RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 MAB21L2Q9Y586 359 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 PCM1Q15154 2024 aa7.39□□□□□ -1.23
CHD8-209ENST00000555935 ALPK3Q96L96 1907 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 A0A0U1RQF3 1178 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 PRODHO43272 600 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 AKAP8O43823 692 aaKnown RBP7.38□□□□□ -1.23
CHD8-209ENST00000555935 ALDH1A1P00352 501 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 IGFBP1P08833 259 aaPredicted RBP7.38□□□□□ -1.23
CHD8-209ENST00000555935 CHRM5P08912 532 aaPredicted RBP7.38□□□□□ -1.23
CHD8-209ENST00000555935 PRKACAP17612 351 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 C4BPBP20851 252 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 EPHA4P54764 986 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 RAG2P55895 527 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 CTBP2P56545 445 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 DSTNP60981 165 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 ZNF763Q0D2J5 394 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 PUM1Q14671 1186 aaKnown RBP eCLIP7.38□□□□□ -1.23
CHD8-209ENST00000555935 CCDC85BQ15834 202 aaPredicted RBP7.38□□□□□ -1.23
CHD8-209ENST00000555935 ZNF385BQ569K4 471 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 OR2G6Q5TZ20 316 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 REEP3Q6NUK4 255 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 BCDIN3DQ7Z5W3 292 aaKnown RBP7.38□□□□□ -1.23
CHD8-209ENST00000555935 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.38□□□□□ -1.23
CHD8-209ENST00000555935 GPC2Q8N158 579 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 LINC00471Q8N535 108 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 ARIH2OSQ8N7S6 290 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 OR11H4Q8NGC9 324 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 OR10Z1Q8NGY1 313 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 NEIL3Q8TAT5 605 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 SKA2Q8WVK7 121 aaPredicted RBP7.38□□□□□ -1.23
CHD8-209ENST00000555935 SMG7Q92540 1137 aaKnown RBP7.38□□□□□ -1.23
CHD8-209ENST00000555935 ABCG5Q9H222 651 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 DPAGT1Q9H3H5 408 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 ERVMER34-1Q9H9K5 563 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 NMRK2Q9NPI5 230 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 COPZ2Q9P299 210 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 EXTL2Q9UBQ6 330 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 GLS2Q9UI32 602 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 CBLCQ9ULV8 474 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 MAP4K5Q9Y4K4 846 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 TTC3P53804 2025 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 PLXNA4Q9HCM2 1894 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 MEIKINA0A087WXM9 373 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 A0A1W2PRG6 482 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 F8W810 466 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 CASC3O15234 703 aaKnown RBP7.38□□□□□ -1.23
CHD8-209ENST00000555935 CHST10O43529 356 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 CELF2O95319 508 aaKnown RBP7.38□□□□□ -1.23
CHD8-209ENST00000555935 RBMS1P29558 406 aaKnown RBP7.38□□□□□ -1.23
CHD8-209ENST00000555935 ZNF81P51508 661 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 PNLIPRP1P54315 467 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 CASP9P55211 416 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 EFNB1P98172 346 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 CSTF1Q05048 431 aaKnown RBP7.38□□□□□ -1.23
CHD8-209ENST00000555935 PDE7AQ13946 482 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 DOC2AQ14183 400 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 MRPL58Q14197 206 aaKnown RBP7.38□□□□□ -1.23
CHD8-209ENST00000555935 LRRC32Q14392 662 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 SF1Q15637 639 aaKnown RBP7.38□□□□□ -1.23
CHD8-209ENST00000555935 CDKN3Q16667 212 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 LGALSLQ3ZCW2 172 aaPredicted RBP7.38□□□□□ -1.23
CHD8-209ENST00000555935 MINDY4Q4G0A6 757 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 PLEKHS1Q5SXH7 462 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 TMEM81Q6P7N7 255 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 UNC5DQ6UXZ4 953 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 LINGO4Q6UY18 593 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 TPGS1Q6ZTW0 290 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 IKBIPQ70UQ0 350 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 LRRC28Q86X40 367 aaPredicted RBP7.38□□□□□ -1.23
CHD8-209ENST00000555935 MARCH9Q86YJ5 346 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 SRFBP1Q8NEF9 429 aaKnown RBP7.38□□□□□ -1.23
CHD8-209ENST00000555935 OR4K1Q8NGD4 311 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 GATAD2BQ8WXI9 593 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 FGF11Q92914 225 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 CLP1Q92989 425 aaKnown RBP7.38□□□□□ -1.23
CHD8-209ENST00000555935 PPCDCQ96CD2 204 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 RNFT2Q96EX2 444 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 RBP7Q96R05 134 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 THAP7Q9BT49 309 aaPredicted RBP7.38□□□□□ -1.23
CHD8-209ENST00000555935 NLNQ9BYT8 704 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.38□□□□□ -1.23
CHD8-209ENST00000555935 SGK2Q9HBY8 427 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 CYSLTR2Q9NS75 346 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 ASB6Q9NWX5 421 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 TMEM161AQ9NX61 479 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 RDH8Q9NYR8 311 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 SCP2D1Q9UJQ7 156 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 EXO1Q9UQ84 846 aaKnown RBP7.38□□□□□ -1.23
CHD8-209ENST00000555935 CACNG2Q9Y698 323 aa7.38□□□□□ -1.23
CHD8-209ENST00000555935 DNMT3AQ9Y6K1 912 aaPredicted RBP7.38□□□□□ -1.23
CHD8-209ENST00000555935 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.37□□□□□ -1.23
CHD8-209ENST00000555935 A0A1W2PPL8 197 aa7.37□□□□□ -1.23
CHD8-209ENST00000555935 MTMR11A4FU01 709 aa7.37□□□□□ -1.23
CHD8-209ENST00000555935 TMEM189-UBE2V1I3L0A0 370 aa7.37□□□□□ -1.23
CHD8-209ENST00000555935 GTPBP1O00178 669 aaKnown RBP7.37□□□□□ -1.23
CHD8-209ENST00000555935 GABRPO00591 440 aa7.37□□□□□ -1.23
CHD8-209ENST00000555935 NDUFA2O43678 99 aa7.37□□□□□ -1.23
CHD8-209ENST00000555935 PPM1BO75688 479 aa7.37□□□□□ -1.23
CHD8-209ENST00000555935 SNAPC5O75971 98 aa7.37□□□□□ -1.23
CHD8-209ENST00000555935 CLDN7O95471 211 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms