RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 CCDC157Q569K6 752 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 SGO1Q5FBB7 561 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 PAGE2BQ5JRK9 111 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 MED27Q6P2C8 311 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 SCIMPQ6UWF3 145 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 TMIGD1Q6UXZ0 262 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 RNF44Q7L0R7 432 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 ARHGAP22Q7Z5H3 698 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 VN1R4Q7Z5H5 301 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 ADCK2Q7Z695 626 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 MYLK4Q86YV6 388 aaPredicted RBP5.97□□□□□ -1.45
SCFD1-212ENST00000554486 CRLF3Q8IUI8 442 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.97□□□□□ -1.45
SCFD1-212ENST00000554486 LAS2Q8IYD9 372 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 CLYBLQ8N0X4 340 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 KRT78Q8N1N4 520 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 DNAJC22Q8N4W6 341 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 FITM2Q8N6M3 262 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 MFSD9Q8NBP5 474 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 NLGN4YQ8NFZ3 816 aaPredicted RBP5.97□□□□□ -1.45
SCFD1-212ENST00000554486 OR7G3Q8NG95 312 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 RFWD2Q8NHY2 731 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 METTL6Q8TCB7 284 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 CREB3L4Q8TEY5 395 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 TWIST2Q8WVJ9 160 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 THOC1Q96FV9 657 aaKnown RBP5.97□□□□□ -1.45
SCFD1-212ENST00000554486 CHMP6Q96FZ7 201 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 SLC41A2Q96JW4 573 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 GFM1Q96RP9 751 aaKnown RBP5.97□□□□□ -1.45
SCFD1-212ENST00000554486 VKORC1Q9BQB6 163 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 AICDAQ9GZX7 198 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 CHRNA10Q9GZZ6 450 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 RHBGQ9H310 441 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 ZNF703Q9H7S9 590 aaPredicted RBP5.97□□□□□ -1.45
SCFD1-212ENST00000554486 MRPS18AQ9NVS2 196 aaKnown RBP5.97□□□□□ -1.45
SCFD1-212ENST00000554486 SNX6Q9UNH7 406 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 BTRCQ9Y297 605 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 FIS1Q9Y3D6 152 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 PCDHGA1Q9Y5H4 931 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 DNAJC15Q9Y5T4 150 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 SPTBN4Q9H254 2564 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 FER1L5A0AVI2 2057 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 PTPRBP23467 1997 aa5.97□□□□□ -1.45
SCFD1-212ENST00000554486 SPTBN2O15020 2390 aa5.96□□□□□ -1.45
SCFD1-212ENST00000554486 LOC105369274A0A096LPK9 316 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 LOC102723532A0A0G2JNH3 316 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 A0A0J9YVX5 310 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 SRRM3A6NNA2 597 aaPredicted RBP5.96□□□□□ -1.46
SCFD1-212ENST00000554486 MAGEB17A8MXT2 336 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 H0YGG7 62 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 FOXE1O00358 373 aaPredicted RBP5.96□□□□□ -1.46
SCFD1-212ENST00000554486 SDHDO14521 159 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 PIP5K1BO14986 540 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 HDAC3O15379 428 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 TOX3O15405 576 aaPredicted RBP5.96□□□□□ -1.46
SCFD1-212ENST00000554486 P2RX6O15547 441 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 OR1F1O43749 312 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 SKAP2O75563 359 aaPredicted RBP5.96□□□□□ -1.46
SCFD1-212ENST00000554486 RASSF9O75901 435 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 TGDSO95455 350 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 ETHE1O95571 254 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 PDYNP01213 254 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 KRT6AP02538 564 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 STATHP02808 62 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 KRT6BP04259 564 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 LINC00032P0C843 101 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 PCNAP12004 261 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 FOLR1P15328 257 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 NELFEP18615 380 aaKnown RBP5.96□□□□□ -1.46
SCFD1-212ENST00000554486 CXCR2P25025 360 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 AHRP35869 848 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 PIK3CBP42338 1070 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 KRT6CP48668 564 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 ARFIP2P53365 341 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 INHBCP55103 352 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 ARF3P61204 181 aaPredicted RBP5.96□□□□□ -1.46
SCFD1-212ENST00000554486 RPS15AP62244 130 aaKnown RBP5.96□□□□□ -1.46
SCFD1-212ENST00000554486 CYP4F2P78329 520 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 E2F1Q01094 437 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 SF3A3Q12874 501 aaKnown RBP eCLIP5.96□□□□□ -1.46
SCFD1-212ENST00000554486 IFT88Q13099 833 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 C16orf72Q14CZ0 275 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 ABRAXAS2Q15018 415 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 RBBP5Q15291 538 aaKnown RBP5.96□□□□□ -1.46
SCFD1-212ENST00000554486 PDCD2Q16342 344 aaPredicted RBP5.96□□□□□ -1.46
SCFD1-212ENST00000554486 HIST2H2ACQ16777 129 aaPredicted RBP5.96□□□□□ -1.46
SCFD1-212ENST00000554486 DEFB110Q30KQ9 67 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 TUBB8Q3ZCM7 444 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 XKR7Q5GH72 579 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 RABL3Q5HYI8 236 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 VWA5B1Q5TIE3 1220 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 FRG2Q64ET8 278 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 HIST2H2AA3Q6FI13 130 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 FRMPD2BQ6IN97 320 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 DHRS13Q6UX07 377 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 RBM44Q6ZP01 1051 aaKnown RBP5.96□□□□□ -1.46
SCFD1-212ENST00000554486 RNF165Q6ZSG1 346 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 DGLUCYQ7Z3D6 616 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 KMT5CQ86Y97 462 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 KIRREL3Q8IZU9 778 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms