RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 ZNF311Q5JNZ3 666 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 ATAT1Q5SQI0 421 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 HENMT1Q5T8I9 393 aaKnown RBP4.85□□□□□ -1.63
TMEM260-210ENST00000556422 IRAK1BP1Q5VVH5 260 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 NANOGP8Q6NSW7 305 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 PRMT9Q6P2P2 845 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 DET1Q7L5Y6 550 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 SZRD1Q7Z422 152 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 GRASPQ7Z6J2 395 aaPredicted RBP4.85□□□□□ -1.63
TMEM260-210ENST00000556422 DHFR2Q86XF0 187 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 PTRH1Q86Y79 214 aaKnown RBP4.85□□□□□ -1.63
TMEM260-210ENST00000556422 MARVELD2Q8N4S9 558 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 OR2T34Q8NGX1 318 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 OR2T3Q8NH03 318 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 PTP4A1Q93096 173 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 MUL1Q969V5 352 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 GAL3ST4Q96RP7 486 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 ZNF251Q9BRH9 671 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 PDCD10Q9BUL8 212 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 GTPBP2Q9BX10 602 aaKnown RBP4.85□□□□□ -1.63
TMEM260-210ENST00000556422 SLC19A3Q9BZV2 496 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 TOR3AQ9H497 397 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 ALG2Q9H553 416 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 DDX31Q9H8H2 851 aaKnown RBP4.85□□□□□ -1.63
TMEM260-210ENST00000556422 NANOGQ9H9S0 305 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 SRA1Q9HD15 236 aaKnown RBP4.85□□□□□ -1.63
TMEM260-210ENST00000556422 GSN-AS1Q9NRJ2 163 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 SDHAF2Q9NX18 166 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 RAB23Q9ULC3 237 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 SRPK3Q9UPE1 567 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 BAIAP2Q9UQB8 552 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 POLR3HQ9Y535 204 aaPredicted RBP4.85□□□□□ -1.63
TMEM260-210ENST00000556422 MAU2Q9Y6X3 613 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 SPEGQ15772 3267 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 KCNE1BA0A087WTH5 132 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 TCRBV5S2A0A599 114 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 FAM234BA2RU67 622 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 OTOL1A6NHN0 477 aaPredicted RBP4.85□□□□□ -1.63
TMEM260-210ENST00000556422 WASHC1A8K0Z3 465 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 LOC730098B7Z3J9 87 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 C5orf67F2Z3F1 127 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 H7C2Y5 167 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 GIPC1O14908 333 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 ARPC2O15144 300 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 GSTA4O15217 222 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 AP1G1O43747 822 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 PPM1BO75688 479 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 CISD3P0C7P0 127 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 CBSLP0DN79 551 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 LCN1P31025 176 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 CBSP35520 551 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 SLC6A12P48065 614 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 GSK3BP49841 420 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 NR1H2P55055 460 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 KCNK10P57789 538 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 DCDC1P59894 354 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 HMGCS1Q01581 520 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 TGM3Q08188 693 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 SELPLGQ14242 412 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 KCNAB1Q14722 419 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 PDK3Q15120 406 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 RPS6KA2Q15349 733 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 NR6A1Q15406 480 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 AP5B1Q2VPB7 878 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 PGS1Q32NB8 556 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 PYCR3Q53H96 274 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 TIGD3Q6B0B8 471 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 WASH2PQ6VEQ5 465 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 Q6ZVL8 140 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 ERMP1Q7Z2K6 904 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 FAM122BQ7Z309 247 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 TRIM46Q7Z4K8 759 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 CYP4Z1Q86W10 505 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 AHI1Q8N157 1196 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 BEND7Q8N7W2 519 aaPredicted RBP4.85□□□□□ -1.63
TMEM260-210ENST00000556422 OR2L3Q8NG85 312 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 ITFG1Q8TB96 612 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 ASB11Q8WXH4 323 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 REPS1Q96D71 796 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 TMEM80Q96HE8 168 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 MAGEB10Q96LZ2 347 aaPredicted RBP4.85□□□□□ -1.63
TMEM260-210ENST00000556422 SPXQ9BT56 116 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 SF3B5Q9BWJ5 86 aaKnown RBP4.85□□□□□ -1.63
TMEM260-210ENST00000556422 SLC2A11Q9BYW1 496 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 ASCL3Q9NQ33 180 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 CCM2LQ9NUG4 571 aaPredicted RBP4.85□□□□□ -1.63
TMEM260-210ENST00000556422 RIC8BQ9NVN3 520 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 SMPD3Q9NY59 655 aaPredicted RBP4.85□□□□□ -1.63
TMEM260-210ENST00000556422 OPTCQ9UBM4 332 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 GULP1Q9UBP9 304 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 ZNF221Q9UK13 617 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 AP4B1Q9Y6B7 739 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 CCDC154A6NI56 674 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 CBY3A6NI87 242 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 H7BY64 318 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 GFYI3L273 518 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 DLGAP1O14490 977 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 AKAP8O43823 692 aaKnown RBP4.84□□□□□ -1.63
TMEM260-210ENST00000556422 TLL1O43897 1013 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 GPX5O75715 221 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms