RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 SLITRK5O94991 958 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 SEMG1P04279 462 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 EFNA1P20827 205 aaPredicted RBP6.3□□□□□ -1.4
LINC00517-202ENST00000554257 SDHBP21912 280 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 BUD31P41223 144 aaPredicted RBP6.3□□□□□ -1.4
LINC00517-202ENST00000554257 CPA2P48052 419 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 SLC37A1P57057 533 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 LRRC74AQ0VAA2 488 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 CLN3Q13286 438 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 MYBPC3Q14896 1274 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 TBC1D25Q3MII6 688 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 LYPD8Q6UX82 237 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 NPSR1Q6W5P4 371 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 PTRH1Q86Y79 214 aaKnown RBP6.3□□□□□ -1.4
LINC00517-202ENST00000554257 GPR135Q8IZ08 494 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 ST13P4Q8IZP2 240 aaPredicted RBP6.3□□□□□ -1.4
LINC00517-202ENST00000554257 LRRC25Q8N386 305 aaPredicted RBP6.3□□□□□ -1.4
LINC00517-202ENST00000554257 OR4K14Q8NGD5 310 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 OR2Y1Q8NGV0 311 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 CGREF1Q99674 301 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 CENPKQ9BS16 269 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 COPS7BQ9H9Q2 264 aaPredicted RBP6.3□□□□□ -1.4
LINC00517-202ENST00000554257 TAS2R9Q9NYW1 312 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 C19orf53Q9UNZ5 99 aaPredicted RBP6.3□□□□□ -1.4
LINC00517-202ENST00000554257 EP300Q09472 2414 aaPredicted RBP6.3□□□□□ -1.4
LINC00517-202ENST00000554257 ACOT8O14734 319 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 ERN1O75460 977 aaKnown RBP6.3□□□□□ -1.4
LINC00517-202ENST00000554257 GUSBP08236 651 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 C8orf89P0DMQ9 161 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 S100A3P33764 101 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 ARL4DP49703 201 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 SLC25A3Q00325 362 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 CEACAM7Q14002 265 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 TRMT12Q53H54 448 aaKnown RBP6.3□□□□□ -1.4
LINC00517-202ENST00000554257 H3F3CQ6NXT2 135 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 C9orf40Q8IXQ3 194 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 EFCAB3Q8N7B9 438 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 EXOSC8Q96B26 276 aaKnown RBP6.3□□□□□ -1.4
LINC00517-202ENST00000554257 NAF1Q96HR8 494 aaKnown RBP6.3□□□□□ -1.4
LINC00517-202ENST00000554257 VSTM2LQ96N03 204 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 FAIM2Q9BWQ8 316 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 KCND3Q9UK17 655 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 CDC14AQ9UNH5 594 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 A0A1W2PRB8 838 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 PRORSD1PA6NEY8 169 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 MRASO14807 208 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 DNAJC8O75937 253 aaPredicted RBP6.3□□□□□ -1.4
LINC00517-202ENST00000554257 NADKO95544 446 aaPredicted RBP6.3□□□□□ -1.4
LINC00517-202ENST00000554257 PORP16435 677 aaPredicted RBP6.3□□□□□ -1.4
LINC00517-202ENST00000554257 CSNK2A2P19784 350 aaPredicted RBP6.3□□□□□ -1.4
LINC00517-202ENST00000554257 PTPN4P29074 926 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 XKP51811 444 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 KCNK10P57789 538 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 BIKQ13323 160 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 MAPRE2Q15555 327 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 ZSCAN26Q16670 478 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 PGS1Q32NB8 556 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 ARHGAP40Q5TG30 622 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 ANXA8L1Q5VT79 327 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 DHDDSQ86SQ9 333 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 LGI4Q8N135 537 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 ENDOVQ8N8Q3 282 aaKnown RBP6.3□□□□□ -1.4
LINC00517-202ENST00000554257 ELP5Q8TE02 316 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 APOBEC4Q8WW27 367 aaKnown RBP6.3□□□□□ -1.4
LINC00517-202ENST00000554257 KLHL29Q96CT2 875 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 AURKBQ96GD4 344 aaPredicted RBP6.3□□□□□ -1.4
LINC00517-202ENST00000554257 ITCHQ96J02 903 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 BTBD10Q9BSF8 475 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 PRTFDC1Q9NRG1 225 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 PTGFRNQ9P2B2 879 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 CROTQ9UKG9 612 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 MSRB2Q9Y3D2 182 aa6.3□□□□□ -1.4
LINC00517-202ENST00000554257 MRPS18BQ9Y676 258 aaKnown RBP6.3□□□□□ -1.4
LINC00517-202ENST00000554257 LOC100653049A0A140TA62 436 aa6.29□□□□□ -1.4
LINC00517-202ENST00000554257 MYOCOSA0A1B0GUC4 107 aa6.29□□□□□ -1.4
LINC00517-202ENST00000554257 SAGE2PA6NJ88 616 aa6.29□□□□□ -1.4
LINC00517-202ENST00000554257 IDSB3KWA1 339 aa6.29□□□□□ -1.4
LINC00517-202ENST00000554257 B4DXG7 233 aa6.29□□□□□ -1.4
LINC00517-202ENST00000554257 C21orf140B9A014 251 aa6.29□□□□□ -1.4
LINC00517-202ENST00000554257 AGRPO00253 132 aa6.29□□□□□ -1.4
LINC00517-202ENST00000554257 HMGN4O00479 90 aa6.29□□□□□ -1.4
LINC00517-202ENST00000554257 GSC2O15499 205 aa6.29□□□□□ -1.4
LINC00517-202ENST00000554257 GUCY1B2O75343 617 aa6.29□□□□□ -1.4
LINC00517-202ENST00000554257 CDC123O75794 336 aaPredicted RBP6.29□□□□□ -1.4
LINC00517-202ENST00000554257 KRT34O76011 436 aa6.29□□□□□ -1.4
LINC00517-202ENST00000554257 ACP2P11117 423 aa6.29□□□□□ -1.4
LINC00517-202ENST00000554257 HSD17B1P14061 328 aa6.29□□□□□ -1.4
LINC00517-202ENST00000554257 RPS4Y1P22090 263 aaKnown RBP6.29□□□□□ -1.4
LINC00517-202ENST00000554257 UQCRC2P22695 453 aa6.29□□□□□ -1.4
LINC00517-202ENST00000554257 FEN1P39748 380 aaKnown RBP6.29□□□□□ -1.4
LINC00517-202ENST00000554257 MC3RP41968 323 aa6.29□□□□□ -1.4
LINC00517-202ENST00000554257 MAPK10P53779 464 aa6.29□□□□□ -1.4
LINC00517-202ENST00000554257 PCBP3P57721 371 aaKnown RBP6.29□□□□□ -1.4
LINC00517-202ENST00000554257 STX1BP61266 288 aa6.29□□□□□ -1.4
LINC00517-202ENST00000554257 ID2Q02363 134 aa6.29□□□□□ -1.4
LINC00517-202ENST00000554257 CAPRIN1Q14444 709 aaKnown RBP6.29□□□□□ -1.4
LINC00517-202ENST00000554257 KIRREL2Q6UWL6 708 aa6.29□□□□□ -1.4
LINC00517-202ENST00000554257 ZZZ3Q8IYH5 903 aa6.29□□□□□ -1.4
LINC00517-202ENST00000554257 CCDC116Q8IYX3 515 aa6.29□□□□□ -1.4
LINC00517-202ENST00000554257 NLGN4XQ8N0W4 816 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms