RNA–Protein interactions for RNA: ENST00000562325.5

CDH11-203, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-203ENST00000562325 PSD3Q9NYI0 1048 aa17.74■□□□□ 0.43
CDH11-203ENST00000562325 NUDT4Q9NZJ9 180 aa17.74■□□□□ 0.43
CDH11-203ENST00000562325 RNF112Q9ULX5 631 aa17.74■□□□□ 0.43
CDH11-203ENST00000562325 C15orf41Q9Y2V0 281 aa17.74■□□□□ 0.43
CDH11-203ENST00000562325 PCDHGA11Q9Y5H2 935 aa17.74■□□□□ 0.43
CDH11-203ENST00000562325 DNHD1Q96M86 4753 aa17.73■□□□□ 0.43
CDH11-203ENST00000562325 CCDC189A1A4V9 331 aa17.73■□□□□ 0.43
CDH11-203ENST00000562325 CLCA1A8K7I4 914 aa17.73■□□□□ 0.43
CDH11-203ENST00000562325 PLPP1O14494 284 aa17.73■□□□□ 0.43
CDH11-203ENST00000562325 SLC35E2BP0CK96 405 aa17.73■□□□□ 0.43
CDH11-203ENST00000562325 SLC35E2P0CK97 266 aa17.73■□□□□ 0.43
CDH11-203ENST00000562325 PCNAP12004 261 aa17.73■□□□□ 0.43
CDH11-203ENST00000562325 PTX3P26022 381 aaPredicted RBP17.73■□□□□ 0.43
CDH11-203ENST00000562325 PHEXP78562 749 aa17.73■□□□□ 0.43
CDH11-203ENST00000562325 ZNF267Q14586 743 aaPredicted RBP17.73■□□□□ 0.43
CDH11-203ENST00000562325 FBXO48Q5FWF7 155 aa17.73■□□□□ 0.43
CDH11-203ENST00000562325 MRM1Q6IN84 353 aaKnown RBP17.73■□□□□ 0.43
CDH11-203ENST00000562325 TMEM81Q6P7N7 255 aa17.73■□□□□ 0.43
CDH11-203ENST00000562325 SCIMPQ6UWF3 145 aa17.73■□□□□ 0.43
CDH11-203ENST00000562325 DGAT2L6Q6ZPD8 337 aa17.73■□□□□ 0.43
CDH11-203ENST00000562325 SPATA6LQ8N4H0 392 aa17.73■□□□□ 0.43
CDH11-203ENST00000562325 WFDC11Q8NEX6 87 aa17.73■□□□□ 0.43
CDH11-203ENST00000562325 HUS1BQ8NHY5 278 aa17.73■□□□□ 0.43
CDH11-203ENST00000562325 SPPL2AQ8TCT8 520 aa17.73■□□□□ 0.43
CDH11-203ENST00000562325 ZPLD1Q8TCW7 415 aa17.73■□□□□ 0.43
CDH11-203ENST00000562325 SMPDL3BQ92485 455 aa17.73■□□□□ 0.43
CDH11-203ENST00000562325 ISL2Q96A47 359 aa17.73■□□□□ 0.43
CDH11-203ENST00000562325 TMEM41AQ96HV5 264 aa17.73■□□□□ 0.43
CDH11-203ENST00000562325 RILPQ96NA2 401 aa17.73■□□□□ 0.43
CDH11-203ENST00000562325 RBBP8Q99708 897 aa17.73■□□□□ 0.43
CDH11-203ENST00000562325 DDX31Q9H8H2 851 aaKnown RBP17.73■□□□□ 0.43
CDH11-203ENST00000562325 WDR41Q9HAD4 459 aa17.73■□□□□ 0.43
CDH11-203ENST00000562325 OPTCQ9UBM4 332 aa17.73■□□□□ 0.43
CDH11-203ENST00000562325 MTO1Q9Y2Z2 717 aaKnown RBP17.73■□□□□ 0.43
CDH11-203ENST00000562325 MPDZO75970 2070 aa17.73■□□□□ 0.43
CDH11-203ENST00000562325 C2orf92A0A1B0GVN3 265 aa17.72■□□□□ 0.43
CDH11-203ENST00000562325 UGDHO60701 494 aa17.72■□□□□ 0.43
CDH11-203ENST00000562325 ACTL6AO96019 429 aa17.72■□□□□ 0.43
CDH11-203ENST00000562325 INHBBP09529 407 aa17.72■□□□□ 0.43
CDH11-203ENST00000562325 EPB42P16452 691 aa17.72■□□□□ 0.43
CDH11-203ENST00000562325 GP5P40197 560 aa17.72■□□□□ 0.43
CDH11-203ENST00000562325 NRG3P56975 720 aa17.72■□□□□ 0.43
CDH11-203ENST00000562325 RAB10P61026 200 aa17.72■□□□□ 0.43
CDH11-203ENST00000562325 DCAF7P61962 342 aa17.72■□□□□ 0.43
CDH11-203ENST00000562325 EEF1A1P68104 462 aaKnown RBP17.72■□□□□ 0.43
CDH11-203ENST00000562325 CUL3Q13618 768 aa17.72■□□□□ 0.43
CDH11-203ENST00000562325 RCAN2Q14206 197 aa17.72■□□□□ 0.43
CDH11-203ENST00000562325 FASTKD3Q14CZ7 662 aaKnown RBP17.72■□□□□ 0.43
CDH11-203ENST00000562325 EEF1A1P5Q5VTE0 462 aa17.72■□□□□ 0.43
CDH11-203ENST00000562325 LIPJQ5W064 366 aa17.72■□□□□ 0.43
CDH11-203ENST00000562325 REPS1Q96D71 796 aa17.72■□□□□ 0.43
CDH11-203ENST00000562325 SFXN3Q9BWM7 321 aa17.72■□□□□ 0.43
CDH11-203ENST00000562325 OR51B5Q9H339 312 aa17.72■□□□□ 0.43
CDH11-203ENST00000562325 NPFFR2Q9Y5X5 522 aa17.72■□□□□ 0.43
CDH11-203ENST00000562325 PHGDHO43175 533 aaKnown RBP17.71■□□□□ 0.43
CDH11-203ENST00000562325 KERAO60938 352 aa17.71■□□□□ 0.43
CDH11-203ENST00000562325 TRAPPC6AO75865 159 aa17.71■□□□□ 0.43
CDH11-203ENST00000562325 CLPSP04118 112 aa17.71■□□□□ 0.43
CDH11-203ENST00000562325 NR2F6P10588 404 aa17.71■□□□□ 0.43
CDH11-203ENST00000562325 NAGAP17050 411 aa17.71■□□□□ 0.43
CDH11-203ENST00000562325 GCKP35557 465 aa17.71■□□□□ 0.43
CDH11-203ENST00000562325 CASP3P42574 277 aa17.71■□□□□ 0.43
CDH11-203ENST00000562325 MASP1P48740 699 aa17.71■□□□□ 0.43
CDH11-203ENST00000562325 PCYT1AP49585 367 aa17.71■□□□□ 0.43
CDH11-203ENST00000562325 HNRNPH2P55795 449 aaKnown RBP17.71■□□□□ 0.43
CDH11-203ENST00000562325 FNDC7Q5VTL7 733 aa17.71■□□□□ 0.43
CDH11-203ENST00000562325 HLA-DQA1Q5Y7H0 255 aa17.71■□□□□ 0.43
CDH11-203ENST00000562325 C18orf63Q68DL7 685 aa17.71■□□□□ 0.43
CDH11-203ENST00000562325 CCDC91Q7Z6B0 441 aa17.71■□□□□ 0.43
CDH11-203ENST00000562325 ZBED8Q8IZ13 594 aa17.71■□□□□ 0.43
CDH11-203ENST00000562325 WDYHV1Q96HA8 205 aa17.71■□□□□ 0.43
CDH11-203ENST00000562325 UCN2Q96RP3 112 aa17.71■□□□□ 0.43
CDH11-203ENST00000562325 YIPF4Q9BSR8 244 aa17.71■□□□□ 0.43
CDH11-203ENST00000562325 ZNF717Q9BY31 904 aaPredicted RBP17.71■□□□□ 0.43
CDH11-203ENST00000562325 ACBD3Q9H3P7 528 aa17.71■□□□□ 0.43
CDH11-203ENST00000562325 CAB39LQ9H9S4 337 aa17.71■□□□□ 0.43
CDH11-203ENST00000562325 CXorf21Q9HAI6 301 aa17.71■□□□□ 0.43
CDH11-203ENST00000562325 NMRAL1Q9HBL8 299 aa17.71■□□□□ 0.43
CDH11-203ENST00000562325 PRM3Q9NNZ6 103 aa17.71■□□□□ 0.43
CDH11-203ENST00000562325 SMYD2Q9NRG4 433 aa17.71■□□□□ 0.43
CDH11-203ENST00000562325 TRMT1Q9NXH9 659 aaKnown RBP17.71■□□□□ 0.43
CDH11-203ENST00000562325 ASB4Q9Y574 426 aa17.71■□□□□ 0.43
CDH11-203ENST00000562325 NINQ8N4C6 2090 aa17.71■□□□□ 0.43
CDH11-203ENST00000562325 A0A0A6YYD5 115 aa17.7■□□□□ 0.42
CDH11-203ENST00000562325 H0YIV9 168 aa17.7■□□□□ 0.42
CDH11-203ENST00000562325 SAP18O00422 153 aaKnown RBP17.7■□□□□ 0.42
CDH11-203ENST00000562325 EIF3HO15372 352 aaKnown RBP eCLIP17.7■□□□□ 0.42
CDH11-203ENST00000562325 ARHGEF9O43307 516 aa17.7■□□□□ 0.42
CDH11-203ENST00000562325 ZSCAN12O43309 604 aa17.7■□□□□ 0.42
CDH11-203ENST00000562325 HRGP04196 525 aa17.7■□□□□ 0.42
CDH11-203ENST00000562325 RHOXF2BP0C7M4 288 aa17.7■□□□□ 0.42
CDH11-203ENST00000562325 CPN1P15169 458 aa17.7■□□□□ 0.42
CDH11-203ENST00000562325 BMP7P18075 431 aa17.7■□□□□ 0.42
CDH11-203ENST00000562325 ADSLP30566 484 aaPredicted RBP17.7■□□□□ 0.42
CDH11-203ENST00000562325 FUT7Q11130 342 aa17.7■□□□□ 0.42
CDH11-203ENST00000562325 SNTA1Q13424 505 aa17.7■□□□□ 0.42
CDH11-203ENST00000562325 TIGD3Q6B0B8 471 aa17.7■□□□□ 0.42
CDH11-203ENST00000562325 OR52E8Q6IFG1 317 aa17.7■□□□□ 0.42
CDH11-203ENST00000562325 ISCA2Q86U28 154 aa17.7■□□□□ 0.42
CDH11-203ENST00000562325 PYROXD1Q8WU10 500 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms