RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 LIX1Q8N485 282 aa8.27□□□□□ -1.09
PRKCH-218ENST00000555628 SLC15A4Q8N697 577 aa8.27□□□□□ -1.09
PRKCH-218ENST00000555628 OR5L2Q8NGL0 311 aa8.27□□□□□ -1.09
PRKCH-218ENST00000555628 ZPLD1Q8TCW7 415 aa8.27□□□□□ -1.09
PRKCH-218ENST00000555628 CTHRC1Q96CG8 243 aa8.27□□□□□ -1.09
PRKCH-218ENST00000555628 ZFP3Q96NJ6 502 aa8.27□□□□□ -1.09
PRKCH-218ENST00000555628 WFIKKN1Q96NZ8 548 aa8.27□□□□□ -1.09
PRKCH-218ENST00000555628 TRIB1Q96RU8 372 aa8.27□□□□□ -1.09
PRKCH-218ENST00000555628 ALOXE3Q9BYJ1 711 aa8.27□□□□□ -1.09
PRKCH-218ENST00000555628 UBTD1Q9HAC8 227 aa8.27□□□□□ -1.09
PRKCH-218ENST00000555628 RNF112Q9ULX5 631 aa8.27□□□□□ -1.09
PRKCH-218ENST00000555628 EIF3LQ9Y262 564 aaKnown RBP8.27□□□□□ -1.09
PRKCH-218ENST00000555628 DTX4Q9Y2E6 619 aa8.27□□□□□ -1.09
PRKCH-218ENST00000555628 SLC6A5Q9Y345 797 aa8.27□□□□□ -1.09
PRKCH-218ENST00000555628 TGP01266 2768 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 CES2O00748 559 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 ERI3O43414 337 aaKnown RBP8.26□□□□□ -1.09
PRKCH-218ENST00000555628 PRAMEF4O60810 478 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 LDB3O75112 727 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 ERN1O75460 977 aaKnown RBP8.26□□□□□ -1.09
PRKCH-218ENST00000555628 SCELO95171 688 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 CPN1P15169 458 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 GDF1P27539 372 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 PGGT1BP53609 377 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 STXBP1P61764 594 aaKnown RBP8.26□□□□□ -1.09
PRKCH-218ENST00000555628 CSHL1Q14406 222 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 EIPR1Q53HC9 387 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 RBM20Q5T481 1227 aaKnown RBP8.26□□□□□ -1.09
PRKCH-218ENST00000555628 PRAMEF9Q5VWM5 478 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 ANKRD22Q5VYY1 191 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 ABHD17CQ6PCB6 329 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 PLXDC2Q6UX71 529 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 ZNF793Q6ZN11 406 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 PEX26Q7Z412 305 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 TMPRSS11BQ86T26 416 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 TBC1D19Q8N5T2 526 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 UBL4BQ8N7F7 174 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 MAPK1IP1LQ8NDC0 245 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 LINGO1Q96FE5 620 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 SENP5Q96HI0 755 aaPredicted RBP8.26□□□□□ -1.09
PRKCH-218ENST00000555628 FBXL20Q96IG2 436 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 ZNF597Q96LX8 424 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 SECISBP2Q96T21 854 aaKnown RBP8.26□□□□□ -1.09
PRKCH-218ENST00000555628 NDNQ99608 321 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 TUBA1CQ9BQE3 449 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 AIF1LQ9BQI0 150 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 DOHHQ9BU89 302 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 PRDM7Q9NQW5 492 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 ARL15Q9NXU5 204 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 TRMT6Q9UJA5 497 aaKnown RBP8.26□□□□□ -1.09
PRKCH-218ENST00000555628 FBXO5Q9UKT4 447 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 CAMK2AQ9UQM7 478 aa8.26□□□□□ -1.09
PRKCH-218ENST00000555628 A0A096LNT2 108 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 CTAGE9A4FU28 777 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 LRRC14BA6NHZ5 514 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 GOLGA6L22H0YM25 854 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 CBFA2T2O43439 604 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 HCRTR2O43614 444 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 B3GALT2O43825 422 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 CD5LO43866 347 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 FGF17O60258 216 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 IFNA16P05015 189 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 TPM1P09493 284 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 GSTM2P28161 218 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 PTPN6P29350 595 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 STT3AP46977 705 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 BASP1P80723 227 aaKnown RBP8.25□□□□□ -1.09
PRKCH-218ENST00000555628 FAM27E3Q08E93 113 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 SNX1Q13596 522 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 SERTAD2Q14140 314 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 DHX34Q14147 1143 aaKnown RBP8.25□□□□□ -1.09
PRKCH-218ENST00000555628 EFTUD2Q15029 972 aaKnown RBP eCLIP8.25□□□□□ -1.09
PRKCH-218ENST00000555628 EBPQ15125 230 aaKnown RBP8.25□□□□□ -1.09
PRKCH-218ENST00000555628 SPA17Q15506 151 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 ZNF474Q6S9Z5 364 aaPredicted RBP8.25□□□□□ -1.09
PRKCH-218ENST00000555628 RAD9BQ6WBX8 426 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 THOC6Q86W42 341 aaKnown RBP8.25□□□□□ -1.09
PRKCH-218ENST00000555628 GCNT2Q8N0V5 402 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 CCDC89Q8N998 374 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 C2CD4AQ8NCU7 369 aaPredicted RBP8.25□□□□□ -1.09
PRKCH-218ENST00000555628 OR2L5Q8NG80 312 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 SLC22A8Q8TCC7 542 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 FBLIM1Q8WUP2 373 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 ZNF669Q96BR6 464 aaPredicted RBP8.25□□□□□ -1.09
PRKCH-218ENST00000555628 PIK3IP1Q96FE7 263 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 WDR89Q96FK6 387 aaPredicted RBP8.25□□□□□ -1.09
PRKCH-218ENST00000555628 RILPQ96NA2 401 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 GNRHR2Q96P88 292 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 SERINC2Q96SA4 455 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 ANGPTL4Q9BY76 406 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 WWTR1Q9GZV5 400 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 PIGMQ9H3S5 423 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 LYRM4Q9HD34 91 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 HOMER3Q9NSC5 361 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 KLHL28Q9NXS3 571 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 PACSIN3Q9UKS6 424 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 MRPS33Q9Y291 106 aaKnown RBP8.25□□□□□ -1.09
PRKCH-218ENST00000555628 EPN1Q9Y6I3 576 aaPredicted RBP8.25□□□□□ -1.09
PRKCH-218ENST00000555628 CAPN6Q9Y6Q1 641 aa8.25□□□□□ -1.09
PRKCH-218ENST00000555628 YLPM1P49750 1951 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms