RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 OR51I1Q9H343 314 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 A4GALTQ9NPC4 353 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 UNC13CQ8NB66 2214 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 PRAMEF27A3QJZ7 478 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 M0QX08 132 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 UPK1AO00322 258 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 HMGN2P05204 90 aaKnown RBP16.95■□□□□ 0.3
COMMD4-208ENST00000563220 FHP07954 510 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 SYPP08247 313 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 TFPTP0C1Z6 253 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 PCBP3P57721 371 aaKnown RBP16.95■□□□□ 0.3
COMMD4-208ENST00000563220 GRM7Q14831 915 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 LASP1Q14847 261 aaKnown RBP16.95■□□□□ 0.3
COMMD4-208ENST00000563220 SYT16Q17RD7 645 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 CYBRD1Q53TN4 286 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 PRAMEF17Q5VTA0 474 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 METTL27Q8N6F8 245 aaPredicted RBP16.95■□□□□ 0.3
COMMD4-208ENST00000563220 NUP43Q8NFH3 380 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 OR7G2Q8NG99 324 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 OR1L3Q8NH93 324 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 PEX11GQ96HA9 241 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 HSH2DQ96JZ2 352 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 RBCK1Q9BYM8 510 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 ENAMQ9NRM1 1142 aa16.95■□□□□ 0.3
COMMD4-208ENST00000563220 DNAAF2Q9NVR5 837 aaKnown RBP16.95■□□□□ 0.3
COMMD4-208ENST00000563220 CNOT11Q9UKZ1 510 aaKnown RBP16.95■□□□□ 0.3
COMMD4-208ENST00000563220 PDLIM1O00151 329 aa16.94■□□□□ 0.3
COMMD4-208ENST00000563220 SOCS2O14508 198 aa16.94■□□□□ 0.3
COMMD4-208ENST00000563220 ACOX3O15254 700 aa16.94■□□□□ 0.3
COMMD4-208ENST00000563220 PCDHGA12O60330 932 aa16.94■□□□□ 0.3
COMMD4-208ENST00000563220 NME6O75414 186 aaPredicted RBP16.94■□□□□ 0.3
COMMD4-208ENST00000563220 OR2B3O76000 313 aa16.94■□□□□ 0.3
COMMD4-208ENST00000563220 OPN1SWP03999 348 aa16.94■□□□□ 0.3
COMMD4-208ENST00000563220 SEMG1P04279 462 aa16.94■□□□□ 0.3
COMMD4-208ENST00000563220 TCEAL6Q6IPX3 200 aa16.94■□□□□ 0.3
COMMD4-208ENST00000563220 ZBTB49Q6ZSB9 765 aa16.94■□□□□ 0.3
COMMD4-208ENST00000563220 KMT5CQ86Y97 462 aa16.94■□□□□ 0.3
COMMD4-208ENST00000563220 SIMC1Q8NDZ2 872 aa16.94■□□□□ 0.3
COMMD4-208ENST00000563220 OR56A1Q8NGH5 318 aa16.94■□□□□ 0.3
COMMD4-208ENST00000563220 DOK4Q8TEW6 326 aa16.94■□□□□ 0.3
COMMD4-208ENST00000563220 TCEAL3Q969E4 200 aa16.94■□□□□ 0.3
COMMD4-208ENST00000563220 TAMM41Q96BW9 452 aa16.94■□□□□ 0.3
COMMD4-208ENST00000563220 MOAP1Q96BY2 351 aa16.94■□□□□ 0.3
COMMD4-208ENST00000563220 MMABQ96EY8 250 aaPredicted RBP16.94■□□□□ 0.3
COMMD4-208ENST00000563220 OTUB1Q96FW1 271 aaPredicted RBP16.94■□□□□ 0.3
COMMD4-208ENST00000563220 ZNF768Q9H5H4 540 aaKnown RBP16.94■□□□□ 0.3
COMMD4-208ENST00000563220 C3orf14Q9HBI5 128 aa16.94■□□□□ 0.3
COMMD4-208ENST00000563220 OAZ3Q9UMX2 235 aa16.94■□□□□ 0.3
COMMD4-208ENST00000563220 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 PRSS23O95084 383 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 RPLP0P05388 317 aaKnown RBP16.93■□□□□ 0.3
COMMD4-208ENST00000563220 BCHEP06276 602 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 RNH1P13489 461 aaKnown RBP16.93■□□□□ 0.3
COMMD4-208ENST00000563220 PAX7P23759 505 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 MPLP40238 635 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 MAGEA2P43356 314 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 EMP3P54852 163 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 SKP1P63208 163 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 PRR5P85299 388 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 ERV3-1Q14264 604 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 NRF1Q16656 503 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 CRB2Q5IJ48 1285 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 INTS11Q5TA45 600 aaKnown RBP16.93■□□□□ 0.3
COMMD4-208ENST00000563220 REEP3Q6NUK4 255 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 NIPAL1Q6NVV3 410 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 BHLHB9Q6PI77 547 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 SLC44A2Q8IWA5 706 aaPredicted RBP16.93■□□□□ 0.3
COMMD4-208ENST00000563220 XAGE5Q8WWM1 108 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 GIMAP5Q96F15 307 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 TMEM19Q96HH6 336 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 TPD52L3Q96J77 140 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 BDH2Q9BUT1 245 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 LRRN3Q9H3W5 708 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 CUTCQ9NTM9 273 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 NTMQ9P121 344 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 TRPC4Q9UBN4 977 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 ANGPT4Q9Y264 503 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 C7orf72A4D263 438 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 PLOD2O00469 737 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 SUV39H1O43463 412 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 DEAF1O75398 565 aaPredicted RBP16.93■□□□□ 0.3
COMMD4-208ENST00000563220 CPNE6O95741 557 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 CST1P01037 141 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 AVPR1BP47901 424 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 SELENOWP63302 87 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 PROX2Q3B8N5 592 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.93■□□□□ 0.3
COMMD4-208ENST00000563220 TRMT12Q53H54 448 aaKnown RBP16.93■□□□□ 0.3
COMMD4-208ENST00000563220 ZNF628Q5EBL2 1059 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 RPS26P11Q5JNZ5 115 aaPredicted RBP16.93■□□□□ 0.3
COMMD4-208ENST00000563220 PPP4R4Q6NUP7 873 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 FAM111BQ6SJ93 734 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 FKBP9P1Q75LS8 142 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 ZDHHC21Q8IVQ6 265 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 MIPOL1Q8TD10 442 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 VPS50Q96JG6 964 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 IL1RAPQ9NPH3 570 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 ADPRHL2Q9NX46 363 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 PDP2Q9P2J9 529 aa16.93■□□□□ 0.3
COMMD4-208ENST00000563220 TOX3O15405 576 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms