RNA–Protein interactions for RNA: ENST00000560982.5

USP8-215, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 3

Gene USP8, Length 410 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-215ENST00000560982 PTGR2Q8N8N7 351 aaPredicted RBP12.85□□□□□ -0.35
USP8-215ENST00000560982 OR52B6Q8NGF0 335 aa12.85□□□□□ -0.35
USP8-215ENST00000560982 ATP6V1E2Q96A05 226 aa12.85□□□□□ -0.35
USP8-215ENST00000560982 CDK15Q96Q40 435 aa12.85□□□□□ -0.35
USP8-215ENST00000560982 SERPINI1Q99574 410 aa12.85□□□□□ -0.35
USP8-215ENST00000560982 DOHHQ9BU89 302 aa12.85□□□□□ -0.35
USP8-215ENST00000560982 SLC6A15Q9H2J7 730 aa12.85□□□□□ -0.35
USP8-215ENST00000560982 ACSS3Q9H6R3 686 aa12.85□□□□□ -0.35
USP8-215ENST00000560982 NOL11Q9H8H0 719 aaKnown RBP12.85□□□□□ -0.35
USP8-215ENST00000560982 SLC24A3Q9HC58 644 aa12.85□□□□□ -0.35
USP8-215ENST00000560982 QPCTLQ9NXS2 382 aa12.85□□□□□ -0.35
USP8-215ENST00000560982 B4GALT7Q9UBV7 327 aa12.85□□□□□ -0.35
USP8-215ENST00000560982 KCNN3Q9UGI6 736 aa12.85□□□□□ -0.35
USP8-215ENST00000560982 CNOT11Q9UKZ1 510 aaKnown RBP12.85□□□□□ -0.35
USP8-215ENST00000560982 ARHGAP21Q5T5U3 1957 aa12.84□□□□□ -0.35
USP8-215ENST00000560982 C2orf92A0A1B0GVN3 265 aa12.84□□□□□ -0.35
USP8-215ENST00000560982 A0A1W2PS29 197 aa12.84□□□□□ -0.35
USP8-215ENST00000560982 FAM47E-STBD1D6RA91 191 aa12.84□□□□□ -0.35
USP8-215ENST00000560982 OR7A17O14581 309 aa12.84□□□□□ -0.35
USP8-215ENST00000560982 PGRMC2O15173 223 aa12.84□□□□□ -0.35
USP8-215ENST00000560982 SEMA3DO95025 777 aa12.84□□□□□ -0.35
USP8-215ENST00000560982 PIK3R1P27986 724 aa12.84□□□□□ -0.35
USP8-215ENST00000560982 SSTR4P31391 388 aa12.84□□□□□ -0.35
USP8-215ENST00000560982 CCNG1P51959 295 aa12.84□□□□□ -0.35
USP8-215ENST00000560982 CKAP4Q07065 602 aaKnown RBP12.84□□□□□ -0.35
USP8-215ENST00000560982 MYBPHQ13203 477 aa12.84□□□□□ -0.35
USP8-215ENST00000560982 UBAP2Q5T6F2 1119 aaKnown RBP12.84□□□□□ -0.35
USP8-215ENST00000560982 CES4AQ5XG92 561 aa12.84□□□□□ -0.35
USP8-215ENST00000560982 TMEM64Q6YI46 380 aa12.84□□□□□ -0.35
USP8-215ENST00000560982 TMEM200AQ86VY9 491 aa12.84□□□□□ -0.35
USP8-215ENST00000560982 LIX1LQ8IVB5 337 aa12.84□□□□□ -0.35
USP8-215ENST00000560982 GALNT12Q8IXK2 581 aa12.84□□□□□ -0.35
USP8-215ENST00000560982 PLD6Q8N2A8 252 aaKnown RBP12.84□□□□□ -0.35
USP8-215ENST00000560982 LIX1Q8N485 282 aa12.84□□□□□ -0.35
USP8-215ENST00000560982 ZNF441Q8N8Z8 693 aa12.84□□□□□ -0.35
USP8-215ENST00000560982 NEIL3Q8TAT5 605 aa12.84□□□□□ -0.35
USP8-215ENST00000560982 DIO2Q92813 273 aa12.84□□□□□ -0.35
USP8-215ENST00000560982 PHF21BQ96EK2 531 aa12.84□□□□□ -0.35
USP8-215ENST00000560982 LRRC1Q9BTT6 524 aa12.84□□□□□ -0.35
USP8-215ENST00000560982 CXorf21Q9HAI6 301 aa12.84□□□□□ -0.35
USP8-215ENST00000560982 ACKR4Q9NPB9 350 aa12.84□□□□□ -0.35
USP8-215ENST00000560982 ZNF358Q9NW07 568 aa12.84□□□□□ -0.35
USP8-215ENST00000560982 TEX10Q9NXF1 929 aaPredicted RBP12.84□□□□□ -0.35
USP8-215ENST00000560982 NINJ2Q9NZG7 142 aa12.84□□□□□ -0.35
USP8-215ENST00000560982 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.84□□□□□ -0.35
USP8-215ENST00000560982 CAPN14A8MX76 684 aa12.83□□□□□ -0.36
USP8-215ENST00000560982 TP53I11O14683 189 aa12.83□□□□□ -0.36
USP8-215ENST00000560982 RBP1P09455 135 aa12.83□□□□□ -0.36
USP8-215ENST00000560982 GDF1P27539 372 aa12.83□□□□□ -0.36
USP8-215ENST00000560982 TRPC1P48995 793 aa12.83□□□□□ -0.36
USP8-215ENST00000560982 RIPPLY3P57055 190 aa12.83□□□□□ -0.36
USP8-215ENST00000560982 RPS6KA2Q15349 733 aa12.83□□□□□ -0.36
USP8-215ENST00000560982 SLC25A35Q3KQZ1 300 aa12.83□□□□□ -0.36
USP8-215ENST00000560982 TBCELQ5QJ74 424 aa12.83□□□□□ -0.36
USP8-215ENST00000560982 RIPPLY2Q5TAB7 128 aa12.83□□□□□ -0.36
USP8-215ENST00000560982 HLA-DQA1Q5Y7H0 255 aa12.83□□□□□ -0.36
USP8-215ENST00000560982 FRG2Q64ET8 278 aa12.83□□□□□ -0.36
USP8-215ENST00000560982 TMEM198Q66K66 360 aa12.83□□□□□ -0.36
USP8-215ENST00000560982 TTC19Q6DKK2 380 aaPredicted RBP12.83□□□□□ -0.36
USP8-215ENST00000560982 SPNS3Q6ZMD2 512 aa12.83□□□□□ -0.36
USP8-215ENST00000560982 WDR53Q7Z5U6 358 aaPredicted RBP12.83□□□□□ -0.36
USP8-215ENST00000560982 ULK2Q8IYT8 1036 aa12.83□□□□□ -0.36
USP8-215ENST00000560982 MYRIPQ8NFW9 859 aa12.83□□□□□ -0.36
USP8-215ENST00000560982 OR4K14Q8NGD5 310 aa12.83□□□□□ -0.36
USP8-215ENST00000560982 TP53INP1Q96A56 240 aa12.83□□□□□ -0.36
USP8-215ENST00000560982 ZNF597Q96LX8 424 aa12.83□□□□□ -0.36
USP8-215ENST00000560982 FRG2BQ96QU4 278 aa12.83□□□□□ -0.36
USP8-215ENST00000560982 XPR1Q9UBH6 696 aa12.83□□□□□ -0.36
USP8-215ENST00000560982 PCTPQ9UKL6 214 aa12.83□□□□□ -0.36
USP8-215ENST00000560982 TMCO1Q9UM00 188 aa12.83□□□□□ -0.36
USP8-215ENST00000560982 PCDHGB3Q9Y5G1 929 aa12.83□□□□□ -0.36
USP8-215ENST00000560982 C15orf38-AP3S2A0A0A6YYH1 394 aa12.82□□□□□ -0.36
USP8-215ENST00000560982 ANKRD33BA6NCL7 494 aa12.82□□□□□ -0.36
USP8-215ENST00000560982 STX16-NPEPL1H3BU86 382 aa12.82□□□□□ -0.36
USP8-215ENST00000560982 STX16O14662 325 aa12.82□□□□□ -0.36
USP8-215ENST00000560982 SMIM24O75264 130 aa12.82□□□□□ -0.36
USP8-215ENST00000560982 TRIM3O75382 744 aaPredicted RBP12.82□□□□□ -0.36
USP8-215ENST00000560982 ZWINTO95229 277 aa12.82□□□□□ -0.36
USP8-215ENST00000560982 KLK1P06870 262 aa12.82□□□□□ -0.36
USP8-215ENST00000560982 INHBAP08476 426 aa12.82□□□□□ -0.36
USP8-215ENST00000560982 CT62P0C5K7 136 aa12.82□□□□□ -0.36
USP8-215ENST00000560982 TMED10P49755 219 aaKnown RBP12.82□□□□□ -0.36
USP8-215ENST00000560982 DLX5P56178 289 aa12.82□□□□□ -0.36
USP8-215ENST00000560982 FBXW4P57775 412 aa12.82□□□□□ -0.36
USP8-215ENST00000560982 FUT7Q11130 342 aa12.82□□□□□ -0.36
USP8-215ENST00000560982 IFT88Q13099 833 aa12.82□□□□□ -0.36
USP8-215ENST00000560982 TRAF3Q13114 568 aa12.82□□□□□ -0.36
USP8-215ENST00000560982 C6orf163Q5TEZ5 329 aa12.82□□□□□ -0.36
USP8-215ENST00000560982 RILPQ96NA2 401 aa12.82□□□□□ -0.36
USP8-215ENST00000560982 NSUN5Q96P11 429 aaKnown RBP12.82□□□□□ -0.36
USP8-215ENST00000560982 NTMT1Q9BV86 223 aa12.82□□□□□ -0.36
USP8-215ENST00000560982 MRPL1Q9BYD6 325 aaKnown RBP12.82□□□□□ -0.36
USP8-215ENST00000560982 OR10A5Q9H207 317 aa12.82□□□□□ -0.36
USP8-215ENST00000560982 ZBTB26Q9HCK0 441 aa12.82□□□□□ -0.36
USP8-215ENST00000560982 AHSPQ9NZD4 102 aa12.82□□□□□ -0.36
USP8-215ENST00000560982 MTRF1LQ9UGC7 380 aaKnown RBP12.82□□□□□ -0.36
USP8-215ENST00000560982 ADAM29Q9UKF5 820 aa12.82□□□□□ -0.36
USP8-215ENST00000560982 L3MBTL1Q9Y468 752 aa12.82□□□□□ -0.36
USP8-215ENST00000560982 NPFFR2Q9Y5X5 522 aa12.82□□□□□ -0.36
USP8-215ENST00000560982 NINQ8N4C6 2090 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms