RNA–Protein interactions for RNA: ENST00000553368.1

APEX1-204, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-204ENST00000553368 PSD3Q9NYI0 1048 aa13.79□□□□□ -0.2
APEX1-204ENST00000553368 MTRF1LQ9UGC7 380 aaKnown RBP13.79□□□□□ -0.2
APEX1-204ENST00000553368 RPH3AQ9Y2J0 694 aaPredicted RBP13.79□□□□□ -0.2
APEX1-204ENST00000553368 NIPBLQ6KC79 2804 aaeCLIP13.78□□□□□ -0.2
APEX1-204ENST00000553368 HRNRQ86YZ3 2850 aaPredicted RBP13.78□□□□□ -0.2
APEX1-204ENST00000553368 MPDZO75970 2070 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 A0A1W2PR48 441 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 SUPT3HB4E1H0 165 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 H0YIV9 168 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 TMPRSS11DO60235 418 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 SUPT3HO75486 399 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 EEDO75530 441 aaKnown RBP13.78□□□□□ -0.2
APEX1-204ENST00000553368 SNX4O95219 450 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 LRATO95237 230 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 HPNP05981 417 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 SLC35E2P0CK97 266 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 EPB42P16452 691 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 PTX3P26022 381 aaPredicted RBP13.78□□□□□ -0.2
APEX1-204ENST00000553368 GDF1P27539 372 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 CDK9P50750 372 aaKnown RBP13.78□□□□□ -0.2
APEX1-204ENST00000553368 ZNF136P52737 540 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 WNT3P56703 355 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 RPS13P62277 151 aaKnown RBP13.78□□□□□ -0.2
APEX1-204ENST00000553368 ADAM8P78325 824 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 CUL3Q13618 768 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 DDX39BQ13838 428 aaKnown RBP13.78□□□□□ -0.2
APEX1-204ENST00000553368 NHSL2Q5HYW2 709 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 NSUN5P2Q63ZY6 315 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 VASNQ6EMK4 673 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 CMC1Q7Z7K0 106 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 PM20D2Q8IYS1 436 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 TAGAPQ8N103 731 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 TEX9Q8N6V9 391 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 SPPL2AQ8TCT8 520 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 DIO2Q92813 273 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 JSRP1Q96MG2 331 aaPredicted RBP13.78□□□□□ -0.2
APEX1-204ENST00000553368 MTERF1Q99551 399 aaKnown RBP13.78□□□□□ -0.2
APEX1-204ENST00000553368 ANGPTL4Q9BY76 406 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 PRM3Q9NNZ6 103 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 WHRNQ9P202 907 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 PCDHGA11Q9Y5H2 935 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 NPFFR2Q9Y5X5 522 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 SAR1BQ9Y6B6 198 aa13.78□□□□□ -0.2
APEX1-204ENST00000553368 C15orf38-AP3S2A0A0A6YYH1 394 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 C2orf92A0A1B0GVN3 265 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 CD8B2A6NJW9 211 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 CAPN14A8MX76 684 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 TP53I11O14683 189 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 OR10H2O60403 315 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 FAM155BO75949 473 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 ACSL3O95573 720 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 IL2RAP01589 272 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 LTA4HP09960 611 aaKnown RBP13.77□□□□□ -0.21
APEX1-204ENST00000553368 FAM58BPP0C7Q3 252 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 CRABP2P29373 138 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 PAFAH1B1P43034 410 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 MAP1AP78559 2803 aaPredicted RBP13.77□□□□□ -0.21
APEX1-204ENST00000553368 RPS6KA2Q15349 733 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 PAMR1Q6UXH9 720 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 TBC1D1Q86TI0 1168 aaPredicted RBP13.77□□□□□ -0.21
APEX1-204ENST00000553368 ZNF615Q8N8J6 731 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 RHEBL1Q8TAI7 183 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 WDR20Q8TBZ3 569 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 UCN3Q969E3 161 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 ADIPOR1Q96A54 375 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 NXNL1Q96CM4 212 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 HSPBAP1Q96EW2 488 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 ERP44Q9BS26 406 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 KCNF1Q9H3M0 494 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 GSX1Q9H4S2 264 aaPredicted RBP13.77□□□□□ -0.21
APEX1-204ENST00000553368 CXorf21Q9HAI6 301 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 SNX15Q9NRS6 342 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 JKAMPQ9P055 326 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 RNF14Q9UBS8 474 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 FETUBQ9UGM5 382 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 DNHD1Q96M86 4753 aa13.77□□□□□ -0.21
APEX1-204ENST00000553368 KIAA1549Q9HCM3 1950 aa13.76□□□□□ -0.21
APEX1-204ENST00000553368 A0A1W2PS29 197 aa13.76□□□□□ -0.21
APEX1-204ENST00000553368 MBD3L4A6NDZ8 208 aaPredicted RBP13.76□□□□□ -0.21
APEX1-204ENST00000553368 MBD3L3A6NE82 208 aaPredicted RBP13.76□□□□□ -0.21
APEX1-204ENST00000553368 FAM187AA6NFU0 413 aa13.76□□□□□ -0.21
APEX1-204ENST00000553368 MBD3L5A6NJ08 208 aaPredicted RBP13.76□□□□□ -0.21
APEX1-204ENST00000553368 GLOD5A6NK44 160 aa13.76□□□□□ -0.21
APEX1-204ENST00000553368 UGDHO60701 494 aa13.76□□□□□ -0.21
APEX1-204ENST00000553368 AIFM1O95831 613 aa13.76□□□□□ -0.21
APEX1-204ENST00000553368 CT62P0C5K7 136 aa13.76□□□□□ -0.21
APEX1-204ENST00000553368 NR2F6P10588 404 aa13.76□□□□□ -0.21
APEX1-204ENST00000553368 EPXP11678 715 aa13.76□□□□□ -0.21
APEX1-204ENST00000553368 TACR1P25103 407 aa13.76□□□□□ -0.21
APEX1-204ENST00000553368 SSTR4P31391 388 aa13.76□□□□□ -0.21
APEX1-204ENST00000553368 CASP3P42574 277 aa13.76□□□□□ -0.21
APEX1-204ENST00000553368 FBXW4P57775 412 aa13.76□□□□□ -0.21
APEX1-204ENST00000553368 MRPS25P82663 173 aaKnown RBP13.76□□□□□ -0.21
APEX1-204ENST00000553368 SORDQ00796 357 aa13.76□□□□□ -0.21
APEX1-204ENST00000553368 FUT7Q11130 342 aa13.76□□□□□ -0.21
APEX1-204ENST00000553368 SETDB1Q15047 1291 aa13.76□□□□□ -0.21
APEX1-204ENST00000553368 SF3B4Q15427 424 aaKnown RBP eCLIP13.76□□□□□ -0.211e-8■■■□□ 17.2
APEX1-204ENST00000553368 KBTBD12Q3ZCT8 623 aa13.76□□□□□ -0.21
APEX1-204ENST00000553368 BICRALQ6AI39 1079 aa13.76□□□□□ -0.21
APEX1-204ENST00000553368 TMEM64Q6YI46 380 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms