RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 PADI2Q9Y2J8 665 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 L3MBTL1Q9Y468 752 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 PCDHB14Q9Y5E9 798 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 SDK2Q58EX2 2172 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 IGKV3D-11A0A0A0MRZ8 115 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 MYOCOSA0A1B0GUC4 107 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 A0A1W2PS29 197 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 CDRT15L2A8MXV6 281 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 EVPLLA8MZ36 301 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 IDSB3KWA1 339 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 TGFBR3LH3BV60 316 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 FXYD1O00168 92 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 RAD1O60671 282 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 RECKO95980 971 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 RAB40ALP0C0E4 278 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 TNNI3P19429 210 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 PPIBP23284 216 aaKnown RBP10.33□□□□□ -0.76
TMEM260-208ENST00000555905 PTPN6P29350 595 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 GALNSP34059 522 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 STT3AP46977 705 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 CDK9P50750 372 aaKnown RBP10.33□□□□□ -0.76
TMEM260-208ENST00000555905 RPS15P62841 145 aaKnown RBP10.33□□□□□ -0.76
TMEM260-208ENST00000555905 PRR5P85299 388 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 DUSP2Q05923 314 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 FOXC1Q12948 553 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 CPZQ66K79 652 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 BHLHB9Q6PI77 547 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 TMEM107Q6UX40 140 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 TMEM64Q6YI46 380 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 BNC2Q6ZN30 1099 aaPredicted RBP10.33□□□□□ -0.76
TMEM260-208ENST00000555905 TIPARPQ7Z3E1 657 aaKnown RBP10.33□□□□□ -0.76
TMEM260-208ENST00000555905 ENDOVQ8N8Q3 282 aaKnown RBP10.33□□□□□ -0.76
TMEM260-208ENST00000555905 ADCY4Q8NFM4 1077 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 OR8J3Q8NGG0 315 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 SFXN5Q8TD22 340 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 CT55Q8WUE5 264 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 RIT1Q92963 219 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 MCUR1Q96AQ8 359 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 PPWD1Q96BP3 646 aaKnown RBP10.33□□□□□ -0.76
TMEM260-208ENST00000555905 ANKRD27Q96NW4 1050 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 SPSB2Q99619 263 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 SLC35A5Q9BS91 424 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 CRB3Q9BUF7 120 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 FAM117AQ9C073 453 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 C3orf14Q9HBI5 128 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 PNO1Q9NRX1 252 aaKnown RBP10.33□□□□□ -0.76
TMEM260-208ENST00000555905 THSD1Q9NS62 852 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 SLC6A13Q9NSD5 602 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 SLC25A37Q9NYZ2 338 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 VAPAQ9P0L0 249 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 PTGFRNQ9P2B2 879 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 CORO2BQ9UQ03 480 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 AP3M1Q9Y2T2 418 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 PTRH2Q9Y3E5 179 aaKnown RBP10.33□□□□□ -0.76
TMEM260-208ENST00000555905 AK5Q9Y6K8 562 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 NUP214P35658 2090 aaPredicted RBP10.33□□□□□ -0.76
TMEM260-208ENST00000555905 CCDC88CQ9P219 2028 aa10.33□□□□□ -0.76
TMEM260-208ENST00000555905 CFAP54Q96N23 3096 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 TRBV5-3A0A0A0MS03 114 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 RNF103-CHMP3A0A140T963 221 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 TCRBV16S1A1N1A0A5B0 115 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 C17orf105B2RV13 164 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 C21orf140B9A014 251 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 C3orf80F5H4A9 247 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 CLIC1O00299 241 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 PLOD2O00469 737 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 PCDH17O14917 1159 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 EMC8O43402 210 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 CNOT3O75175 753 aaKnown RBP10.32□□□□□ -0.76
TMEM260-208ENST00000555905 ALOX12BO75342 701 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 DNAJC8O75937 253 aaPredicted RBP10.32□□□□□ -0.76
TMEM260-208ENST00000555905 DXOO77932 396 aaKnown RBP10.32□□□□□ -0.76
TMEM260-208ENST00000555905 KRT75O95678 551 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 IGHEP01854 428 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 HOXB9P17482 250 aaPredicted RBP10.32□□□□□ -0.76
TMEM260-208ENST00000555905 TCN2P20062 427 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 PLA2G5P39877 138 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 FOLR3P41439 243 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 MC3RP41968 323 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 STAT5AP42229 794 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 CCT3P49368 545 aaKnown RBP10.32□□□□□ -0.76
TMEM260-208ENST00000555905 OR4D2P58180 307 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 GAB1Q13480 694 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 RTP5Q14D33 572 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 ELAVL1Q15717 326 aaKnown RBP10.32□□□□□ -0.76
TMEM260-208ENST00000555905 LTB4RQ15722 352 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 PRICKLE4Q2TBC4 344 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 GTDC1Q4AE62 458 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 RUNDC3AQ59EK9 446 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 ZNF628Q5EBL2 1059 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 FAAH2Q6GMR7 532 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 NANOGP8Q6NSW7 305 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 C8orf82Q6P1X6 216 aaPredicted RBP10.32□□□□□ -0.76
TMEM260-208ENST00000555905 ANGPTL8Q6UXH0 198 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 SZRD1Q7Z422 152 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 PACS2Q86VP3 889 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 GALNT12Q8IXK2 581 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 MSRB3Q8IXL7 192 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 ARHGAP24Q8N264 748 aa10.32□□□□□ -0.76
TMEM260-208ENST00000555905 OR56A1Q8NGH5 318 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms