409 TEX10Q9NXF1 929 aaPredicted RBP13.8□□□□□ -0.2
SPG7-210ENST00000564409 CNOT11Q9UKZ1 510 aaKnown RBP13.8□□□□□ -0.2
SPG7-210ENST00000564409 PSME2Q9UL46 239 aa13.8□□□□□ -0.2
SPG7-210ENST00000564409 NPFFR2Q9Y5X5 522 aa13.8□□□□□ -0.2
SPG7-210ENST00000564409 LIPGQ9Y5X9 500 aa13.8□□□□□ -0.2
SPG7-210ENST00000564409 POC1B-GALNT4F8VUJ3 575 aa13.79□□□□□ -0.2
SPG7-210ENST00000564409 KIF2AO00139 706 aaPredicted RBP13.79□□□□□ -0.2
SPG7-210ENST00000564409 TRIM3O75382 744 aaPredicted RBP13.79□□□□□ -0.2
SPG7-210ENST00000564409 GBAP04062 536 aa13.79□□□□□ -0.2
SPG7-210ENST00000564409 CLPSP04118 112 aa13.79□□□□□ -0.2
SPG7-210ENST00000564409 ABHD2P08910 425 aa13.79□□□□□ -0.2
SPG7-210ENST00000564409 CELA3AP09093 270 aa13.79□□□□□ -0.2
SPG7-210ENST00000564409 GLI4P10075 376 aa13.79□□□□□ -0.2
SPG7-210ENST00000564409 HSD3B1P14060 373 aa13.79□□□□□ -0.2
SPG7-210ENST00000564409 CPMP14384 443 aa13.79□□□□□ -0.2
SPG7-210ENST00000564409 NAGAP17050 411 aa13.79□□□□□ -0.2
SPG7-210ENST00000564409 TAC1P20366 129 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms