RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 ZNF615Q8N8J6 731 aa12.45□□□□□ -0.42
VPS18-203ENST00000558855 FAM13CQ8NE31 585 aa12.45□□□□□ -0.42
VPS18-203ENST00000558855 OR4F6Q8NGB9 312 aa12.45□□□□□ -0.42
VPS18-203ENST00000558855 RND1Q92730 232 aa12.45□□□□□ -0.42
VPS18-203ENST00000558855 NTNG2Q96CW9 530 aa12.45□□□□□ -0.42
VPS18-203ENST00000558855 RBM18Q96H35 190 aaKnown RBP12.45□□□□□ -0.42
VPS18-203ENST00000558855 SGCZQ96LD1 299 aa12.45□□□□□ -0.42
VPS18-203ENST00000558855 RUBCNLQ9H714 662 aa12.45□□□□□ -0.42
VPS18-203ENST00000558855 MS4A12Q9NXJ0 267 aa12.45□□□□□ -0.42
VPS18-203ENST00000558855 ADGRE2Q9UHX3 823 aa12.45□□□□□ -0.42
VPS18-203ENST00000558855 TRGV5A0A0B4J1U4 118 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 A8MT66 165 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 TRIM49D1C9J1S8 452 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 POC1B-GALNT4F8VUJ3 575 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 OR10H2O60403 315 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 TRIM3O75382 744 aaPredicted RBP12.44□□□□□ -0.42
VPS18-203ENST00000558855 NME6O75414 186 aaPredicted RBP12.44□□□□□ -0.42
VPS18-203ENST00000558855 URI1O94763 535 aaPredicted RBP12.44□□□□□ -0.42
VPS18-203ENST00000558855 KLK1P06870 262 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 CTAGE8P0CG41 777 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 CHN1P15882 459 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 BUD31P41223 144 aaPredicted RBP12.44□□□□□ -0.42
VPS18-203ENST00000558855 MAN2A2P49641 1150 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 MGAT2Q10469 447 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 GALNT1Q10472 559 aaPredicted RBP12.44□□□□□ -0.42
VPS18-203ENST00000558855 LTB4RQ15722 352 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 NNATQ16517 81 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 NTRK2Q16620 822 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 DCST1Q5T197 706 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 SLC22A10Q63ZE4 541 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 FRG2Q64ET8 278 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 TMEM211Q6ICI0 200 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 OR52E8Q6IFG1 317 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 FAM111BQ6SJ93 734 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 CYP20A1Q6UW02 462 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 RGS9BPQ6ZS82 235 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 CTAGE4Q8IX94 777 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 DMRTC2Q8IXT2 367 aaPredicted RBP12.44□□□□□ -0.42
VPS18-203ENST00000558855 MMGT1Q8N4V1 131 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 RELL2Q8NC24 303 aaPredicted RBP12.44□□□□□ -0.42
VPS18-203ENST00000558855 NAXEQ8NCW5 288 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 SLC22A8Q8TCC7 542 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 ZNF483Q8TF39 744 aaPredicted RBP12.44□□□□□ -0.42
VPS18-203ENST00000558855 ASB5Q8WWX0 329 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 ANP32BQ92688 251 aaKnown RBP12.44□□□□□ -0.42
VPS18-203ENST00000558855 RIT1Q92963 219 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 ADIPOR1Q96A54 375 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 FRG2BQ96QU4 278 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 NTMT1Q9BV86 223 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 MCCC2Q9HCC0 563 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 ZFP64Q9NPA5 681 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 CES1P1Q9UKY3 287 aa12.44□□□□□ -0.42
VPS18-203ENST00000558855 IQANK1A0A1B0GTG1 560 aa12.43□□□□□ -0.42
VPS18-203ENST00000558855 OR14I1A6ND48 311 aa12.43□□□□□ -0.42
VPS18-203ENST00000558855 BCKDKO14874 412 aa12.43□□□□□ -0.42
VPS18-203ENST00000558855 SUSD5O60279 629 aa12.43□□□□□ -0.42
VPS18-203ENST00000558855 SEMA3DO95025 777 aa12.43□□□□□ -0.42
VPS18-203ENST00000558855 PDYNP01213 254 aa12.43□□□□□ -0.42
VPS18-203ENST00000558855 SLC35E2P0CK97 266 aa12.43□□□□□ -0.42
VPS18-203ENST00000558855 ARL1P40616 181 aaPredicted RBP12.43□□□□□ -0.42
VPS18-203ENST00000558855 HTR6P50406 440 aa12.43□□□□□ -0.42
VPS18-203ENST00000558855 CCNG1P51959 295 aa12.43□□□□□ -0.42
VPS18-203ENST00000558855 ARFIP1P53367 373 aa12.43□□□□□ -0.42
VPS18-203ENST00000558855 KCNJ2P63252 427 aa12.43□□□□□ -0.42
VPS18-203ENST00000558855 CKAP4Q07065 602 aaKnown RBP12.43□□□□□ -0.42
VPS18-203ENST00000558855 FUT7Q11130 342 aa12.43□□□□□ -0.42
VPS18-203ENST00000558855 TBL3Q12788 808 aaKnown RBP12.43□□□□□ -0.42
VPS18-203ENST00000558855 SLC10A1Q14973 349 aa12.43□□□□□ -0.42
VPS18-203ENST00000558855 EXOSC7Q15024 291 aaKnown RBP12.43□□□□□ -0.42
VPS18-203ENST00000558855 C1orf185Q5T7R7 199 aa12.43□□□□□ -0.42
VPS18-203ENST00000558855 B3GNT6Q6ZMB0 384 aa12.43□□□□□ -0.42
VPS18-203ENST00000558855 SLC29A4Q7RTT9 530 aa12.43□□□□□ -0.42
VPS18-203ENST00000558855 COMMD6Q7Z4G1 85 aa12.43□□□□□ -0.42
VPS18-203ENST00000558855 CCDC91Q7Z6B0 441 aa12.43□□□□□ -0.42
VPS18-203ENST00000558855 CDH24Q86UP0 819 aa12.43□□□□□ -0.42
VPS18-203ENST00000558855 METTL4Q8N3J2 472 aa12.43□□□□□ -0.42
VPS18-203ENST00000558855 SLC15A4Q8N697 577 aa12.43□□□□□ -0.42
VPS18-203ENST00000558855 ART5Q96L15 291 aa12.43□□□□□ -0.42
VPS18-203ENST00000558855 JSRP1Q96MG2 331 aaPredicted RBP12.43□□□□□ -0.42
VPS18-203ENST00000558855 NXF5Q9H1B4 397 aaKnown RBP12.43□□□□□ -0.42
VPS18-203ENST00000558855 PSD3Q9NYI0 1048 aa12.43□□□□□ -0.42
VPS18-203ENST00000558855 PCNX3Q9H6A9 2034 aa12.43□□□□□ -0.42
VPS18-203ENST00000558855 VPS13CQ709C8 3753 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 CCDC189A1A4V9 331 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 FOXO6A8MYZ6 492 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 B4DXG7 233 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 STX16-NPEPL1H3BU86 382 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 STX16O14662 325 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 OR4F21O95013 312 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 GPX3P22352 226 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 TLX1P31314 330 aaPredicted RBP12.42□□□□□ -0.42
VPS18-203ENST00000558855 GALNSP34059 522 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 PHBP35232 272 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 PTGDSP41222 190 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 GGTA1PQ4G0N0 100 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 KLC3Q6P597 504 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 POMZP3Q6PJE2 187 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 PAOXQ6QHF9 649 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 GALNT12Q8IXK2 581 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 ULK2Q8IYT8 1036 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms