RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 CEBPEQ15744 281 aa18.02■□□□□ 0.47
SMPD3-203ENST00000563226 SMN1Q16637 294 aaKnown RBP18.02■□□□□ 0.47
SMPD3-203ENST00000563226 GPR107Q5VW38 600 aa18.02■□□□□ 0.47
SMPD3-203ENST00000563226 LACC1Q8IV20 430 aa18.02■□□□□ 0.47
SMPD3-203ENST00000563226 SFXN5Q8TD22 340 aa18.02■□□□□ 0.47
SMPD3-203ENST00000563226 ZNF566Q969W8 418 aa18.02■□□□□ 0.47
SMPD3-203ENST00000563226 RHNO1Q9BSD3 238 aa18.02■□□□□ 0.47
SMPD3-203ENST00000563226 NAA50Q9GZZ1 169 aaKnown RBP18.02■□□□□ 0.47
SMPD3-203ENST00000563226 KCMF1Q9P0J7 381 aa18.02■□□□□ 0.47
SMPD3-203ENST00000563226 KCNE3Q9Y6H6 103 aa18.02■□□□□ 0.47
SMPD3-203ENST00000563226 FAM227AF5H4B4 570 aa18.01■□□□□ 0.47
SMPD3-203ENST00000563226 GADD45GO95257 159 aa18.01■□□□□ 0.47
SMPD3-203ENST00000563226 CHRM4P08173 479 aa18.01■□□□□ 0.47
SMPD3-203ENST00000563226 NR2F1P10589 423 aa18.01■□□□□ 0.47
SMPD3-203ENST00000563226 JUNBP17275 347 aaPredicted RBP18.01■□□□□ 0.47
SMPD3-203ENST00000563226 RHCEP18577 417 aa18.01■□□□□ 0.47
SMPD3-203ENST00000563226 KCNJ5P48544 419 aa18.01■□□□□ 0.47
SMPD3-203ENST00000563226 PXNP49023 591 aaPredicted RBP18.01■□□□□ 0.47
SMPD3-203ENST00000563226 KHKP50053 298 aa18.01■□□□□ 0.47
SMPD3-203ENST00000563226 OLR1P78380 273 aa18.01■□□□□ 0.47
SMPD3-203ENST00000563226 ROR2Q01974 943 aaKnown RBP18.01■□□□□ 0.47
SMPD3-203ENST00000563226 RUNX2Q13950 521 aa18.01■□□□□ 0.47
SMPD3-203ENST00000563226 MAD2L1BPQ15013 274 aaPredicted RBP18.01■□□□□ 0.47
SMPD3-203ENST00000563226 ZNF438Q7Z4V0 828 aa18.01■□□□□ 0.47
SMPD3-203ENST00000563226 TMEFF1Q8IYR6 380 aa18.01■□□□□ 0.47
SMPD3-203ENST00000563226 VANGL1Q8TAA9 524 aaPredicted RBP18.01■□□□□ 0.47
SMPD3-203ENST00000563226 KAT2AQ92830 837 aa18.01■□□□□ 0.47
SMPD3-203ENST00000563226 APOL4Q9BPW4 351 aa18.01■□□□□ 0.47
SMPD3-203ENST00000563226 VCX3AQ9NNX9 186 aa18.01■□□□□ 0.47
SMPD3-203ENST00000563226 RASSF1Q9NS23 344 aa18.01■□□□□ 0.47
SMPD3-203ENST00000563226 HRASLS2Q9NWW9 162 aa18.01■□□□□ 0.47
SMPD3-203ENST00000563226 BLOC1S6Q9UL45 172 aa18.01■□□□□ 0.47
SMPD3-203ENST00000563226 FAM32AQ9Y421 112 aaKnown RBP18.01■□□□□ 0.47
SMPD3-203ENST00000563226 PCDHGA6Q9Y5G7 932 aa18.01■□□□□ 0.47
SMPD3-203ENST00000563226 IGHV1OR15-9A0A0B4J2B8 117 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 ZNF860A6NHJ4 632 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 C2orf74A8MZ97 194 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 CHURC1-FNTBB4DL54 471 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 NDUFS2O75306 463 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 PDE9AO76083 593 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 CCDC159P0C7I6 412 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 TNFRSF17Q02223 184 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 PRSS41Q7RTY9 318 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 OR13F1Q8NGS4 319 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 ZFPM2Q8WW38 1151 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 C12orf43Q96C57 262 aaKnown RBP18■□□□□ 0.47
SMPD3-203ENST00000563226 ZFYVE21Q9BQ24 234 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 KCND3Q9UK17 655 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 GPC6Q9Y625 555 aaPredicted RBP18■□□□□ 0.47
SMPD3-203ENST00000563226 HSPE1-MOB4S4R3N1 261 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 H0YGG7 62 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 PCDHGA12O60330 932 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 TRMUO75648 421 aaKnown RBP18■□□□□ 0.47
SMPD3-203ENST00000563226 EIF2S1P05198 315 aaKnown RBP18■□□□□ 0.47
SMPD3-203ENST00000563226 FHP07954 510 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 CTSEP14091 401 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 RPS6KA3P51812 740 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 HMGA2P52926 109 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 ARF3P61204 181 aaPredicted RBP18■□□□□ 0.47
SMPD3-203ENST00000563226 CWF19L1Q69YN2 538 aaKnown RBP18■□□□□ 0.47
SMPD3-203ENST00000563226 TSPYL5Q86VY4 417 aaPredicted RBP18■□□□□ 0.47
SMPD3-203ENST00000563226 BAHD1Q8TBE0 780 aaPredicted RBP18■□□□□ 0.47
SMPD3-203ENST00000563226 APH1BQ8WW43 257 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 PROX1Q92786 737 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 ELP4Q96EB1 424 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 KLHDC7BQ96G42 594 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 HRASLS5Q96KN8 279 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 ZNF607Q96SK3 696 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 LRRC61Q9BV99 259 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 LHPPQ9H008 270 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 EQTNQ9NQ60 294 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 SEC14L3Q9UDX4 400 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 NAALAD2Q9Y3Q0 740 aa18■□□□□ 0.47
SMPD3-203ENST00000563226 KIR2DS5A0A0G2JLQ3 304 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 A0A0G2JNG1 304 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 TMX2-CTNND1H3BSU7 103 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 KIR2DS3K7RE56 304 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 ANXA8P13928 327 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 POU2F1P14859 743 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 CPN2P22792 545 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 MPIP34949 423 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 SIM1P81133 766 aaPredicted RBP17.99■□□□□ 0.47
SMPD3-203ENST00000563226 FZD5Q13467 585 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 KIR2DS5Q14953 304 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 SUZ12Q15022 739 aaKnown RBP17.99■□□□□ 0.47
SMPD3-203ENST00000563226 TCTN3Q6NUS6 607 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 OR4N5Q8IXE1 308 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 ENTHD1Q8IYW4 607 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 PHF10Q8WUB8 498 aaKnown RBP17.99■□□□□ 0.47
SMPD3-203ENST00000563226 RSC1A1Q92681 617 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 ZNF354BQ96LW1 612 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 SERINC2Q96SA4 455 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 GIMAP4Q9NUV9 329 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 HEMK1Q9Y5R4 338 aaPredicted RBP17.99■□□□□ 0.47
SMPD3-203ENST00000563226 ZNF780BQ9Y6R6 833 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 TRBV4-1A0A0J9YWV2 114 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 TMEM247A6NEH6 219 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 B4DGG1 531 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 EMC8O43402 210 aa17.99■□□□□ 0.47
SMPD3-203ENST00000563226 HCRTR1O43613 425 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms