RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 ZNF71Q9NQZ8 489 aaPredicted RBP9.57□□□□□ -0.88
TRAFD1-208ENST00000552890 TMEM45AQ9NWC5 275 aa9.57□□□□□ -0.88
TRAFD1-208ENST00000552890 TEX10Q9NXF1 929 aaPredicted RBP9.57□□□□□ -0.88
TRAFD1-208ENST00000552890 TAS2R9Q9NYW1 312 aa9.57□□□□□ -0.88
TRAFD1-208ENST00000552890 MYOTQ9UBF9 498 aa9.57□□□□□ -0.88
TRAFD1-208ENST00000552890 CES1P1Q9UKY3 287 aa9.57□□□□□ -0.88
TRAFD1-208ENST00000552890 PCDHGB4Q9UN71 923 aa9.57□□□□□ -0.88
TRAFD1-208ENST00000552890 MED13Q9UHV7 2174 aa9.57□□□□□ -0.88
TRAFD1-208ENST00000552890 GLOD5A6NK44 160 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 KLRC4-KLRK1H3BQV0 150 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 DYNC1I1O14576 645 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 TP53I11O14683 189 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 PGRMC2O15173 223 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 PLOD3O60568 738 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 DDAH2O95865 285 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 IGKV3-11P04433 115 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 KRT16P08779 473 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 BCKDHAP12694 445 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 IDO1P14902 403 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 NAGAP17050 411 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 NT5EP21589 574 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 GPR143P51810 404 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 HNRNPFP52597 415 aaKnown RBP9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 PSMD4P55036 377 aaKnown RBP9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 MANFP55145 182 aaKnown RBP9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 MLF1P58340 268 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 RNF4P78317 190 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 TXNL4AP83876 142 aaKnown RBP9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 PRR5P85299 388 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 OC90Q02509 493 aaPredicted RBP9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 FUT7Q11130 342 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 MLC1Q15049 377 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 CEBPEQ15744 281 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 GSTA3Q16772 222 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 TBCELQ5QJ74 424 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 CPTPQ5TA50 214 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 ANXA8L1Q5VT79 327 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 ZCCHC12Q6PEW1 402 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 LINC00696Q6ZRV3 163 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 ATCAYQ86WG3 371 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 SIRT6Q8N6T7 355 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 ZNF781Q8N8C0 355 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 GOLM1Q8NBJ4 401 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 CDC26Q8NHZ8 85 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 AGR3Q8TD06 166 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 ASB15Q8WXK1 588 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 PSMF1Q92530 271 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 ARL8AQ96BM9 186 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 HSPBAP1Q96EW2 488 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 SECISBP2Q96T21 854 aaKnown RBP9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 NEUROD4Q9HD90 331 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 KLF13Q9Y2Y9 288 aaPredicted RBP9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 PCDHGB3Q9Y5G1 929 aa9.56□□□□□ -0.88
TRAFD1-208ENST00000552890 ATRXP46100 2492 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 NBEAQ8NFP9 2946 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 IGHV3-20A0A0C4DH32 117 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 C2orf92A0A1B0GVN3 265 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 TTLL8A6PVC2 850 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 GABRR3A8MPY1 467 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 A8MUA0 341 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 A8MVJ9 347 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 TCP11X1B4DZS4 312 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 PLOD2O00469 737 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 PDPK1O15530 556 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 SUV39H1O43463 412 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 DNAJB6O75190 326 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 PEX11AO75192 247 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 SKAP2O75563 359 aaPredicted RBP9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 CHN1P15882 459 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 KRT20P35900 424 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 TNFSF10P50591 281 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 SNRPNP63162 240 aaKnown RBP9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 RAE1P78406 368 aaKnown RBP9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 OCRLQ01968 901 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 Q0VFX4 171 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 PDCD2Q16342 344 aaPredicted RBP9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 RFTN2Q52LD8 501 aaPredicted RBP9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 TTMPQ5BVD1 217 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 IL23RQ5VWK5 629 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 PCSK4Q6UW60 755 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 SCIMPQ6UWF3 145 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 TICAM1Q8IUC6 712 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 OR4N5Q8IXE1 308 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 TMEM52Q8NDY8 209 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 ACTRT2Q8TDY3 377 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 EBPLQ9BY08 206 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 DPY30Q9C005 99 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 BRINP2Q9C0B6 783 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 BHLHE41Q9C0J9 482 aaPredicted RBP9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 OR10A5Q9H207 317 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 RABEP2Q9H5N1 569 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 CDCP1Q9H5V8 836 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 HPF1Q9NWY4 346 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 CNIH4Q9P003 139 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 SH3BP4Q9P0V3 963 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 ATP6V1HQ9UI12 483 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 TRIM33Q9UPN9 1127 aa9.55□□□□□ -0.88
TRAFD1-208ENST00000552890 ERVK-11Q9UQG0 969 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms