RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 SMYD1Q8NB12 490 aa11.92□□□□□ -0.5
AC055717.2-201ENST00000561864 GPR32P1Q8NGA4 272 aa11.92□□□□□ -0.5
AC055717.2-201ENST00000561864 ZCCHC10Q8TBK6 192 aa11.92□□□□□ -0.5
AC055717.2-201ENST00000561864 ZDHHC1Q8WTX9 485 aa11.92□□□□□ -0.5
AC055717.2-201ENST00000561864 PATE1Q8WXA2 126 aa11.92□□□□□ -0.5
AC055717.2-201ENST00000561864 KLHL6Q8WZ60 621 aa11.92□□□□□ -0.5
AC055717.2-201ENST00000561864 TMIGD2Q96BF3 282 aa11.92□□□□□ -0.5
AC055717.2-201ENST00000561864 NMD3Q96D46 503 aaKnown RBP11.92□□□□□ -0.5
AC055717.2-201ENST00000561864 DHRS1Q96LJ7 313 aa11.92□□□□□ -0.5
AC055717.2-201ENST00000561864 FEVQ99581 238 aa11.92□□□□□ -0.5
AC055717.2-201ENST00000561864 TREX2Q9BQ50 279 aaPredicted RBP11.92□□□□□ -0.5
AC055717.2-201ENST00000561864 LRRC61Q9BV99 259 aa11.92□□□□□ -0.5
AC055717.2-201ENST00000561864 LTB4R2Q9NPC1 389 aa11.92□□□□□ -0.5
AC055717.2-201ENST00000561864 ACER3Q9NUN7 267 aa11.92□□□□□ -0.5
AC055717.2-201ENST00000561864 HRASLS2Q9NWW9 162 aa11.92□□□□□ -0.5
AC055717.2-201ENST00000561864 CALML5Q9NZT1 146 aa11.92□□□□□ -0.5
AC055717.2-201ENST00000561864 KCMF1Q9P0J7 381 aa11.92□□□□□ -0.5
AC055717.2-201ENST00000561864 TMEM9Q9P0T7 183 aa11.92□□□□□ -0.5
AC055717.2-201ENST00000561864 NTMQ9P121 344 aa11.92□□□□□ -0.5
AC055717.2-201ENST00000561864 SEC14L3Q9UDX4 400 aa11.92□□□□□ -0.5
AC055717.2-201ENST00000561864 LIPT1Q9Y234 373 aa11.92□□□□□ -0.5
AC055717.2-201ENST00000561864 SH3GLB1Q9Y371 365 aa11.92□□□□□ -0.5
AC055717.2-201ENST00000561864 TPRKBQ9Y3C4 175 aa11.92□□□□□ -0.5
AC055717.2-201ENST00000561864 SNX5Q9Y5X3 404 aa11.92□□□□□ -0.5
AC055717.2-201ENST00000561864 SPACA6W5XKT8 324 aa11.92□□□□□ -0.5
AC055717.2-201ENST00000561864 H0YGG7 62 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 H3BSA7 217 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 CASC3O15234 703 aaKnown RBP11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 SLITRK5O94991 958 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 OXSR1O95747 527 aaPredicted RBP11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 ANGPTL1O95841 491 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 HMGN2P05204 90 aaKnown RBP11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 CYP4B1P13584 511 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 JUNDP17535 347 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 CBLP22681 906 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 GGT2P36268 569 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 FEN1P39748 380 aaKnown RBP11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 LIM2P55344 173 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 ARF3P61204 181 aaPredicted RBP11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 CSNK2BP67870 215 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 ROR2Q01974 943 aaKnown RBP11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 HHEXQ03014 270 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 DUSP2Q05923 314 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 MAD2L1BPQ15013 274 aaPredicted RBP11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 GPR19Q15760 415 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 SYPL1Q16563 259 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 DUSP7Q16829 419 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 LEXMQ3ZCV2 418 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 COLEC12Q5KU26 742 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 KLHL35Q6PF15 583 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 TMEM107Q6UX40 140 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 SLC44A2Q8IWA5 706 aaPredicted RBP11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 CCDC116Q8IYX3 515 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 TAGAPQ8N103 731 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 PARP8Q8N3A8 854 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 SLC5A8Q8N695 610 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 CADM4Q8NFZ8 388 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 OR5D16Q8NGK9 328 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 PHF10Q8WUB8 498 aaKnown RBP11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 NR4A3Q92570 626 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 ELP4Q96EB1 424 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 SHDQ96IW2 340 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 HRASLS5Q96KN8 279 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 COL21A1Q96P44 957 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 MS4A4EQ96PG1 132 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 FCRL4Q96PJ5 515 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 NELL2Q99435 816 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 SEMA6CQ9H3T2 930 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 UCK1Q9HA47 277 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 ZNF556Q9HAH1 456 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 CXorf21Q9HAI6 301 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 CCNB1IP1Q9NPC3 277 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 EVA1BQ9NVM1 165 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 SCN3BQ9NY72 215 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 POMT2Q9UKY4 750 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 DAPP1Q9UN19 280 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 HCN4Q9Y3Q4 1203 aa11.91□□□□□ -0.5
AC055717.2-201ENST00000561864 PRAMEF27A3QJZ7 478 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 WASHC1A8K0Z3 465 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 METTL12A8MUP2 240 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 FAAHO00519 579 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 NOL3O60936 208 aaKnown RBP11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 AGR2O95994 175 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 CSF2P04141 144 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 NME1P15531 152 aaKnown RBP11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 ITIH1P19827 911 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 DCKP27707 260 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 MC3RP41968 323 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 LSSP48449 732 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 STARD6P59095 220 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 RPP38P78345 283 aaKnown RBP11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 PMS2P3Q13401 168 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 GAS6Q14393 721 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 PUM1Q14671 1186 aaKnown RBP eCLIP11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 LASP1Q14847 261 aaKnown RBP11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 RAB39AQ14964 217 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 UBXN2BQ14CS0 331 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 ELOCQ15369 112 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 NEDD8Q15843 81 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 ZNF750Q32MQ0 723 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms